Class information for:
Level 1: RRP6//MRNP BIOGENESIS METAB//DIS3

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
17891 577 51.5 95%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
17891 1                   RRP6//MRNP BIOGENESIS METAB//DIS3 577

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RRP6 authKW 804933 3% 89% 17
2 MRNP BIOGENESIS METAB address 737010 6% 41% 34
3 DIS3 authKW 695165 3% 77% 17
4 NUCLEAR EXOSOME authKW 423358 1% 100% 8
5 RNA EXOSOME authKW 423350 2% 67% 12
6 RNA SURVEILLANCE authKW 255510 2% 37% 13
7 RNA DEGRADATION authKW 233261 6% 13% 33
8 DIS3L2 authKW 220497 1% 83% 5
9 EXORIBONUCLEASE authKW 175916 3% 21% 16
10 NAB3 authKW 169341 1% 80% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 4688 72% 0% 418
2 Cell Biology 4128 43% 0% 250
3 Genetics & Heredity 589 14% 0% 83
4 Biophysics 172 7% 0% 42
5 Developmental Biology 122 3% 0% 19
6 Biology 48 3% 0% 19
7 Biochemical Research Methods 42 4% 0% 22
8 Mycology 39 1% 0% 7
9 Biotechnology & Applied Microbiology 36 5% 0% 28
10 Medicine, Research & Experimental 6 2% 0% 14

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MRNP BIOGENESIS METAB 737010 6% 41% 34
2 UNITE GENET INTERACT MACROMOL 116777 1% 28% 8
3 PEKING TSINGHUA BIOL SCI 105839 0% 100% 2
4 RNA BIOL GENOME MED 70558 0% 67% 2
5 STRUCT CELL BIOL 67371 3% 8% 16
6 WELLCOME TRUST CELL BIOL 56067 5% 4% 29
7 BEIJING ADV INNOVAT STRUCT BIOL LIFE SCI 52920 0% 100% 1
8 BIOINFORMAT COMPUTAT SYST BIOL SUMMER 52920 0% 100% 1
9 BIOMOL UTRECHT PHARMACEUT SCI 52920 0% 100% 1
10 C T PROGRAM GENE MECHSAKYO KU 52920 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR CELL 14732 7% 1% 39
2 RNA 14083 5% 1% 26
3 WILEY INTERDISCIPLINARY REVIEWS-RNA 7052 1% 2% 7
4 EMBO REPORTS 4776 2% 1% 14
5 RNA-A PUBLICATION OF THE RNA SOCIETY 4144 2% 1% 10
6 NATURE STRUCTURAL & MOLECULAR BIOLOGY 4119 2% 1% 13
7 RNA BIOLOGY 2814 1% 1% 7
8 NUCLEIC ACIDS RESEARCH 2666 8% 0% 45
9 MOLECULAR AND CELLULAR BIOLOGY 2105 5% 0% 30
10 PLOS GENETICS 1955 3% 0% 15

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 RRP6 804933 3% 89% 17 Search RRP6 Search RRP6
2 DIS3 695165 3% 77% 17 Search DIS3 Search DIS3
3 NUCLEAR EXOSOME 423358 1% 100% 8 Search NUCLEAR+EXOSOME Search NUCLEAR+EXOSOME
4 RNA EXOSOME 423350 2% 67% 12 Search RNA+EXOSOME Search RNA+EXOSOME
5 RNA SURVEILLANCE 255510 2% 37% 13 Search RNA+SURVEILLANCE Search RNA+SURVEILLANCE
6 RNA DEGRADATION 233261 6% 13% 33 Search RNA+DEGRADATION Search RNA+DEGRADATION
7 DIS3L2 220497 1% 83% 5 Search DIS3L2 Search DIS3L2
8 EXORIBONUCLEASE 175916 3% 21% 16 Search EXORIBONUCLEASE Search EXORIBONUCLEASE
9 NAB3 169341 1% 80% 4 Search NAB3 Search NAB3
10 TRAMP COMPLEX 169341 1% 80% 4 Search TRAMP+COMPLEX Search TRAMP+COMPLEX

