Class information for:
Level 1: REV//RRE//REV PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12194 925 49.5 92%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
12194 1                   REV//RRE//REV PROTEIN 925

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 REV authKW 1180570 9% 42% 85
2 RRE authKW 463726 3% 59% 24
3 REV PROTEIN authKW 211259 1% 80% 8
4 HIV 1 REV authKW 163896 1% 41% 12
5 REV RESPONSE ELEMENT authKW 162503 1% 62% 8
6 HUMAN RETROVIRUS PATHOGENESIS GRP address 147038 1% 64% 7
7 ARGININE RICH MOTIF authKW 133125 1% 37% 11
8 REV RESPONSIVE ELEMENT authKW 118830 1% 60% 6
9 RNA EXPORT authKW 109626 2% 20% 17
10 HIV REV authKW 103152 1% 63% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Virology 39223 49% 0% 456
2 Biochemistry & Molecular Biology 1836 39% 0% 357
3 Cell Biology 1383 21% 0% 195
4 Infectious Diseases 157 5% 0% 43
5 Biophysics 118 5% 0% 48
6 Immunology 62 6% 0% 54
7 Genetics & Heredity 33 4% 0% 37
8 Biotechnology & Applied Microbiology 20 4% 0% 33
9 Developmental Biology 19 1% 0% 12
10 Biochemical Research Methods 5 2% 0% 17

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 HUMAN RETROVIRUS PATHOGENESIS GRP 147038 1% 64% 7
2 MYLES H THALER AIDS HUMAN RETROVIRUS 102675 2% 22% 14
3 HUMAN RETROVIRUS SECT 49786 1% 12% 13
4 AG BIODV 33010 0% 100% 1
5 ALB BASIC PROGRAM 33010 0% 100% 1
6 ARNRNPUMR 7214 33010 0% 100% 1
7 BIOTECHNOL IMMUNODIAGNOSIS 33010 0% 100% 1
8 CNRS UHPUMR 7567 33010 0% 100% 1
9 COCHIN GENET MOLEC CNRS UPR0415 33010 0% 100% 1
10 COCHIN GENET MOLEC INSERM U363 33010 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF VIROLOGY 37221 23% 1% 211
2 RETROVIROLOGY 29522 4% 3% 33
3 VIROLOGY 14354 10% 0% 90
4 AIDS RESEARCH AND HUMAN RETROVIRUSES 2439 2% 0% 20
5 NEW BIOLOGIST 1899 0% 2% 3
6 CURRENT HIV RESEARCH 1437 1% 1% 6
7 RNA-A PUBLICATION OF THE RNA SOCIETY 1259 1% 1% 7
8 MOLECULAR AND CELLULAR BIOLOGY 1204 3% 0% 29
9 RNA 1039 1% 0% 9
10 RNA BIOLOGY 890 1% 1% 5

