Class information for:
Level 1: TY1//SECT EUKARYOT TRANSPOSABLE ELEMENTS//TY ELEMENTS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
17572 592 43.6 77%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
225 2             YEAST//SACCHAROMYCES CEREVISIAE//SCHIZOSACCHAROMYCES POMBE 20517
17572 1                   TY1//SECT EUKARYOT TRANSPOSABLE ELEMENTS//TY ELEMENTS 592

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TY1 authKW 573306 3% 65% 17
2 SECT EUKARYOT TRANSPOSABLE ELEMENTS address 528155 3% 64% 16
3 TY ELEMENTS authKW 445783 2% 79% 11
4 TY RETROTRANSPOSON authKW 206315 1% 100% 4
5 TY1 RETROTRANSPOSITION authKW 206315 1% 100% 4
6 TY1 ELEMENT authKW 165051 1% 80% 4
7 TY5 authKW 154736 1% 100% 3
8 TY3 authKW 117891 1% 57% 4
9 CODON INSERTION MUTATIONS authKW 103158 0% 100% 2
10 MOL GENETWADSWORTH address 103158 0% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Genetics & Heredity 3399 32% 0% 189
2 Biochemistry & Molecular Biology 3027 59% 0% 347
3 Cell Biology 2232 32% 0% 190
4 Mycology 654 4% 0% 26
5 Virology 575 8% 0% 47
6 Biotechnology & Applied Microbiology 277 10% 0% 62
7 Microbiology 154 8% 0% 48
8 Biology 92 4% 0% 25
9 Developmental Biology 14 1% 0% 8
10 Toxicology 3 2% 0% 9

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SECT EUKARYOT TRANSPOSABLE ELEMENTS 528155 3% 64% 16
2 MOL GENETWADSWORTH 103158 0% 100% 2
3 GENE REGULAT CHROMOSOME BIOL 66219 3% 8% 17
4 RETROVIRUS MOL BIOL GRP 58022 1% 38% 3
5 ABL BASIC PROGRAMMOVABLE GENET ELEMENTS SECT 51579 0% 100% 1
6 BDEPARTMENT MOL CELLULAR BIOL 51579 0% 100% 1
7 BROADWAY BLDG 51579 0% 100% 1
8 CRYOBIOL LYOPHILIZAT 51579 0% 100% 1
9 CURIE BIOL URA 1342 CNRS 51579 0% 100% 1
10 ENET CELL BIOL DEV 51579 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR AND CELLULAR BIOLOGY 17568 15% 0% 87
2 GENETICS 11755 9% 0% 54
3 MOBILE DNA 8418 1% 3% 5
4 YEAST 6542 3% 1% 19
5 CURRENT GENETICS 4030 3% 0% 17
6 INTERNATIONAL JOURNAL OF GENOME RESEARCH 3437 0% 7% 1
7 NUCLEIC ACIDS RESEARCH 2715 8% 0% 46
8 JOURNAL OF VIROLOGY 1641 6% 0% 36
9 MOLECULAR & GENERAL GENETICS 1346 1% 0% 8
10 GENOME RESEARCH 1339 1% 0% 6

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TY1 573306 3% 65% 17 Search TY1 Search TY1
2 TY ELEMENTS 445783 2% 79% 11 Search TY+ELEMENTS Search TY+ELEMENTS
3 TY RETROTRANSPOSON 206315 1% 100% 4 Search TY+RETROTRANSPOSON Search TY+RETROTRANSPOSON
4 TY1 RETROTRANSPOSITION 206315 1% 100% 4 Search TY1+RETROTRANSPOSITION Search TY1+RETROTRANSPOSITION
5 TY1 ELEMENT 165051 1% 80% 4 Search TY1+ELEMENT Search TY1+ELEMENT
6 TY5 154736 1% 100% 3 Search TY5 Search TY5
7 TY3 117891 1% 57% 4 Search TY3 Search TY3
8 CODON INSERTION MUTATIONS 103158 0% 100% 2 Search CODON+INSERTION+MUTATIONS Search CODON+INSERTION+MUTATIONS
9 TY3 RETROTRANSPOSON 103158 0% 100% 2 Search TY3+RETROTRANSPOSON Search TY3+RETROTRANSPOSON
10 RETROTRANSPOSON 93261 6% 5% 38 Search RETROTRANSPOSON Search RETROTRANSPOSON

