Class information for:
Level 1: LOLB//LOLA//LOL SYSTEM

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
28802 199 43.1 84%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
892 2             PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA 11392
28802 1                   LOLB//LOLA//LOL SYSTEM 199

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LOLB authKW 982041 4% 80% 8
2 LOLA authKW 843933 6% 50% 11
3 LOL SYSTEM authKW 767222 3% 100% 5
4 BACTERIAL LIPOPROTEIN authKW 414287 5% 30% 9
5 LOL PROTEINS authKW 306889 1% 100% 2
6 LOLCDE authKW 306889 1% 100% 2
7 BACTERIAL LIPID MODIFICATION authKW 204591 1% 67% 2
8 ANTIMICROBIOL HOST DEF address 153444 1% 100% 1
9 APOLIPOPROTEIN N ACYLTRANSFERASE authKW 153444 1% 100% 1
10 BIOL CELLULAR BIOSCI address 153444 1% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 1644 38% 0% 76
2 Biochemistry & Molecular Biology 876 55% 0% 109
3 Biophysics 126 10% 0% 20
4 Biochemical Research Methods 68 7% 0% 14
5 Immunology 46 9% 0% 18
6 Cell Biology 44 10% 0% 19
7 Biotechnology & Applied Microbiology 23 6% 0% 12
8 Infectious Diseases 17 4% 0% 7
9 Mathematical & Computational Biology 8 2% 0% 3
10 Evolutionary Biology 2 1% 0% 2

