Class information for:
Level 2: REFERENCE GENES//GENORM//NORMFINDER

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2179 4941 31.4 80%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
2179 2             REFERENCE GENES//GENORM//NORMFINDER 4941
4517 1                   REFERENCE GENES//GENORM//NORMFINDER 1774
11368 1                   RNA AMPLIFICATION//LASER CAPTURE MICRODISSECTION//LASER MICRODISSECTION 987
11477 1                   FFPE//FORMALIN FIXED PARAFFIN EMBEDDED TISSUE//METHACARN 979
16568 1                   RNA ISOLATION//RNA EXTRACTION//DNA ISOLATION 647
20679 1                   BRAIN BANK//BRAIN DONATION//AGONAL STATE 449
34880 1                   TRIZOL//ALLEGRO//FUNCTIONAL INFORMATICS 105

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 REFERENCE GENES authKW 2595959 11% 81% 519
2 GENORM authKW 495075 2% 83% 96
3 NORMFINDER authKW 424803 2% 90% 76
4 HOUSEKEEPING GENES authKW 360081 3% 46% 128
5 RNA ISOLATION authKW 252675 2% 47% 87
6 HOUSEKEEPING GENE authKW 247892 2% 47% 85
7 RNA INTEGRITY authKW 184579 1% 85% 35
8 BESTKEEPER authKW 173755 1% 94% 30
9 RNA EXTRACTION authKW 158227 2% 32% 81
10 LASER CAPTURE MICRODISSECTION authKW 152341 3% 18% 136

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemical Research Methods 12727 18% 0% 865
2 Pathology 8235 12% 0% 595
3 Biochemistry & Molecular Biology 4961 29% 0% 1435
4 Biotechnology & Applied Microbiology 4381 14% 0% 681
5 Plant Sciences 1839 10% 0% 490
6 Genetics & Heredity 1692 9% 0% 445
7 Medical Laboratory Technology 1109 3% 0% 135
8 Cell Biology 526 7% 0% 363
9 Neurosciences 497 8% 0% 418
10 Oncology 307 6% 0% 311

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PATHOGENET UNIT 63401 1% 38% 27
2 CANC GENOME ANAT PROJECT 23250 0% 47% 8
3 BIOREPOSITORIES BIOSPECIMEN BRANCH 22236 0% 60% 6
4 NEW S WALES TISSUE OURCE 13899 0% 75% 3
5 MOL BIOL CORE SERV 12356 0% 100% 2
6 MURINE MICROARRAY AFFYMETRIX IL 12356 0% 100% 2
7 RUMENTAT DEV OURCE BIOENGN PHYS SC 12356 0% 100% 2
8 SPIDIA CONSORTIUM 12356 0% 100% 2
9 HORMONE RECEPTOR 11875 0% 38% 5
10 LASER MOL BIOL 11118 0% 60% 3

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BMC MOLECULAR BIOLOGY 68916 2% 12% 92
2 BIOTECHNIQUES 35045 4% 3% 186
3 DIAGNOSTIC MOLECULAR PATHOLOGY 25629 1% 7% 57
4 PLANT MOLECULAR BIOLOGY REPORTER 25004 2% 5% 75
5 BIOPRESERVATION AND BIOBANKING 17915 1% 9% 32
6 JOURNAL OF MOLECULAR DIAGNOSTICS 10417 1% 4% 44
7 MOLECULAR BIOTECHNOLOGY 7298 1% 3% 47
8 ANALYTICAL BIOCHEMISTRY 5379 3% 1% 129
9 CELL AND TISSUE BANKING 3961 0% 4% 18
10 PLANT METHODS 3281 0% 4% 15

