Class information for: |
Basic class information |
| Class id | #P | Avg. number of references |
Database coverage of references |
|---|---|---|---|
| 13204 | 854 | 45.6 | 67% |
Hierarchy of classes |
The table includes all classes above and classes immediately below the current class. |
| Cluster id | Level | Cluster label | #P |
|---|---|---|---|
| 7 | 4 | INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY | 1353914 |
| 33 | 3 | JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY | 107033 |
| 371 | 2 | RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY | 17271 |
| 13204 | 1 | PPGPP//STRINGENT RESPONSE//PPPGPP | 854 |
Terms with highest relevance score |
| rank | Term | termType | Chi square | Shr. of publ. in class containing term |
Class's shr. of term's tot. occurrences |
#P with term in class |
|---|---|---|---|---|---|---|
| 1 | PPGPP | authKW | 1248383 | 8% | 54% | 65 |
| 2 | STRINGENT RESPONSE | authKW | 875334 | 7% | 39% | 62 |
| 3 | PPPGPP | authKW | 472830 | 3% | 58% | 23 |
| 4 | FIS | authKW | 436982 | 4% | 33% | 37 |
| 5 | DKSA | authKW | 302114 | 2% | 65% | 13 |
| 6 | STRINGENT CONTROL | authKW | 214513 | 1% | 50% | 12 |
| 7 | FACTOR FOR INVERSION STIMULATION | authKW | 178771 | 1% | 100% | 5 |
| 8 | RELA | authKW | 113067 | 3% | 14% | 22 |
| 9 | GROWTH RATE DEPENDENT REGULATION | authKW | 107263 | 0% | 100% | 3 |
| 10 | UNIV HOSP AREA | address | 99313 | 1% | 56% | 5 |
Web of Science journal categories |
| Rank | Term | Chi square | Shr. of publ. in class containing term |
Class's shr. of term's tot. occurrences |
#P with term in class |
|---|---|---|---|---|---|
| 1 | Microbiology | 9594 | 44% | 0% | 378 |
| 2 | Biochemistry & Molecular Biology | 3834 | 55% | 0% | 472 |
| 3 | Cell Biology | 273 | 11% | 0% | 94 |
| 4 | Genetics & Heredity | 200 | 8% | 0% | 66 |
| 5 | Biotechnology & Applied Microbiology | 124 | 7% | 0% | 56 |
| 6 | Biophysics | 95 | 5% | 0% | 42 |
| 7 | Biology | 5 | 1% | 0% | 12 |
| 8 | Biochemical Research Methods | 2 | 2% | 0% | 13 |
| 9 | Infectious Diseases | 1 | 1% | 0% | 10 |
| 10 | Developmental Biology | 1 | 1% | 0% | 5 |
Address terms |
| Rank | Term | Chi square | Shr. of publ. in class containing term |
Class's shr. of term's tot. occurrences |
#P with term in class |
|---|---|---|---|---|---|
| 1 | UNIV HOSP AREA | 99313 | 1% | 56% | 5 |
| 2 | BACTERIOL 1550 LINDEN DR | 35754 | 0% | 100% | 1 |
| 3 | BIOL VEGETALE MICROBIOL ENVIRONM UMR 7265 | 35754 | 0% | 100% | 1 |
| 4 | BIOMOL ENGN CELL FREE SCI | 35754 | 0% | 100% | 1 |
| 5 | FOOD ANIM TECHNOL | 35754 | 0% | 100% | 1 |
| 6 | HIGH TECH AGR | 35754 | 0% | 100% | 1 |
| 7 | IFR ICORE 146EA956 | 35754 | 0% | 100% | 1 |
