Class information for:
Level 1: COLICIN//COLICIN E1//PYOCIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
8298 1269 38.8 68%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
673 3       SIDEROPHORE//COLICIN//UREASE 9488
1409 2             SIDEROPHORE//COLICIN//PYOVERDIN 8013
8298 1                   COLICIN//COLICIN E1//PYOCIN 1269

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 COLICIN authKW 1936480 9% 68% 118
2 COLICIN E1 authKW 264670 1% 100% 11
3 PYOCIN authKW 246372 1% 64% 16
4 TOLA authKW 225898 1% 72% 13
5 COLICIN E7 authKW 223948 1% 85% 11
6 COLICIN M authKW 168426 1% 100% 7
7 TOL PROTEINS authKW 144365 0% 100% 6
8 TOLB authKW 144365 0% 100% 6
9 COLICIN A authKW 139986 1% 73% 8
10 INGN SYST MACROMOL address 133630 3% 17% 33

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 12636 42% 0% 530
2 Biochemistry & Molecular Biology 4466 50% 0% 629
3 Biophysics 548 9% 0% 108
4 Genetics & Heredity 378 9% 0% 108
5 Biotechnology & Applied Microbiology 304 8% 0% 101
6 Cell Biology 114 7% 0% 88
7 Biochemical Research Methods 29 3% 0% 33
8 Virology 27 2% 0% 21
9 Evolutionary Biology 21 1% 0% 16
10 Parasitiology 9 1% 0% 11

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INGN SYST MACROMOL 133630 3% 17% 33
2 UPR 9027 109337 2% 23% 20
3 NAGATA SPECIAL 96244 0% 100% 4
4 COLICIN GRP 72183 0% 100% 3
5 INGN DYNAM SYST MEMBRANAI 60147 0% 50% 5
6 BIOL STRUCT MICROBIOL 56702 2% 9% 25
7 BIOMEMBRANE MEMBRANE PROT 48122 0% 100% 2
8 BASIC PROBLEMS BIOL 27826 1% 13% 9
9 1 OOL CHEM MAT SCI 24061 0% 100% 1
10 BIJVOET BIMOL 24061 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 19938 13% 1% 166
2 JOURNAL OF GENERAL MICROBIOLOGY 4937 3% 1% 33
3 MOLECULAR MICROBIOLOGY 4223 4% 0% 46
4 MOLECULAR & GENERAL GENETICS 3933 2% 1% 20
5 PLASMID 3405 1% 1% 17
6 MOLECULAR AND GENERAL GENETICS 3092 2% 1% 25
7 FEMS MICROBIOLOGY LETTERS 2617 3% 0% 42
8 MICROBIOLOGYOPEN 2449 0% 2% 6
9 MICROBIOLOGY-SGM 2035 2% 0% 26
10 FOLIA MICROBIOLOGICA 1867 1% 0% 16

