Class information for:
Level 1: REFERENCE GENES//GENORM//NORMFINDER

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
4517 1774 35.0 86%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
2179 2             REFERENCE GENES//GENORM//NORMFINDER 4941
4517 1                   REFERENCE GENES//GENORM//NORMFINDER 1774

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 REFERENCE GENES authKW 7038413 29% 80% 512
2 GENORM authKW 1379241 5% 83% 96
3 NORMFINDER authKW 1183445 4% 90% 76
4 HOUSEKEEPING GENES authKW 926498 7% 44% 123
5 HOUSEKEEPING GENE authKW 690740 5% 47% 85
6 BESTKEEPER authKW 484055 2% 94% 30
7 NORMALIZATION authKW 381349 11% 12% 191
8 INTERNAL CONTROL GENE authKW 381286 1% 92% 24
9 RT QPCR authKW 309778 6% 16% 113
10 EXPRESSION STABILITY authKW 168659 1% 70% 14

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 3388 15% 0% 270
2 Biochemistry & Molecular Biology 3005 36% 0% 640
3 Biotechnology & Applied Microbiology 1935 15% 0% 268
4 Plant Sciences 1683 15% 0% 262
5 Genetics & Heredity 1161 12% 0% 210
6 Mathematical & Computational Biology 447 3% 0% 57
7 Multidisciplinary Sciences 375 3% 0% 48
8 Horticulture 237 2% 0% 38
9 Agriculture, Dairy & Animal Science 162 3% 0% 48
10 Entomology 138 3% 0% 46

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOL BIOL CORE SERV 34422 0% 100% 2
2 CLIN INTERNAL MED ONCOL HEMATOL 2 22947 0% 67% 2
3 AGRGENOM MINIST EDUC 17211 0% 100% 1
4 ANATOMY EMBRYOL PHYSIOL 17211 0% 100% 1
5 AZIENDA UNIV POLICLIN AOUREG REFERENCE TRANS 17211 0% 100% 1
6 BEIJING AGR GENE OURCE BIOTECHNOL 17211 0% 100% 1
7 BIOL EARTH SIENCES 17211 0% 100% 1
8 BIOL GENET BREEDING MAIZE SOUTHWEST CHI 17211 0% 100% 1
9 BIOL GENET IMPROVEMENT HORT CROPS E CHI 17211 0% 100% 1
10 BIOL VEGETAL IB 17211 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BMC MOLECULAR BIOLOGY 156479 5% 11% 83
2 BIOTECHNIQUES 6748 3% 1% 49
3 PLOS ONE 4643 12% 0% 221
4 ANALYTICAL BIOCHEMISTRY 3502 3% 0% 62
5 PLANT MOLECULAR BIOLOGY REPORTER 3157 1% 1% 16
6 MOLECULAR AND CELLULAR PROBES 2569 1% 1% 16
7 FRONTIERS IN PLANT SCIENCE 2492 2% 1% 27
8 MOLECULAR BIOLOGY REPORTS 2095 2% 0% 27
9 MOLECULAR BIOTECHNOLOGY 1549 1% 1% 13
10 PHYSIOLOGICAL GENOMICS 1315 1% 1% 12