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 REFERENCE GENES 2595959 11% 81% 519 Search REFERENCE+GENES Search REFERENCE+GENES
2 GENORM 495075 2% 83% 96 Search GENORM Search GENORM
3 NORMFINDER 424803 2% 90% 76 Search NORMFINDER Search NORMFINDER
4 HOUSEKEEPING GENES 360081 3% 46% 128 Search HOUSEKEEPING+GENES Search HOUSEKEEPING+GENES
5 RNA ISOLATION 252675 2% 47% 87 Search RNA+ISOLATION Search RNA+ISOLATION
6 HOUSEKEEPING GENE 247892 2% 47% 85 Search HOUSEKEEPING+GENE Search HOUSEKEEPING+GENE
7 RNA INTEGRITY 184579 1% 85% 35 Search RNA+INTEGRITY Search RNA+INTEGRITY
8 BESTKEEPER 173755 1% 94% 30 Search BESTKEEPER Search BESTKEEPER
9 RNA EXTRACTION 158227 2% 32% 81 Search RNA+EXTRACTION Search RNA+EXTRACTION
10 LASER CAPTURE MICRODISSECTION 152341 3% 18% 136 Search LASER+CAPTURE+MICRODISSECTION Search LASER+CAPTURE+MICRODISSECTION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KOZERA, B , RAPACZ, M , (2013) REFERENCE GENES IN REAL-TIME PCR.JOURNAL OF APPLIED GENETICS. VOL. 54. ISSUE 4. P. 391 -406 61 82% 102
2 CHAPMAN, JR , WALDENSTROM, J , (2015) WITH REFERENCE TO REFERENCE GENES: A SYSTEMATIC REVIEW OF ENDOGENOUS CONTROLS IN GENE EXPRESSION STUDIES.PLOS ONE. VOL. 10. ISSUE 11. P. - 69 91% 4
3 MA, R , XU, S , ZHAO, YC , XIA, B , WANG, R , (2016) SELECTION AND VALIDATION OF APPROPRIATE REFERENCE GENES FOR QUANTITATIVE REAL-TIME PCR ANALYSIS OF GENE EXPRESSION IN LYCORIS AUREA.FRONTIERS IN PLANT SCIENCE. VOL. 7. ISSUE . P. - 64 77% 2
4 REDDY, DS , BHATNAGAR-MATHUR, P , REDDY, PS , CINDHURI, KS , GANESH, AS , SHARMA, KK , (2016) IDENTIFICATION AND VALIDATION OF REFERENCE GENES AND THEIR IMPACT ON NORMALIZED GENE EXPRESSION STUDIES ACROSS CULTIVATED AND WILD CICER SPECIES.PLOS ONE. VOL. 11. ISSUE 2. P. - 52 88% 3
5 WANG, T , HAO, RJ , PAN, HT , CHENG, TR , ZHANG, QX , (2014) SELECTION OF SUITABLE REFERENCE GENES FOR QUANTITATIVE REAL-TIME POLYMERASE CHAIN REACTION IN PRUNUS MUME DURING FLOWERING STAGES AND UNDER DIFFERENT ABIOTIC STRESS CONDITIONS.JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE. VOL. 139. ISSUE 2. P. 113 -122 67 83% 5
6 BONIN, S , STANTA, G , (2013) NUCLEIC ACID EXTRACTION METHODS FROM FIXED AND PARAFFIN-EMBEDDED TISSUES IN CANCER DIAGNOSTICS.EXPERT REVIEW OF MOLECULAR DIAGNOSTICS. VOL. 13. ISSUE 3. P. 271 -282 65 82% 7
7 LEGRES, LG , JANIN, A , MASSELON, C , BERTHEAU, P , (2014) BEYOND LASER MICRODISSECTION TECHNOLOGY: FOLLOW THE YELLOW BRICK ROAD FOR CANCER RESEARCH.AMERICAN JOURNAL OF CANCER RESEARCH. VOL. 4. ISSUE 1. P. 1-28 93 53% 8
8 MANOLI, A , STURARO, A , TREVISAN, S , QUAGGIOTTI, S , NONIS, A , (2012) EVALUATION OF CANDIDATE REFERENCE GENES FOR QPCR IN MAIZE.JOURNAL OF PLANT PHYSIOLOGY. VOL. 169. ISSUE 8. P. 807 -815 51 88% 50
9 RUIJTER, JM , RAMAKERS, C , HOOGAARS, WMH , KARLEN, Y , BAKKER, O , VAN DEN HOFF, MJB , MOORMAN, AFM , (2009) AMPLIFICATION EFFICIENCY: LINKING BASELINE AND BIAS IN THE ANALYSIS OF QUANTITATIVE PCR DATA.NUCLEIC ACIDS RESEARCH. VOL. 37. ISSUE 6. P. - 27 93% 744
10 XIAO, XL , WU, XM , MA, JB , LI, PB , LI, TT , YAO, YA , (2015) SYSTEMATIC ASSESSMENT OF REFERENCE GENES FOR RT-QPCR ACROSS PLANT SPECIES UNDER SALT STRESS AND DROUGHT STRESS.ACTA PHYSIOLOGIAE PLANTARUM. VOL. 37. ISSUE 9. P. - 53 88% 1

Classes with closest relation at Level 2


Rank Class id link
1 2924 SAGE//SERIAL ANALYSIS OF GENE EXPRESSION//DIFFERENTIAL DISPLAY
2 1714 MOLECULAR BEACON//MUTATION DETECTION//SEQUENCING BY HYBRIDIZATION
3 2029 ANTIGEN RETRIEVAL//IN VIVO CRYOTECHNIQUE//AVTOMATIKA
4 3046 PROGRAM TRANSLAT IMMUNOVIROL BIODEF//MAYO VACCINE GRP//SEPSIS
5 1101 BIOINFORMATICS//COPY NUMBER VARIATION//NEXT GENERATION SEQUENCING
6 2982 GMO//GENETICALLY MODIFIED ORGANISMS//GMO DETECTION
7 868 BMC BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS
8 652 HER2//TRASTUZUMAB//HER 2 NEU
9 57 MICRORNA//MIRNA//LONG NONCODING RNAS
10 2310 DNA BARCODING//SPECIES IDENTIFICATION//BIO ERS ONTARIO

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