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ANTIMICROBIOL HOST DEF 153444 1% 100% 1
2 BIOL CELLULAR BIOSCI 153444 1% 100% 1
3 IMIT INTERFAK MIKROBIOL INFEKT MED 153444 1% 100% 1
4 INFECT DIS FOOD CHAIN QUAL CLUSTER ENDEM DI 153444 1% 100% 1
5 INSERM GRP AVENIR 153444 1% 100% 1
6 INSERMU 567 COCHIN 153444 1% 100% 1
7 INTEGRAT CELLULAR BIOLCEA UPS3609 153444 1% 100% 1
8 INTER ULTY MICROBIOL INFECT MED TUBINGEN 153444 1% 100% 1
9 M2CGRP MICROBIOL 153444 1% 100% 1
10 PF6 153444 1% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 4446 16% 0% 31
2 MOLECULAR MICROBIOLOGY 1849 6% 0% 12
3 JOURNAL OF BIOLOGICAL CHEMISTRY 1294 18% 0% 36
4 MICROBIOLOGY-SGM 1244 4% 0% 8
5 ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL 1035 1% 1% 1
6 BIOMOLECULAR NMR ASSIGNMENTS 875 1% 0% 2
7 FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 772 1% 0% 2
8 FEBS JOURNAL 451 2% 0% 4
9 INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY 432 1% 0% 2
10 PATHOGENS AND DISEASE 346 1% 0% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 LOLB 982041 4% 80% 8 Search LOLB Search LOLB
2 LOLA 843933 6% 50% 11 Search LOLA Search LOLA
3 LOL SYSTEM 767222 3% 100% 5 Search LOL+SYSTEM Search LOL+SYSTEM
4 BACTERIAL LIPOPROTEIN 414287 5% 30% 9 Search BACTERIAL+LIPOPROTEIN Search BACTERIAL+LIPOPROTEIN
5 LOL PROTEINS 306889 1% 100% 2 Search LOL+PROTEINS Search LOL+PROTEINS
6 LOLCDE 306889 1% 100% 2 Search LOLCDE Search LOLCDE
7 BACTERIAL LIPID MODIFICATION 204591 1% 67% 2 Search BACTERIAL+LIPID+MODIFICATION Search BACTERIAL+LIPID+MODIFICATION
8 APOLIPOPROTEIN N ACYLTRANSFERASE 153444 1% 100% 1 Search APOLIPOPROTEIN+N+ACYLTRANSFERASE Search APOLIPOPROTEIN+N+ACYLTRANSFERASE
9 CJ0090 153444 1% 100% 1 Search CJ0090 Search CJ0090
10 CO FACTOR CONTAINING LIPOPROTEINS 153444 1% 100% 1 Search CO+FACTOR+CONTAINING+LIPOPROTEINS Search CO+FACTOR+CONTAINING+LIPOPROTEINS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BUDDELMEIJER, N , (2015) THE MOLECULAR MECHANISM OF BACTERIAL LIPOPROTEIN MODIFICATION-HOW, WHEN AND WHY?.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 2. P. 246 -261 61 33% 17
2 SUTCLIFFE, IC , HARRINGTON, DJ , HUTCHINGS, MI , (2012) A PHYLUM LEVEL ANALYSIS REVEALS LIPOPROTEIN BIOSYNTHESIS TO BE A FUNDAMENTAL PROPERTY OF BACTERIA.PROTEIN & CELL. VOL. 3. ISSUE 3. P. 163-170 41 63% 14
3 ZUCKERT, WR , (2014) SECRETION OF BACTERIAL LIPOPROTEINS: THROUGH THE CYTOPLASMIC MEMBRANE, THE PERIPLASM AND BEYOND.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1509 -1516 50 40% 30
4 OKUDA, S , TOKUDA, H , (2011) LIPOPROTEIN SORTING IN BACTERIA.ANNUAL REVIEW OF MICROBIOLOGY, VOL 65. VOL. 65. ISSUE . P. 239-259 49 41% 96
5 NAKAYAMA, H , KUROKAWA, K , LEE, BL , (2012) LIPOPROTEINS IN BACTERIA: STRUCTURES AND BIOSYNTHETIC PATHWAYS.FEBS JOURNAL. VOL. 279. ISSUE 23. P. 4247-4268 52 37% 38
6 NARITA, S , TOKUDA, H , (2011) OVEREXPRESSION OF LOLCDE ALLOWS DELETION OF THE ESCHERICHIA COLI GENE ENCODING APOLIPOPROTEIN N-ACYLTRANSFERASE.JOURNAL OF BACTERIOLOGY. VOL. 193. ISSUE 18. P. 4832 -4840 33 67% 7
7 TOKUDA, H , (2009) BIOGENESIS OF OUTER MEMBRANES IN GRAM-NEGATIVE BACTERIA.BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY. VOL. 73. ISSUE 3. P. 465 -473 34 52% 76
8 MIZUTANI, M , MUKAIYAMA, K , XIAO, J , MORI, M , SATOU, R , NARITA, S , OKUDA, S , TOKUDA, H , (2013) FUNCTIONAL DIFFERENTIATION OF STRUCTURALLY SIMILAR MEMBRANE SUBUNITS OF THE ABC TRANSPORTER LOLCDE COMPLEX.FEBS LETTERS. VOL. 587. ISSUE 1. P. 23-29 21 88% 6
9 WATANABE, S , OGUCHI, Y , YOKOTA, N , TOKUDA, H , (2007) LARGE-SCALE PREPARATION OF THE HOMOGENEOUS LOLA-LIPOPROTEIN COMPLEX AND EFFICIENT IN VITRO TRANSFER OF LIPOPROTEINS TO THE OUTER MEMBRANE IN A LOLB-DEPENDENT MANNER.PROTEIN SCIENCE. VOL. 16. ISSUE 12. P. 2741 -2749 25 86% 5
10 TOKUDA, H , MIKI, K , MORI, M , NARITA, S , TAKEDA, K , TSUKAHARA, J , TSURUMIZU, R , HAYASHI, Y , (2014) ROLES OF THE PROTRUDING LOOP OF FACTOR B ESSENTIAL FOR THE LOCALIZATION OF LIPOPROTEINS ( LOLB) IN THE ANCHORING OF BACTERIAL TRIACYLATED PROTEINS TO THE OUTER MEMBRANE.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 289. ISSUE 15. P. 10530-10539 16 76% 2

Classes with closest relation at Level 1


Rank Class id link
1 2349 SECA//SECB//SECYEG
2 12801 AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX
3 15877 TWIN ARGININE TRANSLOCATION//TAT PATHWAY//TWIN ARGININE
4 12199 TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY
5 15103 HTRA1//HTRA//HTRA2
6 37527 DIVERSITY GENERATING RETROELEMENT//BIOASSAY FOR ANTIOXIDATIVE ACTIVITY//DGRSCAN
7 11653 TEICHOIC ACID//LIPOTEICHOIC ACID//WALL TEICHOIC ACID
8 18228 VTB ENZYMTECHNOL//BACILLUS SUBTILIS//CSSRS
9 17280 LIPOAMINO ACIDS//LIPOPEPTIDE//LIPIDIC AMINO ACID
10 29984 BACTEROIDES THETAIOTAOMICRON//POLYSACCHARIDE UTILIZATION LOCI//POLYSACCHARIDE UTILIZATION LOCUS

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