Class information for:
Level 1: MINIATURE INSERTION SEQUENCE//REPEATED DNA FAMILIES//AVENTIS UMR 1889

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
32149 143 38.2 82%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
3063 2             DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE 2429
32149 1                   MINIATURE INSERTION SEQUENCE//REPEATED DNA FAMILIES//AVENTIS UMR 1889 143

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MINIATURE INSERTION SEQUENCE authKW 427070 1% 100% 2
2 REPEATED DNA FAMILIES authKW 284712 1% 67% 2
3 AVENTIS UMR 1889 address 213535 1% 100% 1
4 BACTERIAL INTERSPERSED MOSAIC ELEMENTS BIMES authKW 213535 1% 100% 1
5 BIMES authKW 213535 1% 100% 1
6 BIOL SCIDANA DAVID DORNSIFE LETTERS address 213535 1% 100% 1
7 CLASS 2 TRANSPOSON authKW 213535 1% 100% 1
8 CYANOBACTERIAL GENOMES authKW 213535 1% 100% 1
9 DBBM DIPARTIMENTO BIOL PATOL CELLULARE MOL address 213535 1% 100% 1
10 DBPCM DIPARTIMENTO BIOL PATOL CELLULARE MOL address 213535 1% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 1752 46% 0% 66
2 Genetics & Heredity 360 22% 0% 31
3 Biochemistry & Molecular Biology 194 33% 0% 47
4 Biotechnology & Applied Microbiology 179 16% 0% 23
5 Evolutionary Biology 32 3% 0% 5
6 Cell Biology 6 6% 0% 8
7 Veterinary Sciences 3 3% 0% 4
8 Integrative & Complementary Medicine 3 1% 0% 1
9 Biophysics 3 3% 0% 4
10 Gastroenterology & Hepatology 2 2% 0% 3

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AVENTIS UMR 1889 213535 1% 100% 1
2 BIOL SCIDANA DAVID DORNSIFE LETTERS 213535 1% 100% 1
3 DBBM DIPARTIMENTO BIOL PATOL CELLULARE MOL 213535 1% 100% 1
4 DBPCM DIPARTIMENTO BIOL PATOL CELLULARE MOL 213535 1% 100% 1
5 DIPARTIMENTO BIOL PATOL CELLULAIRE 213535 1% 100% 1
6 DIPARTIMENTO BIUOL PATOL CELLULARE MOL L CALI 213535 1% 100% 1
7 PROGRAMMAT MOL TOXICOL GENET 213535 1% 100% 1
8 BIC GRANADA 106767 1% 50% 1
9 URA 1444 96086 2% 15% 3
10 UNITE PROGRAMMAT MOL TOXICOL GENET 85407 3% 10% 4