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 REFERENCE GENES 7038413 29% 80% 512 Search REFERENCE+GENES Search REFERENCE+GENES
2 GENORM 1379241 5% 83% 96 Search GENORM Search GENORM
3 NORMFINDER 1183445 4% 90% 76 Search NORMFINDER Search NORMFINDER
4 HOUSEKEEPING GENES 926498 7% 44% 123 Search HOUSEKEEPING+GENES Search HOUSEKEEPING+GENES
5 HOUSEKEEPING GENE 690740 5% 47% 85 Search HOUSEKEEPING+GENE Search HOUSEKEEPING+GENE
6 BESTKEEPER 484055 2% 94% 30 Search BESTKEEPER Search BESTKEEPER
7 NORMALIZATION 381349 11% 12% 191 Search NORMALIZATION Search NORMALIZATION
8 INTERNAL CONTROL GENE 381286 1% 92% 24 Search INTERNAL+CONTROL+GENE Search INTERNAL+CONTROL+GENE
9 RT QPCR 309778 6% 16% 113 Search RT+QPCR Search RT+QPCR
10 EXPRESSION STABILITY 168659 1% 70% 14 Search EXPRESSION+STABILITY Search EXPRESSION+STABILITY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KOZERA, B , RAPACZ, M , (2013) REFERENCE GENES IN REAL-TIME PCR.JOURNAL OF APPLIED GENETICS. VOL. 54. ISSUE 4. P. 391 -406 61 82% 102
2 CHAPMAN, JR , WALDENSTROM, J , (2015) WITH REFERENCE TO REFERENCE GENES: A SYSTEMATIC REVIEW OF ENDOGENOUS CONTROLS IN GENE EXPRESSION STUDIES.PLOS ONE. VOL. 10. ISSUE 11. P. - 69 91% 4
3 MA, R , XU, S , ZHAO, YC , XIA, B , WANG, R , (2016) SELECTION AND VALIDATION OF APPROPRIATE REFERENCE GENES FOR QUANTITATIVE REAL-TIME PCR ANALYSIS OF GENE EXPRESSION IN LYCORIS AUREA.FRONTIERS IN PLANT SCIENCE. VOL. 7. ISSUE . P. - 64 77% 2
4 REDDY, DS , BHATNAGAR-MATHUR, P , REDDY, PS , CINDHURI, KS , GANESH, AS , SHARMA, KK , (2016) IDENTIFICATION AND VALIDATION OF REFERENCE GENES AND THEIR IMPACT ON NORMALIZED GENE EXPRESSION STUDIES ACROSS CULTIVATED AND WILD CICER SPECIES.PLOS ONE. VOL. 11. ISSUE 2. P. - 52 88% 3
5 WANG, T , HAO, RJ , PAN, HT , CHENG, TR , ZHANG, QX , (2014) SELECTION OF SUITABLE REFERENCE GENES FOR QUANTITATIVE REAL-TIME POLYMERASE CHAIN REACTION IN PRUNUS MUME DURING FLOWERING STAGES AND UNDER DIFFERENT ABIOTIC STRESS CONDITIONS.JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE. VOL. 139. ISSUE 2. P. 113 -122 67 83% 5
6 MANOLI, A , STURARO, A , TREVISAN, S , QUAGGIOTTI, S , NONIS, A , (2012) EVALUATION OF CANDIDATE REFERENCE GENES FOR QPCR IN MAIZE.JOURNAL OF PLANT PHYSIOLOGY. VOL. 169. ISSUE 8. P. 807 -815 51 88% 50
7 RUIJTER, JM , RAMAKERS, C , HOOGAARS, WMH , KARLEN, Y , BAKKER, O , VAN DEN HOFF, MJB , MOORMAN, AFM , (2009) AMPLIFICATION EFFICIENCY: LINKING BASELINE AND BIAS IN THE ANALYSIS OF QUANTITATIVE PCR DATA.NUCLEIC ACIDS RESEARCH. VOL. 37. ISSUE 6. P. - 27 93% 744
8 XIAO, XL , WU, XM , MA, JB , LI, PB , LI, TT , YAO, YA , (2015) SYSTEMATIC ASSESSMENT OF REFERENCE GENES FOR RT-QPCR ACROSS PLANT SPECIES UNDER SALT STRESS AND DROUGHT STRESS.ACTA PHYSIOLOGIAE PLANTARUM. VOL. 37. ISSUE 9. P. - 53 88% 1
9 PODEVIN, N , KRAUSS, A , HENRY, I , SWENNEN, R , REMY, S , (2012) SELECTION AND VALIDATION OF REFERENCE GENES FOR QUANTITATIVE RT-PCR EXPRESSION STUDIES OF THE NON-MODEL CROP MUSA.MOLECULAR BREEDING. VOL. 30. ISSUE 3. P. 1237-1252 57 78% 27
10 LI, W , QIAN, YQ , HAN, L , LIU, JX , SUN, ZY , (2014) IDENTIFICATION OF SUITABLE REFERENCE GENES IN BUFFALO GRASS FOR ACCURATE TRANSCRIPT NORMALIZATION UNDER VARIOUS ABIOTIC STRESS CONDITIONS.GENE. VOL. 547. ISSUE 1. P. 55 -62 46 92% 11

Classes with closest relation at Level 1


Rank Class id link
1 27287 DIGITAL PCR//DROPLET DIGITAL PCR//ACTIVITY BASED BIOMARKERS
2 11477 FFPE//FORMALIN FIXED PARAFFIN EMBEDDED TISSUE//METHACARN
3 19509 BIOBANK OCCUPAT ENVIRONM MED//FONDAMENTAL//BLOOD TRANSCRIPTOME
4 12480 MOLECULAR BEACON//IN VIVO HYBRIDIZATION//RNA IMAGING
5 13063 GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE//GAPDH//D GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE
6 22884 SID 1//SYSTEMIC RNAI//DNA INSECTICIDES
7 34880 TRIZOL//ALLEGRO//FUNCTIONAL INFORMATICS
8 22511 GC RICH DNA//HOT START//AU GOLD NANOPARTICLES
9 19974 SINGLE CELL RNA SEQ//SINGLE CELL RNA SEQUENCING//SINGLE CELL TRANSCRIPTOMICS
10 31559 DAIRY COW MAMMARY EPITHELIAL CELLS//CROSS KINGDOM REGULATION//IMMUNE RELATED MIRNAS

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