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 PACHULSKA-WIECZOREK, K , LE GRICE, SFJ , PURZYCKA, KJ , (2016) DETERMINANTS OF GENOMIC RNA ENCAPSIDATION IN THE SACCHAROMYCES CEREVISIAE LONG TERMINAL REPEAT RETROTRANSPOSONS TY1 AND TY3.VIRUSES-BASEL. VOL. 8. ISSUE 7. P. - 74 58% 0
2 LESAGE, P , TODESCHINI, AL , (2005) HAPPY TOGETHER: THE LIFE AND TIMES OF TY RETROTRANSPOSONS AND THEIR HOSTS.CYTOGENETIC AND GENOME RESEARCH. VOL. 110. ISSUE 1-4. P. 70-90 86 53% 69
3 GARFINKEL, DJ , NYSWANER, KM , STEFANISKO, KM , CHANG, C , MOORE, SP , (2005) TY1 COPY NUMBER DYNAMICS IN SACCHAROMYCES.GENETICS. VOL. 169. ISSUE 4. P. 1845 -1857 48 79% 10
4 SAHA, A , MITCHELL, JA , NISHIDA, Y , HILDRETH, JE , ARIBERRE, JA , GILBERT, WV , GARFINKEL, DJ , (2015) A TRANS-DOMINANT FORM OF GAG RESTRICTS TY1 RETROTRANSPOSITION AND MEDIATES COPY NUMBER CONTROL.JOURNAL OF VIROLOGY. VOL. 89. ISSUE 7. P. 3922 -3938 47 51% 4
5 ROTH, JF , (2000) THE YEAST TY VIRUS-LIKE PARTICLES.YEAST. VOL. 16. ISSUE 9. P. 785-795 48 73% 32
6 TUCKER, JM , LARANGO, ME , WACHSMUTH, LP , KANNAN, N , GARFINKEL, DJ , (2015) THE TY1 RETROTRANSPOSON RESTRICTION FACTOR P22 TARGETS GAG.PLOS GENETICS. VOL. 11. ISSUE 10. P. - 45 52% 2
7 GARFINKEL, DJ , TUCKER, JM , SAHA, A , NISHIDA, Y , PACHULSKA-WIECZOREK, K , BLASZCZYK, L , PURZYCKA, KJ , (2016) A SELF-ENCODED CAPSID DERIVATIVE RESTRICTS TY1 RETROTRANSPOSITION IN SACCHAROMYCES.CURRENT GENETICS. VOL. 62. ISSUE 2. P. 321 -329 37 49% 2
8 ROTH, JF , KINGSMAN, SM , KINGSMAN, AJ , MARTIN-RENDON, E , (2000) POSSIBLE REGULATORY FUNCTION OF THE SACCHAROMYCES CEREVISIAE TY1 RETROTRANSPOSON CORE PROTEIN.YEAST. VOL. 16. ISSUE 10. P. 921-932 38 83% 4
9 WILHELM, FX , WILHELM, M , GABRIEL, A , (2005) REVERSE TRANSCRIPTASE AND INTEGRASE OF THE SACCHAROMYCES CEREVISIAE TY1 ELEMENT.CYTOGENETIC AND GENOME RESEARCH. VOL. 110. ISSUE 1-4. P. 269-287 58 43% 11
10 GARFINKEL, DJ , NYSWANER, K , WANG, J , CHO, JY , (2003) POST-TRANSCRIPTIONAL COSUPPRESSION OF TY1 RETROTRANSPOSITION.GENETICS. VOL. 165. ISSUE 1. P. 83 -99 38 67% 31

Classes with closest relation at Level 1


Rank Class id link
1 16690 YEAST//CHROMOSOME XIV//CHROMOSOME XV
2 6470 RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS
3 2782 P ELEMENT//HYBRID DYSGENESIS//TRANSPOSABLE ELEMENTS
4 13617 2 MU M PLASMID//2 MU M CIRCLE//YEP VECTOR
5 12501 SIR COMPLEX//SIR PROTEINS//SIR3
6 5781 RNA POLYMERASE III//TFIIIB//RNA POLYMERASE III TRANSCRIPTION
7 2499 INTEGRASE//HIV 1 INTEGRASE//LEDGF P75
8 4671 RAD51//RAD52//HOMOLOGOUS RECOMBINATION
9 7981 SACCHAROMYCES SENSU STRICTO//GENET GENOM MICROBIOL//WINE YEAST
10 5490 NCP7//RNA DIMERIZATION//NUCLEOCAPSID PROTEIN

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