Class information for:
Level 1: P TEFB//CDK9//RNA POLYMERASE II

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5889 1563 54.8 94%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
5889 1                   P TEFB//CDK9//RNA POLYMERASE II 1563

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 P TEFB authKW 1315620 6% 71% 95
2 CDK9 authKW 666619 4% 58% 59
3 RNA POLYMERASE II authKW 578229 10% 19% 158
4 HEXIM1 authKW 440174 2% 87% 26
5 TRANSCRIPTION ELONGATION authKW 431857 4% 34% 66
6 DSIF authKW 253159 1% 72% 18
7 CTD authKW 218200 2% 31% 36
8 CTD PHOSPHATASE authKW 206330 1% 81% 13
9 CYCLIN T1 authKW 205093 1% 50% 21
10 CYCLIN T authKW 157574 1% 73% 11

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Cell Biology 13713 48% 0% 746
2 Biochemistry & Molecular Biology 10424 66% 0% 1034
3 Genetics & Heredity 1863 15% 0% 241
4 Developmental Biology 1276 6% 0% 95
5 Biophysics 374 7% 0% 104
6 Virology 194 3% 0% 50
7 Biology 44 2% 0% 35
8 Biochemical Research Methods 40 3% 0% 42
9 Biotechnology & Applied Microbiology 28 3% 0% 53
10 Mycology 22 1% 0% 10

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ROSALIND RUSSELL MED 139508 1% 36% 20
2 REGULAT EXP S GENET 79761 0% 58% 7
3 UMR 8541 69523 1% 20% 18
4 EXP S ENGN GRP 62501 1% 40% 8
5 EDINBURGH SYST BIOL 58604 0% 100% 3
6 GRP PHYS BIOCHEM 48832 0% 50% 5
7 GENET MOL GEN BIOL 44392 0% 45% 5
8 IFIBYNE UBA CONICET 43952 0% 75% 3
9 ISRAEL PERSONALIZED MED INCPM 39069 0% 100% 2
10 MOL GENET BLOOD DEV 39069 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR CELL 22846 5% 1% 80
2 GENES & DEVELOPMENT 13535 5% 1% 72
3 MOLECULAR AND CELLULAR BIOLOGY 13404 8% 1% 124
4 NATURE STRUCTURAL & MOLECULAR BIOLOGY 8088 2% 1% 30
5 WILEY INTERDISCIPLINARY REVIEWS-RNA 5303 1% 3% 10
6 BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 3629 1% 1% 14
7 RNA 3362 1% 1% 21
8 JOURNAL OF BIOLOGICAL CHEMISTRY 2920 10% 0% 155
9 NUCLEIC ACIDS RESEARCH 2604 5% 0% 74
10 RNA BIOLOGY 2111 1% 1% 10

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 P TEFB 1315620 6% 71% 95 Search P+TEFB Search P+TEFB
2 CDK9 666619 4% 58% 59 Search CDK9 Search CDK9
3 RNA POLYMERASE II 578229 10% 19% 158 Search RNA+POLYMERASE+II Search RNA+POLYMERASE+II
4 HEXIM1 440174 2% 87% 26 Search HEXIM1 Search HEXIM1
5 TRANSCRIPTION ELONGATION 431857 4% 34% 66 Search TRANSCRIPTION+ELONGATION Search TRANSCRIPTION+ELONGATION
6 DSIF 253159 1% 72% 18 Search DSIF Search DSIF
7 CTD 218200 2% 31% 36 Search CTD Search CTD
8 CTD PHOSPHATASE 206330 1% 81% 13 Search CTD+PHOSPHATASE Search CTD+PHOSPHATASE
9 CYCLIN T1 205093 1% 50% 21 Search CYCLIN+T1 Search CYCLIN+T1
10 CYCLIN T 157574 1% 73% 11 Search CYCLIN+T Search CYCLIN+T

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 EICK, D , GEYER, M , (2013) THE RNA POLYMERASE II CARBOXY-TERMINAL DOMAIN (CTD) CODE.CHEMICAL REVIEWS. VOL. 113. ISSUE 11. P. 8456-8490 197 54% 76
2 HSIN, JP , MANLEY, JL , (2012) THE RNA POLYMERASE II CTD COORDINATES TRANSCRIPTION AND RNA PROCESSING.GENES & DEVELOPMENT. VOL. 26. ISSUE 19. P. 2119-2137 145 57% 153
3 JERONIMO, C , BATAILLE, AR , ROBERT, F , (2013) THE WRITERS, READERS, AND FUNCTIONS OF THE RNA POLYMERASE II C-TERMINAL DOMAIN CODE.CHEMICAL REVIEWS. VOL. 113. ISSUE 11. P. 8491-8522 210 48% 22
4 ZHOU, Q , LI, TD , PRICE, DH , (2012) RNA POLYMERASE II ELONGATION CONTROL.ANNUAL REVIEW OF BIOCHEMISTRY, VOL 81. VOL. 81. ISSUE . P. 119-143 109 66% 155
5 CORDEN, JL , (2013) RNA POLYMERASE II C-TERMINAL DOMAIN: TETHERING TRANSCRIPTION TO TRANSCRIPT AND TEMPLATE.CHEMICAL REVIEWS. VOL. 113. ISSUE 11. P. 8423 -8455 221 41% 34
6 BENTLEY, DL , (2014) COUPLING MRNA PROCESSING WITH TRANSCRIPTION IN TIME AND SPACE.NATURE REVIEWS GENETICS. VOL. 15. ISSUE 3. P. 163-175 104 57% 117
7 GUO, JN , PRICE, DH , (2013) RNA POLYMERASE II TRANSCRIPTION ELONGATION CONTROL.CHEMICAL REVIEWS. VOL. 113. ISSUE 11. P. 8583 -8603 188 49% 28
8 JERONIMO, C , COLLIN, P , ROBERT, F , (2016) THE RNA POLYMERASE II CTD: THE INCREASING COMPLEXITY OF A LOW-COMPLEXITY PROTEIN DOMAIN.JOURNAL OF MOLECULAR BIOLOGY. VOL. 428. ISSUE 12. P. 2607 -2622 96 69% 7
9 MCNAMARA, RP , BACON, CW , D'ORSO, I , (2016) TRANSCRIPTION ELONGATION CONTROL BY THE 7SK SNRNP COMPLEX: RELEASING THE PAUSE.CELL CYCLE. VOL. 15. ISSUE 16. P. 2115 -2123 88 87% 1
10 QUARESMA, AJC , BUGAI, A , BARBORIC, M , (2016) CRACKING THE CONTROL OF RNA POLYMERASE II ELONGATION BY 7SK SNRNP AND P-TEFB.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE 16. P. 7527 -7539 94 78% 1

Classes with closest relation at Level 1


Rank Class id link
1 23606 CAK//SPY1//CDK ACTIVATING KINASE
2 36779 CDK11P58//PITSLRE//CDK11
3 14125 USP22//SET1//UBIQUITIN SPECIFIC PROTEASE 22
4 8466 POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE
5 4242 TAT//TAT PROTEIN//HIV 1 TAT
6 13537 MEDIATOR COMPLEX//CDK8//MED12
7 17891 RRP6//MRNP BIOGENESIS METAB//DIS3
8 17211 RPB4//RPB7//INTERSPECIFIC COMPLEMENTATION
9 16463 MRNA EXPORT//NXF1//THO COMPLEX
10 32852 POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR//P54NRB//NONO

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