Class information for:
Level 1: BICLUSTERING//GENE EXPRESSION DATA//GENE EXPRESSION DATA ANALYSIS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
7323 1381 32.5 65%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
868 2             BMC BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS 11572
7323 1                   BICLUSTERING//GENE EXPRESSION DATA//GENE EXPRESSION DATA ANALYSIS 1381

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BICLUSTERING authKW 1404463 7% 62% 103
2 GENE EXPRESSION DATA authKW 381283 5% 25% 69
3 GENE EXPRESSION DATA ANALYSIS authKW 182543 1% 49% 17
4 CO CLUSTERING authKW 134401 2% 26% 23
5 BIOINFORMATICS journal 91616 15% 2% 210
6 ORDER PRESERVING SUBMATRIX authKW 88438 0% 100% 4
7 PLAID MODEL authKW 88438 0% 100% 4
8 GENE EXPRESSION DATA CLUSTERING authKW 78959 0% 71% 5
9 MATHEMATICAL & COMPUTATIONAL BIOLOGY WoSSC 70913 41% 1% 573
10 TIME COURSE GENE EXPRESSION authKW 69088 0% 63% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Mathematical & Computational Biology 70913 41% 1% 573
2 Biochemical Research Methods 17185 37% 0% 514
3 Biotechnology & Applied Microbiology 10491 37% 0% 513
4 Computer Science, Artificial Intelligence 4981 16% 0% 222
5 Statistics & Probability 3679 13% 0% 179
6 Computer Science, Interdisciplinary Applications 2795 13% 0% 174
7 Computer Science, Theory & Methods 970 8% 0% 109
8 Computer Science, Information Systems 748 7% 0% 91
9 Medical Informatics 692 3% 0% 40
10 Genetics & Heredity 296 7% 0% 103

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 KIT LANGUAGE TECHNOL DOCTORATE 44219 0% 100% 2
2 NACL TECNOL AGR IB INTA 44219 0% 100% 2
3 GRP GENE COMPUTAT 29478 0% 67% 2
4 MACHINE INTELLIGENCE UNIT 29231 2% 6% 24
5 FICH UNL 28423 0% 43% 3
6 LATICE 27206 0% 31% 4
7 ONCOL PHYSIOL BIOPHYS 24869 0% 38% 3
8 AIDS INFORMAT EDUC PROGRAM 22109 0% 100% 1
9 ARTIFICIAL INTELLIGENCE BIOINFORRNAT GRP 22109 0% 100% 1
10 B IT BONN AACHEN INT INFORMAT TECHNOL 22109 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOINFORMATICS 91616 15% 2% 210
2 BMC BIOINFORMATICS 57690 10% 2% 140
3 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 31228 3% 4% 40
4 INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS 20481 1% 5% 20
5 JOURNAL OF COMPUTATIONAL BIOLOGY 11078 2% 2% 28
6 ALGORITHMS FOR MOLECULAR BIOLOGY 6311 1% 3% 9
7 BIODATA MINING 5145 1% 3% 7
8 STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY 4359 1% 2% 10
9 CURRENT BIOINFORMATICS 3186 1% 2% 8
10 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 2163 0% 2% 6