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KILCHERT, C , WITTMANN, S , VASILJEVA, L , (2016) THE REGULATION AND FUNCTIONS OF THE NUCLEAR RNA EXOSOME COMPLEX.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 17. ISSUE 4. P. 227 -239 87 54% 11
2 CHLEBOWSKI, A , LUBAS, M , JENSEN, TH , DZIEMBOWSKI, A , (2013) RNA DECAY MACHINES: THE EXOSOME.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1829. ISSUE 6-7. P. 552 -560 72 74% 68
3 SCHNEIDER, C , TOLLERVEY, D , (2013) THREADING THE BARREL OF THE RNA EXOSOME.TRENDS IN BIOCHEMICAL SCIENCES. VOL. 38. ISSUE 10. P. 485-493 68 85% 36
4 HAN, J , VAN HOOF, A , (2016) THE RNA EXOSOME CHANNELING AND DIRECT ACCESS CONFORMATIONS HAVE DISTINCT IN VIVO FUNCTIONS.CELL REPORTS. VOL. 16. ISSUE 12. P. 3348 -3358 54 81% 1
5 FOX, MJ , MOSLEY, AL , (2016) RRP6: INTEGRATED ROLES IN NUCLEAR RNA METABOLISM AND TRANSCRIPTION TERMINATION.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 7. ISSUE 1. P. 91 -104 57 76% 1
6 SCHMIDT, K , BUTLER, JS , (2013) NUCLEAR RNA SURVEILLANCE: ROLE OF TRAMP IN CONTROLLING EXOSOME SPECIFICITY.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 4. ISSUE 2. P. 217-231 69 61% 28
7 MITCHELL, P , (2014) EXOSOME SUBSTRATE TARGETING: THE LONG AND SHORT OF IT.BIOCHEMICAL SOCIETY TRANSACTIONS. VOL. 42. ISSUE . P. 1129 -1134 52 85% 7
8 JANUSZYK, K , LIMA, CD , (2014) THE EUKARYOTIC RNA EXOSOME.CURRENT OPINION IN STRUCTURAL BIOLOGY. VOL. 24. ISSUE . P. 132-140 45 80% 29
9 KISS, DL , ANDRULIS, ED , (2011) THE EXOZYME MODEL: A CONTINUUM OF FUNCTIONALLY DISTINCT COMPLEXES.RNA. VOL. 17. ISSUE 1. P. 1-13 71 64% 16
10 SCHUCH, B , FEIGENBUTZ, M , MAKINO, DL , FALK, S , BASQUIN, C , MITCHELL, P , CONTI, E , (2014) THE EXOSOME-BINDING FACTORS RRP6 AND RRP47 FORM A COMPOSITE SURFACE FOR RECRUITING THE MTR4 HELICASE.EMBO JOURNAL. VOL. 33. ISSUE 23. P. 2829 -2846 51 78% 11

Classes with closest relation at Level 1


Rank Class id link
1 16463 MRNA EXPORT//NXF1//THO COMPLEX
2 6198 P BODIES//STRESS GRANULES//DECAPPING
3 6760 RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME
4 8466 POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE
5 4461 SNORNA//SMALL NUCLEOLAR RNA//PRE RRNA PROCESSING
6 5889 P TEFB//CDK9//RNA POLYMERASE II
7 10335 NMD//UPF1//NONSENSE MEDIATED MRNA DECAY
8 19084 TRNASE Z//TRNA NUCLEOTIDYLTRANSFERASE//CCA ADDING ENZYME
9 14125 USP22//SET1//UBIQUITIN SPECIFIC PROTEASE 22
10 7297 SCHIZOSACCHAROMYCES POMBE//FISSION YEAST//S POMBE

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