Class information for:
Level 1: H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
8709 1226 44.1 80%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
371 2             RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY 17271
8709 1                   H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN 1226

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 H NS authKW 852971 6% 50% 68
2 HISTONE LIKE PROTEIN authKW 720401 4% 59% 49
3 NUCLEOID ASSOCIATED PROTEIN authKW 355968 2% 53% 27
4 HU PROTEIN authKW 310010 2% 66% 19
5 INTEGRATION HOST FACTOR authKW 300610 2% 46% 26
6 BACTERIAL CHROMATIN authKW 249049 1% 100% 10
7 PHYSIOL BACTERIENNE address 247578 1% 76% 13
8 HHA authKW 203378 1% 58% 14
9 IHF authKW 196477 2% 33% 24
10 HU authKW 195184 2% 29% 27

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 7789 34% 0% 413
2 Biochemistry & Molecular Biology 7487 64% 0% 779
3 Biophysics 1155 12% 0% 147
4 Genetics & Heredity 337 8% 0% 101
5 Cell Biology 277 10% 0% 118
6 CYTOLOGY & HISTOLOGY 45 0% 0% 4
7 Biology 37 2% 0% 28
8 Biochemical Research Methods 23 2% 0% 30
9 Biotechnology & Applied Microbiology 7 3% 0% 32
10 Crystallography 6 1% 0% 16

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHYSIOL BACTERIENNE 247578 1% 76% 13
2 LEIDEN CHEM CELL OBSERV 174334 1% 100% 7
3 PROGRAM BIOTECHNOL BIOENGN 68961 0% 46% 6
4 CNRS URA 409 49810 0% 100% 2
5 PROGRAM BIOTECHNOL SCI ENGN 49810 0% 100% 2
6 CELL OBSERV 44826 0% 60% 3
7 MOYNE PREVENT MED 37865 2% 7% 22
8 FRE2326 33205 0% 67% 2
9 PLASMA MEMBRANE NUCL SIGNALING 28803 1% 13% 9
10 AGR GENETHIGASHI KU 24905 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR MICROBIOLOGY 14029 7% 1% 82
2 JOURNAL OF BACTERIOLOGY 12805 11% 0% 131
3 JOURNAL OF MOLECULAR BIOLOGY 6758 7% 0% 80
4 BIOCHIMIE 2992 2% 0% 27
5 EXTREMOPHILES 2955 1% 1% 13
6 NUCLEIC ACIDS RESEARCH 2417 5% 0% 63
7 CURRENT OPINION IN MICROBIOLOGY 1941 1% 1% 12
8 PLASMID 1469 1% 1% 11
9 FEMS MICROBIOLOGY LETTERS 1187 2% 0% 28
10 BIOCHEMISTRY 1140 4% 0% 51