| 8 | MOL GENET PHYS COMPLEX SYST | 35754 | 0% | 100% | 1 |
| 9 | MRCS AFRICAN MED | 35754 | 0% | 100% | 1 |
| 10 | REGULAT CHROMOSOME BIOL | 35754 | 0% | 100% | 1 |
Journals |
| Rank | Term | Chi square | Shr. of publ. in class containing term |
Class's shr. of term's tot. occurrences |
#P with term in class |
|---|---|---|---|---|---|
| 1 | JOURNAL OF BACTERIOLOGY | 26628 | 18% | 0% | 157 |
| 2 | MOLECULAR MICROBIOLOGY | 11524 | 7% | 1% | 62 |
| 3 | MOLECULAR AND GENERAL GENETICS | 2384 | 2% | 0% | 18 |
| 4 | JOURNAL OF MOLECULAR BIOLOGY | 2051 | 4% | 0% | 37 |
| 5 | ZEITSCHRIFT FUR ALLGEMEINE MIKROBIOLOGIE | 1526 | 0% | 1% | 4 |
| 6 | MOLECULAR & GENERAL GENETICS | 1177 | 1% | 0% | 9 |
| 7 | CELL NUCLEUS | 1151 | 0% | 3% | 1 |
| 8 | NUCLEIC ACIDS RESEARCH | 1057 | 4% | 0% | 35 |
| 9 | EMBO JOURNAL | 978 | 3% | 0% | 22 |
| 10 | JOURNAL OF BIOLOGICAL CHEMISTRY | 911 | 8% | 0% | 65 |
Author Key Words |
| Rank | Term | Chi square | Shr. of publ. in class containing term |
Class's shr. of term's tot. occurrences |
#P with term in class |
LCSH search | Wikipedia search |
|---|---|---|---|---|---|---|---|
| 1 | PPGPP | 1248383 | 8% | 54% | 65 | Search PPGPP | Search PPGPP |
| 2 | STRINGENT RESPONSE | 875334 | 7% | 39% | 62 | Search STRINGENT+RESPONSE | Search STRINGENT+RESPONSE |
| 3 | PPPGPP | 472830 | 3% | 58% | 23 | Search PPPGPP | Search PPPGPP |
| 4 | FIS | 436982 | 4% | 33% | 37 | Search FIS | Search FIS |
| 5 | DKSA | 302114 | 2% | 65% | 13 | Search DKSA | Search DKSA |
| 6 | STRINGENT CONTROL | 214513 | 1% | 50% | 12 | Search STRINGENT+CONTROL | Search STRINGENT+CONTROL |
| 7 | FACTOR FOR INVERSION STIMULATION | 178771 | 1% | 100% | 5 | Search FACTOR+FOR+INVERSION+STIMULATION | Search FACTOR+FOR+INVERSION+STIMULATION |
| 8 | RELA | 113067 | 3% | 14% | 22 | Search RELA | Search RELA |
| 9 | GROWTH RATE DEPENDENT REGULATION | 107263 | 0% | 100% | 3 | Search GROWTH+RATE+DEPENDENT+REGULATION | Search GROWTH+RATE+DEPENDENT+REGULATION |
| 10 | DNA MICROLOOPS | 71508 | 0% | 100% | 2 | Search DNA+MICROLOOPS | Search DNA+MICROLOOPS |
Core articles |
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c: (1) Number of references referring to publications in the class. (2) Share of total number of active references referring to publications in the class. (3) Age of the article. New articles get higher score than old articles. (4) Citation rate, normalized to year. |
| Rank | Reference | # ref. in cl. |
Shr. of ref. in cl. |
Citations |
|---|---|---|---|---|
| 1 | POTRYKUS, K , CASHEL, M , (2008) (P)PPGPP: STILL MAGICAL?.ANNUAL REVIEW OF MICROBIOLOGY. VOL. 62. ISSUE . P. 35-51 | 60 | 76% | 429 |
