Class information for:
Level 1: NCP7//RNA DIMERIZATION//NUCLEOCAPSID PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5490 1617 50.0 83%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
29 3       HIV//VIROLOGY//HIV 1 108954
2356 2             NNRTIS//REVERSE TRANSCRIPTASE//HIV DRUG ISTANCE PROGRAM 4364
5490 1                   NCP7//RNA DIMERIZATION//NUCLEOCAPSID PROTEIN 1617

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NCP7 authKW 356731 1% 82% 23
2 RNA DIMERIZATION authKW 346956 1% 88% 21
3 NUCLEOCAPSID PROTEIN authKW 344353 5% 24% 77
4 MCGILL AIDS address 238966 3% 26% 48
5 REVERSE TRANSCRIPTION authKW 210194 5% 14% 81
6 HIV 1 NUCLEOCAPSID PROTEIN authKW 207705 1% 100% 11
7 AIDS VACCINE PROGRAM address 183860 3% 19% 51
8 NUCLEIC ACID CHAPERONE authKW 181884 1% 57% 17
9 ORETRO address 157542 1% 38% 22
10 HIV DRUG ISTANCE PROGRAM address 150158 4% 12% 68

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Virology 57063 45% 0% 728
2 Biochemistry & Molecular Biology 5230 48% 0% 772
3 Biophysics 277 6% 0% 94
4 Infectious Diseases 71 3% 0% 45
5 Chemistry, Medicinal 31 2% 0% 34
6 Cell Biology 31 4% 0% 72
7 Biology 13 2% 0% 25
8 Biotechnology & Applied Microbiology 11 3% 0% 44
9 Immunology 9 3% 0% 51
10 Microbiology 4 2% 0% 36

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MCGILL AIDS 238966 3% 26% 48
2 AIDS VACCINE PROGRAM 183860 3% 19% 51
3 ORETRO 157542 1% 38% 22
4 HIV DRUG ISTANCE PROGRAM 150158 4% 12% 68
5 INSERM 758 97107 0% 86% 6
6 PHARMACOCHIM MOL STRUCT 90047 2% 19% 25
7 INSERM 412 84107 0% 64% 7
8 PROGRAM STRUCT BIOL BIOCHEM BIOPHYS 67434 0% 71% 5
9 U266 67184 1% 32% 11
10 UNITE VIROL HUMAINE 62696 1% 20% 17

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF VIROLOGY 78523 25% 1% 405
2 RETROVIROLOGY 16860 2% 3% 33
3 JOURNAL OF MOLECULAR BIOLOGY 10423 7% 0% 114
4 VIROLOGY 8135 6% 0% 90
5 NUCLEIC ACIDS RESEARCH 7578 8% 0% 127
6 RNA 3567 1% 1% 22
7 VIRUSES-BASEL 2927 1% 1% 16
8 VIRUS RESEARCH 2567 2% 1% 27
9 BIOCHEMISTRY 2504 5% 0% 86
10 RNA BIOLOGY 2470 1% 1% 11