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 REV 1180570 9% 42% 85 Search REV Search REV
2 RRE 463726 3% 59% 24 Search RRE Search RRE
3 REV PROTEIN 211259 1% 80% 8 Search REV+PROTEIN Search REV+PROTEIN
4 HIV 1 REV 163896 1% 41% 12 Search HIV+1+REV Search HIV+1+REV
5 REV RESPONSE ELEMENT 162503 1% 62% 8 Search REV+RESPONSE+ELEMENT Search REV+RESPONSE+ELEMENT
6 ARGININE RICH MOTIF 133125 1% 37% 11 Search ARGININE+RICH+MOTIF Search ARGININE+RICH+MOTIF
7 REV RESPONSIVE ELEMENT 118830 1% 60% 6 Search REV+RESPONSIVE+ELEMENT Search REV+RESPONSIVE+ELEMENT
8 RNA EXPORT 109626 2% 20% 17 Search RNA+EXPORT Search RNA+EXPORT
9 HIV REV 103152 1% 63% 5 Search HIV+REV Search HIV+REV
10 BACTERIAL REPORTER SYSTEM 66019 0% 100% 2 Search BACTERIAL+REPORTER+SYSTEM Search BACTERIAL+REPORTER+SYSTEM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 VERCRUYSSE, T , DAELEMANS, D , (2013) HIV-1 REV MULTIMERIZATION: MECHANISM AND INSIGHTS.CURRENT HIV RESEARCH. VOL. 11. ISSUE 8. P. 623-634 111 75% 7
2 POLLARD, VW , MALIM, MH , (1998) THE HIV-1 REV PROTEIN.ANNUAL REVIEW OF MICROBIOLOGY. VOL. 52. ISSUE . P. 491-532 127 56% 458
3 SHERPA, C , RAUSCH, JW , LE GRICE, SFJ , HAMMARSKJOLD, ML , REKOSH, D , (2015) THE HIV-1 REV RESPONSE ELEMENT (RRE) ADOPTS ALTERNATIVE CONFORMATIONS THAT PROMOTE DIFFERENT RATES OF VIRUS REPLICATION.NUCLEIC ACIDS RESEARCH. VOL. 43. ISSUE 9. P. 4676 -4686 58 81% 10
4 HAUBER, J , (2001) NUCLEAR EXPORT MEDIATED BY THE REV/REX CLASS OF RETROVIRAL TRANS-ACTIVATOR PROTEINS.NUCLEAR EXPORT OF VIRAL RNAS. VOL. 259. ISSUE . P. 55 -76 109 71% 5
5 RAUSCH, JW , LE GRICE, SFJ , (2015) HIV REV ASSEMBLY ON THE REV RESPONSE ELEMENT (RRE): A STRUCTURAL PERSPECTIVE.VIRUSES-BASEL. VOL. 7. ISSUE 6. P. 3053 -3075 60 75% 11
6 GROOM, HCT , ANDERSON, EC , LEVER, AM , (2009) REV: BEYOND NUCLEAR EXPORT.JOURNAL OF GENERAL VIROLOGY. VOL. 90. ISSUE . P. 1303-1318 105 52% 41
7 HOFFMANN, D , SCHWARCK, D , BANNING, C , BRENNER, M , MARIYANNA, L , KREPSTAKIES, M , SCHINDLER, M , MILLAR, DP , HAUBER, J , (2012) FORMATION OF TRANS-ACTIVATION COMPETENT HIV-1 REV:RRE COMPLEXES REQUIRES THE RECRUITMENT OF MULTIPLE PROTEIN ACTIVATION DOMAINS.PLOS ONE. VOL. 7. ISSUE 6. P. - 71 76% 11
8 FERNANDES, JD , BOOTH, DS , FRANKEL, AD , (2016) A STRUCTURALLY PLASTIC RIBONUCLEOPROTEIN COMPLEX MEDIATES POST-TRANSCRIPTIONAL GENE REGULATION IN HIV-1.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 7. ISSUE 4. P. 470 -486 68 60% 1
9 THOMAS, SL , OFT, M , JAKSCHE, H , CASARI, G , HEGER, P , DOBROVNIK, M , BEVEC, D , HAUBER, J , (1998) FUNCTIONAL ANALYSIS OF THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REV PROTEIN OLIGOMERIZATION INTERFACE.JOURNAL OF VIROLOGY. VOL. 72. ISSUE 4. P. 2935 -2944 83 75% 44
10 HAMMARSKJOLD, ML , REKOSH, D , (2011) A LONG-AWAITED STRUCTURE IS REV-EALED.VIRUSES-BASEL. VOL. 3. ISSUE 5. P. 484-492 50 83% 6

Classes with closest relation at Level 1


Rank Class id link
1 4242 TAT//TAT PROTEIN//HIV 1 TAT
2 16463 MRNA EXPORT//NXF1//THO COMPLEX
3 25640 SELINEXOR//XPO1//CRM1 INHIBITOR
4 6065 TAX//HTLV 1//HBZ
5 16646 BOVINE IMMUNODEFICIENCY VIRUS//EIAV//EQUINE INFECTIOUS ANEMIA
6 785 SR PROTEINS//ALTERNATIVE SPLICING//POLYPYRIMIDINE TRACT BINDING PROTEIN
7 18997 HYPUSINE//EIF5A//DEOXYHYPUSINE SYNTHASE
8 5490 NCP7//RNA DIMERIZATION//NUCLEOCAPSID PROTEIN
9 18528 SAM68//BRK//PTK6
10 884 NUCLEAR PORE COMPLEX//NUCLEOPORIN//NUCLEAR TRANSPORT

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