| 2 | JIN, DJ , CAGLIERO, C , ZHOU, YN , (2012) GROWTH RATE REGULATION IN ESCHERICHIA COLI.FEMS MICROBIOLOGY REVIEWS. VOL. 36. ISSUE 2. P. 269-287 | 94 | 56% | 34 |
| 3 | DENNIS, PP , EHRENBERG, M , BREMER, H , (2004) CONTROL OF RRNA SYNTHESIS IN ESCHERICHIA COLI: A SYSTEMS BIOLOGY APPROACH.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 68. ISSUE 4. P. 639-+ | 75 | 81% | 86 |
| 4 | HAURYLIUK, V , ATKINSON, GC , MURAKAMI, KS , TENSON, T , GERDES, K , (2015) RECENT FUNCTIONAL INSIGHTS INTO THE ROLE OF (P)PPGPP IN BACTERIAL PHYSIOLOGY.NATURE REVIEWS MICROBIOLOGY. VOL. 13. ISSUE 5. P. 298 -309 | 56 | 52% | 38 |
| 5 | GACA, AO , COLOMER-WINTER, C , LEMOS, JA , (2015) MANY MEANS TO A COMMON END: THE INTRICACIES OF (P)PPGPP METABOLISM AND ITS CONTROL OF BACTERIAL HOMEOSTASIS.JOURNAL OF BACTERIOLOGY. VOL. 197. ISSUE 7. P. 1146 -1156 | 61 | 58% | 15 |
| 6 | PAUL, BJ , ROSS, W , GAAL, T , GOURSE, RL , (2004) RRNA TRANSCRIPTION IN ESCHERICHIA COLI.ANNUAL REVIEW OF GENETICS. VOL. 38. ISSUE . P. 749-770 | 68 | 65% | 163 |
| 7 | ZHANG, X , DENNIS, P , EHRENBERG, M , BREMER, H , (2002) KINETIC PROPERTIES OF RRN PROMOTERS IN ESCHERICHIA COLI.BIOCHIMIE. VOL. 84. ISSUE 10. P. 981-996 | 61 | 84% | 26 |
| 8 | LIU, KQ , BITTNER, AN , WANG, JD , (2015) DIVERSITY IN (P)PPGPP METABOLISM AND EFFECTORS.CURRENT OPINION IN MICROBIOLOGY. VOL. 24. ISSUE . P. 72 -79 | 44 | 64% | 17 |
| 9 | GACA, AO , KUDRIN, P , COLOMER-WINTER, C , BELJANTSEVA, J , LIU, KQ , ANDERSON, B , WANG, JD , REJMAN, D , POTRYKUS, K , CASHEL, M , ET AL (2015) FROM (P)PPGPP TO (PP)PGPP: CHARACTERIZATION OF REGULATORY EFFECTS OF PGPP SYNTHESIZED BY THE SMALL ALARMONE SYNTHETASE OF ENTEROCOCCUS FAECALIS.JOURNAL OF BACTERIOLOGY. VOL. 197. ISSUE 18. P. 2908 -2919 | 41 | 80% | 4 |
| 10 | ROSS, W , SANCHEZ-VAZQUEZ, P , CHEN, AY , LEE, JH , BURGOS, HL , GOURSE, RL , (2016) PPGPP BINDING TO A SITE AT THE RNAP-DKSA INTERFACE ACCOUNTS FOR ITS DRAMATIC EFFECTS ON TRANSCRIPTION INITIATION DURING THE STRINGENT RESPONSE.MOLECULAR CELL. VOL. 62. ISSUE 6. P. 811 -823 | 27 | 79% | 6 |
Classes with closest relation at Level 1 |
| Rank | Class id | link |
|---|---|---|
| 1 | 23884 | RIBOSOMAL PROTEIN L1//RPMG//L1 CONFORMATIONS |
| 2 | 5558 | RNA POLYMERASE//ESCHERICHIA COLI RNA POLYMERASE//SIGMA70 |
| 3 | 13486 | RPOS//CURLI//UVI31 |
| 4 | 24380 | BACTERIOPHAGE LAMBDA DEVELOPMENT//LAMBDA PLASMIDS//COLIPHAGE LAMBDA |
| 5 | 37492 | UNIVERSAL STRESS PROTEIN//MJ0577//1JMV |
| 6 | 30472 | RRN LOCUS//16S 23S INTERSPACE//16S ITS 23S |
| 7 | 21689 | OBG//RBFA//DRG2 |
| 8 | 3302 | RNA POLYMERASE//TRANSCRIPTION TERMINATION//NUSG |
| 9 | 8709 | H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN |
| 10 | 8862 | ORIC//DNAA//DNAA PROTEIN |