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 COLICIN 1936480 9% 68% 118 Search COLICIN Search COLICIN
2 COLICIN E1 264670 1% 100% 11 Search COLICIN+E1 Search COLICIN+E1
3 PYOCIN 246372 1% 64% 16 Search PYOCIN Search PYOCIN
4 TOLA 225898 1% 72% 13 Search TOLA Search TOLA
5 COLICIN E7 223948 1% 85% 11 Search COLICIN+E7 Search COLICIN+E7
6 COLICIN M 168426 1% 100% 7 Search COLICIN+M Search COLICIN+M
7 TOL PROTEINS 144365 0% 100% 6 Search TOL+PROTEINS Search TOL+PROTEINS
8 TOLB 144365 0% 100% 6 Search TOLB Search TOLB
9 COLICIN A 139986 1% 73% 8 Search COLICIN+A Search COLICIN+A
10 COLICIN TRANSLOCATION 120305 0% 100% 5 Search COLICIN+TRANSLOCATION Search COLICIN+TRANSLOCATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 CASCALES, E , BUCHANAN, SK , DUCHE, D , KLEANTHOUS, C , LLOUBES, R , POSTLE, K , RILEY, M , SLATIN, S , CAVARD, D , (2007) COLICIN BIOLOGY.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 71. ISSUE 1. P. 158 -229 374 65% 335
2 KIM, YC , TARR, AW , PENFOLD, CN , (2014) COLICIN IMPORT INTO E. COLI CELLS: A MODEL SYSTEM FOR INSIGHTS INTO THE IMPORT MECHANISMS OF BACTERIOCINS.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1717 -1731 168 76% 3
3 PAPADAKOS, G , WOJDYLA, JA , KLEANTHOUS, C , (2012) NUCLEASE COLICINS AND THEIR IMMUNITY PROTEINS.QUARTERLY REVIEWS OF BIOPHYSICS. VOL. 45. ISSUE 1. P. 57 -103 113 69% 20
4 JAKES, KS , CRAMER, WA , (2012) BORDER CROSSINGS: COLICINS AND TRANSPORTERS.ANNUAL REVIEW OF GENETICS, VOL 46. VOL. 46. ISSUE . P. 209-231 79 69% 23
5 LAKEY, JH , SLATIN, SL , (2001) PORE-FORMING COLICINS AND THEIR RELATIVES.PORE-FORMING TOXINS. VOL. 257. ISSUE . P. 131 -161 90 74% 67
6 SMARDA, J , SMAJS, D , (1998) COLICINS - EXOCELLULAR LETHAL PROTEINS OF ESCHERICHIA COLI.FOLIA MICROBIOLOGICA. VOL. 43. ISSUE 6. P. 563 -582 75 86% 31
7 LUGO, MR , HO, D , MERRILL, AR , (2016) RESOLVING THE 3D SPATIAL ORIENTATION OF HELIX I IN THE CLOSED STATE OF THE COLICIN E1 CHANNEL DOMAIN BY FRET. INSIGHTS INTO THE INTEGRATION MECHANISM.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 608. ISSUE . P. 52 -73 48 86% 0
8 LAZZARONI, JC , DUBUISSON, JF , VIANNEY, A , (2002) THE TOL PROTEINS OF ESCHERICHIA COLI AND THEIR INVOLVEMENT IN THE TRANSLOCATION OF GROUP A COLICINS.BIOCHIMIE. VOL. 84. ISSUE 5-6. P. 391-397 57 90% 77
9 RIDLEY, H , JOHNSON, CL , LAKEY, JH , (2010) INTERFACIAL INTERACTIONS OF PORE-FORMING COLICINS.PROTEINS: MEMBRANE BINDING AND PORE FORMATION. VOL. 677. ISSUE . P. 81 -90 52 87% 5
10 ZHANG, Y , LI, C , VANKEMMELBEKE, MN , BARDELANG, P , PAOLI, M , PENFOLD, CN , JAMES, R , (2010) THE CRYSTAL STRUCTURE OF THE TOLB BOX OF COLICIN A IN COMPLEX WITH TOLB REVEALS IMPORTANT DIFFERENCES IN THE RECRUITMENT OF THE COMMON TOLB TRANSLOCATION PORTAL USED BY GROUP A COLICINS.MOLECULAR MICROBIOLOGY. VOL. 75. ISSUE 3. P. 623 -636 50 85% 8

Classes with closest relation at Level 1


Rank Class id link
1 8716 PYOVERDIN//PYOVERDINE//SIDEROPHORE
2 20232 MICROCIN//LASSO PEPTIDES//MICROCIN J25
3 21857 T6SS//TYPE VI SECRETION//TYPE VI SECRETION SYSTEM
4 15724 FILAMENTOUS BACTERIOPHAGE//GENE 3 PROTEIN//GENE 5 PROTEIN
5 5827 PORIN//MALTOPORIN//OUTER MEMBRANE PROTEIN
6 28802 LOLB//LOLA//LOL SYSTEM
7 26743 CAMPYLOBACTER CONCISUS//OMPLA//ENZYMOL PROT ENGN
8 22981 ENDO EXONUCLEASE//EXTRACELLULAR NUCLEASE//NUCLEASE
9 2349 SECA//SECB//SECYEG
10 8170 PLASMID//REPLICATION CONTROL//PLASMID R6K

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