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 NCP7 356731 1% 82% 23 Search NCP7 Search NCP7
2 RNA DIMERIZATION 346956 1% 88% 21 Search RNA+DIMERIZATION Search RNA+DIMERIZATION
3 NUCLEOCAPSID PROTEIN 344353 5% 24% 77 Search NUCLEOCAPSID+PROTEIN Search NUCLEOCAPSID+PROTEIN
4 REVERSE TRANSCRIPTION 210194 5% 14% 81 Search REVERSE+TRANSCRIPTION Search REVERSE+TRANSCRIPTION
5 HIV 1 NUCLEOCAPSID PROTEIN 207705 1% 100% 11 Search HIV+1+NUCLEOCAPSID+PROTEIN Search HIV+1+NUCLEOCAPSID+PROTEIN
6 NUCLEIC ACID CHAPERONE 181884 1% 57% 17 Search NUCLEIC+ACID+CHAPERONE Search NUCLEIC+ACID+CHAPERONE
7 PRIMER BINDING SITE 141602 1% 50% 15 Search PRIMER+BINDING+SITE Search PRIMER+BINDING+SITE
8 RNA PACKAGING 121698 1% 34% 19 Search RNA+PACKAGING Search RNA+PACKAGING
9 NUCLEIC ACID CHAPERONE ACTIVITY 113293 0% 100% 6 Search NUCLEIC+ACID+CHAPERONE+ACTIVITY Search NUCLEIC+ACID+CHAPERONE+ACTIVITY
10 TRNA3LYS 102800 0% 78% 7 Search TRNA3LYS Search TRNA3LYS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 LU, K , HENG, X , SUMMERS, MF , (2011) STRUCTURAL DETERMINANTS AND MECHANISM OF HIV-1 GENOME PACKAGING.JOURNAL OF MOLECULAR BIOLOGY. VOL. 410. ISSUE 4. P. 609-633 185 73% 89
2 LEVIN, JG , GUO, JH , ROUZINA, I , MUSIER-FORSYTH, K , (2005) NUCLEIC ACID CHAPERONE ACTIVITY OF HIV-1 NUCLEOCAPSID PROTEIN: CRITICAL ROLE IN REVERSE TRANSCRIPTION AND MOLECULAR MECHANISM.PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 80. VOL. 80. ISSUE . P. 217 -286 226 61% 228
3 DARLIX, JL , DE ROCQUIGNY, H , MAUFFRET, O , MELY, Y , (2014) RETROSPECTIVE ON THE ALL-IN-ONE RETROVIRAL NUCLEOCAPSID PROTEIN.VIRUS RESEARCH. VOL. 193. ISSUE . P. 2 -15 174 67% 6
4 MORI, M , KOVALENKO, L , LYONNAIS, S , ANTAKI, D , TORBETT, BE , BOTTA, M , MIRAMBEAU, G , MELY, Y , (2015) NUCLEOCAPSID PROTEIN: A DESIRABLE TARGET FOR FUTURE THERAPIES AGAINST HIV-1.FUTURE OF HIV-1 THERAPEUTICS: RESISTANCE IS FUTILE?. VOL. 389. ISSUE . P. 53 -92 133 78% 8
5 D'SOUZA, V , SUMMERS, MF , (2005) HOW RETROVIRUSES SELECT THEIR GENOMES.NATURE REVIEWS MICROBIOLOGY. VOL. 3. ISSUE 8. P. 643-655 133 86% 180
6 ALI, LM , RIZVI, TA , MUSTAFA, F , (2016) CROSS- AND CO-PACKAGING OF RETROVIRAL RNAS AND THEIR CONSEQUENCES.VIRUSES-BASEL. VOL. 8. ISSUE 10. P. - 149 71% 0
7 BERKOWITZ, R , FISHER, J , GOFF, SP , (1996) RNA PACKAGING.MORPHOGENESIS AND MATURATION OF RETROVIRUSES. VOL. 214. ISSUE . P. 177-218 143 85% 280
8 LEVIN, JG , MITRA, M , MASCARENHAS, A , MUSIER-FORSYTH, K , (2010) ROLE OF HIV-1 NUCLEOCAPSID PROTEIN IN HIV-1 REVERSE TRANSCRIPTION.RNA BIOLOGY. VOL. 7. ISSUE 6. P. 754 -774 149 63% 49
9 PAILLART, JC , SHEHU-XHILAGA, M , MARQUET, R , MAK, J , (2004) DIMERIZATION OF RETROVIRAL RNA GENOMES: AN INSEPARABLE PAIR.NATURE REVIEWS MICROBIOLOGY. VOL. 2. ISSUE 6. P. 461-472 110 76% 178
10 SLEIMAN, D , GOLDSCHMIDT, V , BARRAUD, P , MARQUET, R , PAILLART, JC , TISNE, C , (2012) INITIATION OF HIV-1 REVERSE TRANSCRIPTION AND FUNCTIONAL ROLE OF NUCLEOCAPSID-MEDIATED TRNA/VIRAL GENOME INTERACTIONS.VIRUS RESEARCH. VOL. 169. ISSUE 2. P. 324-339 106 75% 12

Classes with closest relation at Level 1


Rank Class id link
1 3841 VIRUS CELL INTERACT SECT//GAG//HIV DRUG ISTANCE PROGRAM
2 1509 NNRTIS//REVERSE TRANSCRIPTASE//HIV 1 REVERSE TRANSCRIPTASE
3 17572 TY1//SECT EUKARYOT TRANSPOSABLE ELEMENTS//TY ELEMENTS
4 12194 REV//RRE//REV PROTEIN
5 7696 RETROVIRAL VECTOR//HUMAN GENE THERAPY//REPLICATION COMPETENT RETROVIRUS
6 9090 VIF//APOBEC3G//APOBEC3
7 35791 PEG10//CNBP//CELLULAR NUCLEIC ACID BINDING PROTEIN
8 14197 ARTIFICIAL TRANSCRIPTION FACTOR//ZINC FINGER//RECOGNITION CODE
9 4242 TAT//TAT PROTEIN//HIV 1 TAT
10 9468 AVIAN LEUKOSIS VIRUS//SUBGROUP J AVIAN LEUKOSIS VIRUS//AVIAN LEUKOSIS VIRUS SUBGROUP J

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