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 BICLUSTERING 1404463 7% 62% 103 Search BICLUSTERING Search BICLUSTERING
2 GENE EXPRESSION DATA 381283 5% 25% 69 Search GENE+EXPRESSION+DATA Search GENE+EXPRESSION+DATA
3 GENE EXPRESSION DATA ANALYSIS 182543 1% 49% 17 Search GENE+EXPRESSION+DATA+ANALYSIS Search GENE+EXPRESSION+DATA+ANALYSIS
4 CO CLUSTERING 134401 2% 26% 23 Search CO+CLUSTERING Search CO+CLUSTERING
5 ORDER PRESERVING SUBMATRIX 88438 0% 100% 4 Search ORDER+PRESERVING+SUBMATRIX Search ORDER+PRESERVING+SUBMATRIX
6 PLAID MODEL 88438 0% 100% 4 Search PLAID+MODEL Search PLAID+MODEL
7 GENE EXPRESSION DATA CLUSTERING 78959 0% 71% 5 Search GENE+EXPRESSION+DATA+CLUSTERING Search GENE+EXPRESSION+DATA+CLUSTERING
8 TIME COURSE GENE EXPRESSION 69088 0% 63% 5 Search TIME+COURSE+GENE+EXPRESSION Search TIME+COURSE+GENE+EXPRESSION
9 BICLUSTERING ALGORITHM 66328 0% 100% 3 Search BICLUSTERING+ALGORITHM Search BICLUSTERING+ALGORITHM
10 OPSM 66328 0% 100% 3 Search OPSM Search OPSM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 PONTES, B , GIRALDEZ, R , AGUILAR-RUIZ, JS , (2015) BICLUSTERING ON EXPRESSION DATA: A REVIEW.JOURNAL OF BIOMEDICAL INFORMATICS. VOL. 57. ISSUE . P. 163 -180 39 80% 2
2 MUKHOPADHYAY, A , MAULIK, U , BANDYOPADHYAY, S , (2010) ON BICLUSTERING OF GENE EXPRESSION DATA.CURRENT BIOINFORMATICS. VOL. 5. ISSUE 3. P. 204 -216 33 85% 9
3 FLORES, JL , INZA, I , LARRANAGA, P , CALVO, B , (2013) A NEW MEASURE FOR GENE EXPRESSION BICLUSTERING BASED ON NON-PARAMETRIC CORRELATION.COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE. VOL. 112. ISSUE 3. P. 367 -397 33 67% 13
4 AYADI, W , ELLOURNI, M , HAO, JK , (2012) BIMINE+: AN EFFICIENT ALGORITHM FOR DISCOVERING RELEVANT BICLUSTERS OF DNA MICROARRAY DATA.KNOWLEDGE-BASED SYSTEMS. VOL. 35. ISSUE . P. 224 -234 25 86% 4
5 AYADI, W , ELLOUMI, M , HAO, JK , (2012) BICFINDER: A BICLUSTERING ALGORITHM FOR MICROARRAY DATA ANALYSIS.KNOWLEDGE AND INFORMATION SYSTEMS. VOL. 30. ISSUE 2. P. 341 -358 24 89% 6
6 OGHABIAN, A , KILPINEN, S , HAUTANIEMI, S , CZEIZLER, E , (2014) BICLUSTERING METHODS: BIOLOGICAL RELEVANCE AND APPLICATION IN GENE EXPRESSION ANALYSIS.PLOS ONE. VOL. 9. ISSUE 3. P. - 23 77% 15
7 AYADI, W , ELLOUMI, M , HAO, JK , (2009) A BICLUSTERING ALGORITHM BASED ON A BICLUSTER ENUMERATION TREE: APPLICATION TO DNA MICROARRAY DATA.BIODATA MINING. VOL. 2. ISSUE . P. - 22 92% 17
8 NEPOMUCENOA, JA , TRONCOSO, A , AGUILAR-RUIZ, JS , (2015) SCATTER SEARCH-BASED IDENTIFICATION OF LOCAL PATTERNS WITH POSITIVE AND NEGATIVE CORRELATIONS IN GENE EXPRESSION DATA.APPLIED SOFT COMPUTING. VOL. 35. ISSUE . P. 637 -651 23 79% 0
9 COOKE, EJ , SAVAGE, RS , KIRK, PDW , DARKINS, R , WILD, DL , (2011) BAYESIAN HIERARCHICAL CLUSTERING FOR MICROARRAY TIME SERIES DATA WITH REPLICATES AND OUTLIER MEASUREMENTS.BMC BIOINFORMATICS. VOL. 12. ISSUE . P. - 22 79% 14
10 AYADI, W , HAO, JK , (2014) A MEMETIC ALGORITHM FOR DISCOVERING NEGATIVE CORRELATION BICLUSTERS OF DNA MICROARRAY DATA.NEUROCOMPUTING. VOL. 145. ISSUE . P. 14 -22 18 90% 3

Classes with closest relation at Level 1


Rank Class id link
1 6275 GENE REGULATORY NETWORK//NETWORK INFERENCE//REVERSE ENGINEERING
2 1997 FEATURE SELECTION//GENE SELECTION//CANCER CLASSIFICATION
3 22537 MISSING VALUE IMPUTATION//MISSING VALUES//MISSING VALUE ESTIMATION
4 2901 BMC BIOINFORMATICS//MICROARRAY IMAGE//BIOINFORMATICS
5 9574 GENE SET ANALYSIS//GENE ONTOLOGY//BMC BIOINFORMATICS
6 1464 FUZZY CLUSTERING//CLUSTERING//CLUSTER VALIDITY
7 20966 DYNAMICAL NETWORK BIOMARKER//EDGE BIOMARKER//ABORAT INNOVAT MATH MODELLING
8 35798 AFFINITY PROPAGATION//VERY LARGE DATA SETS VLDS//BILINGUAL GRAPH
9 12036 START//MBF//SIC1
10 16697 NONNEGATIVE MATRIX FACTORIZATION//NONNEGATIVE MATRIX FACTORIZATION NMF//CONCEPT FACTORIZATION

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