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RESEARCH IN MICROBIOLOGY 3964 5% 0% 7
2 BMC GENOMICS 1799 6% 0% 9
3 BOLETIM DO CENTRO DE PESQUISA DE PROCESSAMENTO DE ALIMENTOS 1628 1% 1% 1
4 ASIA-PACIFIC JOURNAL OF MOLECULAR BIOLOGY AND BIOTECHNOLOGY 1412 1% 1% 1
5 DNA RESEARCH 1339 1% 0% 2
6 JOURNAL OF BACTERIOLOGY 1252 10% 0% 14
7 MOLECULAR MICROBIOLOGY 1142 6% 0% 8
8 MOLECULAR GENETICS MICROBIOLOGY AND VIROLOGY 807 1% 0% 1
9 ANNALES DE L INSTITUT PASTEUR-MICROBIOLOGIE 780 1% 0% 1
10 BIOTECHFORUM ( BTF ) 738 2% 0% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MINIATURE INSERTION SEQUENCE 427070 1% 100% 2 Search MINIATURE+INSERTION+SEQUENCE Search MINIATURE+INSERTION+SEQUENCE
2 REPEATED DNA FAMILIES 284712 1% 67% 2 Search REPEATED+DNA+FAMILIES Search REPEATED+DNA+FAMILIES
3 BACTERIAL INTERSPERSED MOSAIC ELEMENTS BIMES 213535 1% 100% 1 Search BACTERIAL+INTERSPERSED+MOSAIC+ELEMENTS+BIMES Search BACTERIAL+INTERSPERSED+MOSAIC+ELEMENTS+BIMES
4 BIMES 213535 1% 100% 1 Search BIMES Search BIMES
5 CLASS 2 TRANSPOSON 213535 1% 100% 1 Search CLASS+2+TRANSPOSON Search CLASS+2+TRANSPOSON
6 CYANOBACTERIAL GENOMES 213535 1% 100% 1 Search CYANOBACTERIAL+GENOMES Search CYANOBACTERIAL+GENOMES
7 DNA FINGERPRINTING ERIC ENTEROBACTERIAL REPETITIVE INTERGENIC CONSENSUS SEQUENCE 213535 1% 100% 1 Search DNA+FINGERPRINTING+ERIC+ENTEROBACTERIAL+REPETITIVE+INTERGENIC+CONSENSUS+SEQUENCE Search DNA+FINGERPRINTING+ERIC+ENTEROBACTERIAL+REPETITIVE+INTERGENIC+CONSENSUS+SEQUENCE
8 DNA INSERTION SEQUENCE 213535 1% 100% 1 Search DNA+INSERTION+SEQUENCE Search DNA+INSERTION+SEQUENCE
9 ENZYME FITNESS 213535 1% 100% 1 Search ENZYME+FITNESS Search ENZYME+FITNESS
10 ERIC SEQUENCES 213535 1% 100% 1 Search ERIC+SEQUENCES Search ERIC+SEQUENCES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 DI NOCERA, PP , DE GREGORIO, E , ROCCO, F , (2013) GTAG- AND CGTC-TAGGED PALINDROMIC DNA REPEATS IN PROKARYOTES.BMC GENOMICS. VOL. 14. ISSUE . P. - 27 46% 2
2 DELIHAS, N , (2011) IMPACT OF SMALL REPEAT SEQUENCES ON BACTERIAL GENOME EVOLUTION.GENOME BIOLOGY AND EVOLUTION. VOL. 3. ISSUE . P. 959 -973 34 34% 29
3 NUNVAR, J , HUCKOVA, T , LICHA, I , (2010) IDENTIFICATION AND CHARACTERIZATION OF REPETITIVE EXTRAGENIC PALINDROMES (REP)-ASSOCIATED TYROSINE TRANSPOSASES: IMPLICATIONS FOR REP EVOLUTION AND DYNAMICS IN BACTERIAL GENOMES.BMC GENOMICS. VOL. 11. ISSUE . P. - 19 56% 19
4 DELIHAS, N , (2008) SMALL MOBILE SEQUENCES IN BACTERIA DISPLAY DIVERSE STRUCTURE/FUNCTION MOTIFS.MOLECULAR MICROBIOLOGY. VOL. 67. ISSUE 3. P. 475 -481 16 67% 40
5 BACHELLIER, S , SAURIN, W , PERRIN, D , HOFNUNG, M , GILSON, E , (1994) STRUCTURAL AND FUNCTIONAL DIVERSITY AMONG BACTERIAL INTERSPERSED MOSAIC ELEMENTS (BIMES).MOLECULAR MICROBIOLOGY. VOL. 12. ISSUE 1. P. 61-70 23 66% 33
6 BACHELLIER, S , CLEMENT, JM , HOFNUNG, M , (1999) SHORT PALINDROMIC REPETITIVE DNA ELEMENTS IN ENTEROBACTERIA: A SURVEY.RESEARCH IN MICROBIOLOGY. VOL. 150. ISSUE 9-10. P. 627 -639 21 55% 66
7 NUNVAR, J , LICHA, I , SCHNEIDER, B , (2013) EVOLUTION OF REP DIVERSITY: A COMPARATIVE STUDY.BMC GENOMICS. VOL. 14. ISSUE . P. - 16 53% 1
8 ILYINA, TS , (2010) MINIATURE REPETITIVE MOBILE ELEMENTS OF BACTERIA: STRUCTURAL ORGANIZATION AND PROPERTIES.MOLECULAR GENETICS MICROBIOLOGY AND VIROLOGY. VOL. 25. ISSUE 4. P. 139-147 22 42% 2
9 TON-HOANG, B , SIGUIER, P , QUENTIN, Y , ONILLON, S , MARTY, B , FICHANT, G , CHANDLER, M , (2012) STRUCTURING THE BACTERIAL GENOME: Y1-TRANSPOSASES ASSOCIATED WITH REP-BIME SEQUENCES.NUCLEIC ACIDS RESEARCH. VOL. 40. ISSUE 8. P. 3596-3609 19 43% 11
10 TOBES, R , PAREJA, E , (2005) REPETITIVE EXTRAGENIC PALINDROMIC SEQUENCES IN THE PSEUDOMONAS SYRINGAE PV. TOMATO DC3000 GENOME: EXTRAGENIC SIGNALS FOR GENOME REANNOTATION.RESEARCH IN MICROBIOLOGY. VOL. 156. ISSUE 3. P. 424-433 15 63% 18

Classes with closest relation at Level 1


Rank Class id link
1 4021 DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE
2 19654 TN10 PRECISE EXCISION//PARTIAL TRISOMY 11Q//EMANUEL SYNDROME
3 6760 RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME
4 32602 KAUFFMANN WHITE SCHEME//I CEUI//HMU UCFM INFECT GENOM
5 14395 OSCILLATORIALES//CYANOBACTERIA//CHROOCOCCALES
6 16509 TYRR//LONG ACCURATE PCR//BACILLUS SUBTILIS GENOME SEQUENCING
7 36964 ANASA TRISTIS//SQUASH BUG//AGROCHEMICAL PRODUCTS
8 3751 NEISSERIA GONORRHOEAE//INFEKT BIOL ABT//NEISSERIA MENINGITIDIS
9 21303 ARTIFICIAL TRANSFORMATION//E COLI COMPETENCE//SXY
10 8709 H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN

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