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 H NS 852971 6% 50% 68 Search H+NS Search H+NS
2 HISTONE LIKE PROTEIN 720401 4% 59% 49 Search HISTONE+LIKE+PROTEIN Search HISTONE+LIKE+PROTEIN
3 NUCLEOID ASSOCIATED PROTEIN 355968 2% 53% 27 Search NUCLEOID+ASSOCIATED+PROTEIN Search NUCLEOID+ASSOCIATED+PROTEIN
4 HU PROTEIN 310010 2% 66% 19 Search HU+PROTEIN Search HU+PROTEIN
5 INTEGRATION HOST FACTOR 300610 2% 46% 26 Search INTEGRATION+HOST+FACTOR Search INTEGRATION+HOST+FACTOR
6 BACTERIAL CHROMATIN 249049 1% 100% 10 Search BACTERIAL+CHROMATIN Search BACTERIAL+CHROMATIN
7 HHA 203378 1% 58% 14 Search HHA Search HHA
8 IHF 196477 2% 33% 24 Search IHF Search IHF
9 HU 195184 2% 29% 27 Search HU Search HU
10 H NS PROTEIN 149429 0% 100% 6 Search H+NS+PROTEIN Search H+NS+PROTEIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 GROVE, A , (2011) FUNCTIONAL EVOLUTION OF BACTERIAL HISTONE-LIKE HU PROTEINS.CURRENT ISSUES IN MOLECULAR BIOLOGY. VOL. 13. ISSUE 1. P. 1 -11 75 72% 36
2 DORMAN, CJ , (2014) H-NS-LIKE NUCLEOID-ASSOCIATED PROTEINS, MOBILE GENETIC ELEMENTS AND HORIZONTAL GENE TRANSFER IN BACTERIA.PLASMID. VOL. 75. ISSUE . P. 1 -11 76 53% 17
3 DORMAN, CJ , (2004) H-NS: A UNIVERSAL REGULATOR FOR A DYNAMIC GENOME.NATURE REVIEWS MICROBIOLOGY. VOL. 2. ISSUE 5. P. 391-400 66 63% 302
4 SWINGER, KK , RICE, PA , (2004) IHF AND HU: FLEXIBLE ARCHITECTS OF BENT DNA.CURRENT OPINION IN STRUCTURAL BIOLOGY. VOL. 14. ISSUE 1. P. 28-35 51 85% 188
5 ZHANG, ZF , GUO, L , HUANG, L , (2012) ARCHAEAL CHROMATIN PROTEINS.SCIENCE CHINA-LIFE SCIENCES. VOL. 55. ISSUE 5. P. 377-385 51 82% 10
6 WINARDHI, RS , YAN, J , KENNEY, LJ , (2015) H-NS REGULATES GENE EXPRESSION AND COMPACTS THE NUCLEOID: INSIGHTS FROM SINGLE-MOLECULE EXPERIMENTS.BIOPHYSICAL JOURNAL. VOL. 109. ISSUE 7. P. 1321 -1329 47 76% 6
7 SINGH, K , MILSTEIN, JN , NAVARRE, WW , (2016) XENOGENEIC SILENCING AND ITS IMPACT ON BACTERIAL GENOMES.ANNUAL REVIEW OF MICROBIOLOGY, VOL 70. VOL. 70. ISSUE . P. 199 -213 55 65% 1
8 NAVARRE, WW , MCCLELLAND, M , LIBBY, SJ , FANG, FC , (2007) SILENCING OF XENOGENEIC DNA BY H-NS - FACILITATION OF LATERAL GENE TRANSFER IN BACTERIA BY A DEFENSE SYSTEM THAT RECOGNIZES FOREIGN DNA.GENES & DEVELOPMENT. VOL. 21. ISSUE 12. P. 1456 -1471 82 46% 123
9 SHINTANI, M , SUZUKI-MINAKUCHI, C , NOJIRI, H , (2015) NUCLEOID-ASSOCIATED PROTEINS ENCODED ON PLASMIDS: OCCURRENCE AND MODE OF FUNCTION.PLASMID. VOL. 80. ISSUE . P. 32 -44 61 59% 4
10 LANDICK, R , WADE, JT , GRAINGER, DC , (2015) H-NS AND RNA POLYMERASE: A LOVE-HATE RELATIONSHIP?.CURRENT OPINION IN MICROBIOLOGY. VOL. 24. ISSUE . P. 53 -59 42 76% 6

Classes with closest relation at Level 1


Rank Class id link
1 24529 AIST TSUKUBA 6 10//LEUCINE RESPONSIVE REGULATORY PROTEIN//FFRP
2 9979 DNA SEGREGATION//FTSK//PARB
3 13204 PPGPP//STRINGENT RESPONSE//PPPGPP
4 6168 DNA GYRASE//GYRASE//REVERSE GYRASE
5 13486 RPOS//CURLI//UVI31
6 7535 SITE SPECIFIC RECOMBINATION//SERINE RECOMBINASE//PHIC31 INTEGRASE
7 8862 ORIC//DNAA//DNAA PROTEIN
8 32149 MINIATURE INSERTION SEQUENCE//REPEATED DNA FAMILIES//AVENTIS UMR 1889
9 4021 DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE
10 6241 LAC REPRESSOR//TRP REPRESSOR//LACTOSE REPRESSOR

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