Class information for:
Level 1: SINE//LINE 1//BIOL COMPUTAT VISUALIZAT

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
1636 2560 48.2 84%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
1227 2             TRANSPOSABLE ELEMENTS//RETROTRANSPOSON//CHROMOSOMA 9098
1636 1                   SINE//LINE 1//BIOL COMPUTAT VISUALIZAT 2560

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SINE authKW 555906 4% 48% 98
2 LINE 1 authKW 507472 4% 38% 113
3 BIOL COMPUTAT VISUALIZAT address 472571 2% 64% 62
4 RETROTRANSPOSON authKW 421541 7% 21% 168
5 RETROTRANSPOSITION authKW 376331 3% 42% 76
6 NON LTR RETROTRANSPOSON authKW 319237 2% 51% 52
7 ALU authKW 315601 3% 32% 82
8 SINES authKW 301839 2% 56% 45
9 RETROPOSON authKW 254353 2% 38% 56
10 TRANSPOSABLE ELEMENTS authKW 188398 6% 11% 147

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Genetics & Heredity 36841 50% 0% 1270
2 Biochemistry & Molecular Biology 11424 55% 0% 1411
3 Evolutionary Biology 6203 11% 0% 271
4 Cell Biology 1800 15% 0% 389
5 Biotechnology & Applied Microbiology 1737 12% 0% 314
6 Biology 426 4% 0% 111
7 Biophysics 102 3% 0% 88
8 Mathematical & Computational Biology 83 1% 0% 35
9 Developmental Biology 52 1% 0% 33
10 Anthropology 24 1% 0% 18

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOL COMPUTAT VISUALIZAT 472571 2% 64% 62
2 EUKARYOT GENOME EVOLUT 120253 0% 92% 11
3 TULANE CANC 61260 2% 12% 42
4 SECT PR2 RETROELEMENTS 59630 0% 100% 5
5 TULANE CANC SL 66 59630 0% 100% 5
6 EXPT PATHOL ZMBE 40070 0% 31% 11
7 COMPUTAT BIOL BIOINFORMAT UNIT 35778 0% 100% 3
8 STANLEY S SCOTT CANC BIOMETRY GENET 35778 0% 100% 3
9 TULANE CANC SL66 35778 0% 100% 3
10 UMR6547 29810 0% 50% 5

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOBILE DNA 172122 2% 31% 47
2 MOLECULAR BIOLOGY AND EVOLUTION 23464 4% 2% 105
3 JOURNAL OF MOLECULAR EVOLUTION 19433 3% 2% 79
4 NUCLEIC ACIDS RESEARCH 15904 9% 1% 231
5 GENE 14446 6% 1% 154
6 BIOTECHFORUM ( BTF ) 10548 2% 2% 48
7 GENOME BIOLOGY AND EVOLUTION 5930 1% 2% 26
8 MOLECULAR BIOLOGY 5306 2% 1% 46
9 CYTOGENETIC AND GENOME RESEARCH 3671 1% 1% 26
10 GENOME RESEARCH 3433 1% 1% 20

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SINE 555906 4% 48% 98 Search SINE Search SINE
2 LINE 1 507472 4% 38% 113 Search LINE+1 Search LINE+1
3 RETROTRANSPOSON 421541 7% 21% 168 Search RETROTRANSPOSON Search RETROTRANSPOSON
4 RETROTRANSPOSITION 376331 3% 42% 76 Search RETROTRANSPOSITION Search RETROTRANSPOSITION
5 NON LTR RETROTRANSPOSON 319237 2% 51% 52 Search NON+LTR+RETROTRANSPOSON Search NON+LTR+RETROTRANSPOSON
6 ALU 315601 3% 32% 82 Search ALU Search ALU
7 SINES 301839 2% 56% 45 Search SINES Search SINES
8 RETROPOSON 254353 2% 38% 56 Search RETROPOSON Search RETROPOSON
9 TRANSPOSABLE ELEMENTS 188398 6% 11% 147 Search TRANSPOSABLE+ELEMENTS Search TRANSPOSABLE+ELEMENTS
10 SVA 155263 1% 52% 25 Search SVA Search SVA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 KAZAZIAN, HH , HANCKS, DC , (2016) ROLES FOR RETROTRANSPOSON INSERTIONS IN HUMAN DISEASE.MOBILE DNA. VOL. 7. ISSUE . P. - 196 67% 7
2 CORDAUX, R , BATZER, MA , (2009) THE IMPACT OF RETROTRANSPOSONS ON HUMAN GENOME EVOLUTION.NATURE REVIEWS GENETICS. VOL. 10. ISSUE 10. P. 691 -703 131 84% 503
3 BECK, CR , GARCIA-PEREZ, JL , BADGE, RM , MORAN, JV , (2011) LINE-1 ELEMENTS IN STRUCTURAL VARIATION AND DISEASE.ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 12. VOL. 12. ISSUE . P. 187 -215 172 68% 121
4 KRAMEROV, DA , VASSETZKY, NS , (2005) SHORT RETROPOSONS IN EUKARYOTIC GENOMES.INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL 247. VOL. 247. ISSUE . P. 165 -+ 193 69% 132
5 BELANCIO, VP , HEDGES, DJ , DEININGER, P , (2008) MAMMALIAN NON-LTR RETROTRANSPOSONS: FOR BETTER OR WORSE, IN SICKNESS AND IN HEALTH.GENOME RESEARCH. VOL. 18. ISSUE 3. P. 343 -358 140 73% 141
6 HANCKS, DC , KAZAZIAN, HH , (2012) ACTIVE HUMAN RETROTRANSPOSONS: VARIATION AND DISEASE.CURRENT OPINION IN GENETICS & DEVELOPMENT. VOL. 22. ISSUE 3. P. 191-203 92 77% 171
7 GOODIER, JL , (2016) RESTRICTING RETROTRANSPOSONS: A REVIEW.MOBILE DNA. VOL. 7. ISSUE . P. - 215 44% 1
8 BABUSHOK, DV , KAZAZIAN, HH , (2007) PROGRESS IN UNDERSTANDING THE BIOLOGY OF THE HUMAN MUTAGEN LINE-1.HUMAN MUTATION. VOL. 28. ISSUE 6. P. 527 -539 114 78% 104
9 KONKEL, MK , WALKER, JA , BATZER, MA , (2010) LINES AND SINES OF PRIMATE EVOLUTION.EVOLUTIONARY ANTHROPOLOGY. VOL. 19. ISSUE 6. P. 236 -249 113 85% 11
10 HEDGES, DJ , BELANCIO, VP , (2011) RESTLESS GENOMES: HUMANS AS A MODEL ORGANISM FOR UNDERSTANDING HOST-RETROTRANSPOSABLE ELEMENT DYNAMICS.ADVANCES IN GENETICS, VOL 73. VOL. 73. ISSUE . P. 219-262 130 70% 9

Classes with closest relation at Level 1


Rank Class id link
1 28425 PROCESSED PSEUDOGENES//CYP4Z2P//DUPLICATED PSEUDOGENES
2 22078 ICF SYNDROME//EXCELLENCE MOL GENET CANC HUMAN DIS//COBRALINE 1
3 6470 RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS
4 22092 POKEY//28S SEQUENCES//2ISP
5 21858 VL30//INTRACISTERNAL A PARTICLE//INTRACISTERNAL A TYPE PARTICLES
6 4837 HUMAN ENDOGENOUS RETROVIRUS//ENDOGENOUS RETROVIRUS//SYNCYTIN
7 2782 P ELEMENT//HYBRID DYSGENESIS//TRANSPOSABLE ELEMENTS
8 17572 TY1//SECT EUKARYOT TRANSPOSABLE ELEMENTS//TY ELEMENTS
9 13045 ISOCHORES//EVOLUZ MOL//MALE MUTATION BIAS
10 19282 CONSERVED NON CODING ELEMENTS//IROQUOIS//ENERGY ENVIRONM BIOL COMP

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