Class information for:
Level 1: PYOVERDIN//PYOVERDINE//SIDEROPHORE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
8716 1225 42.7 75%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
673 3       SIDEROPHORE//COLICIN//UREASE 9488
1409 2             SIDEROPHORE//COLICIN//PYOVERDIN 8013
8716 1                   PYOVERDIN//PYOVERDINE//SIDEROPHORE 1225

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PYOVERDIN authKW 1154336 5% 75% 62
2 PYOVERDINE authKW 655432 4% 56% 47
3 SIDEROPHORE authKW 535202 14% 12% 172
4 TONB authKW 480565 3% 52% 37
5 PYOCHELIN authKW 435045 2% 73% 24
6 ESBS address 229983 3% 28% 33
7 FHUA authKW 205818 1% 52% 16
8 MICROBIAL INTERACT address 188468 2% 34% 22
9 CHIM MICROBIENNE address 183537 1% 82% 9
10 RECEPTEURS PROT MEMBRANAI address 177263 2% 34% 21

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 15321 47% 0% 571
2 Biochemistry & Molecular Biology 2630 40% 0% 489
3 Biophysics 239 6% 0% 75
4 Biotechnology & Applied Microbiology 147 6% 0% 75
5 Infectious Diseases 129 4% 0% 47
6 Chemistry, Organic 48 5% 0% 56
7 Immunology 36 5% 0% 56
8 Biochemical Research Methods 35 3% 0% 34
9 Pharmacology & Pharmacy 25 5% 0% 67
10 Genetics & Heredity 23 3% 0% 41

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ESBS 229983 3% 28% 33
2 MICROBIAL INTERACT 188468 2% 34% 22
3 CHIM MICROBIENNE 183537 1% 82% 9
4 RECEPTEURS PROT MEMBRANAI 177263 2% 34% 21
5 UPR 9050 109992 1% 28% 16
6 UMR 7242 103833 1% 28% 15
7 UP A 7010 102534 1% 34% 12
8 CNRSUPR 9050 79759 0% 80% 4
9 FRE 2326 67285 1% 30% 9
10 UNITA MICROBIOL MOL 62308 0% 50% 5

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOMETALS 41908 4% 3% 54
2 JOURNAL OF BACTERIOLOGY 37786 18% 1% 224
3 MOLECULAR MICROBIOLOGY 12697 6% 1% 78
4 BIOLOGY OF METALS 9963 0% 10% 4
5 ZEITSCHRIFT FUR NATURFORSCHUNG SECTION C-A JOURNAL OF BIOSCIENCES 8257 3% 1% 40
6 MICROBIOLOGY-SGM 4787 3% 1% 39
7 ENVIRONMENTAL MICROBIOLOGY 2849 2% 1% 21
8 FEMS MICROBIOLOGY LETTERS 1873 3% 0% 35
9 ZEITSCHRIFT FUR NATURFORSCHUNG C-A JOURNAL OF BIOSCIENCES 1610 1% 1% 7
10 INFECTION AND IMMUNITY 1297 3% 0% 38

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PYOVERDIN 1154336 5% 75% 62 Search PYOVERDIN Search PYOVERDIN
2 PYOVERDINE 655432 4% 56% 47 Search PYOVERDINE Search PYOVERDINE
3 SIDEROPHORE 535202 14% 12% 172 Search SIDEROPHORE Search SIDEROPHORE
4 TONB 480565 3% 52% 37 Search TONB Search TONB
5 PYOCHELIN 435045 2% 73% 24 Search PYOCHELIN Search PYOCHELIN
6 FHUA 205818 1% 52% 16 Search FHUA Search FHUA
7 FERRIBACTIN 174476 1% 100% 7 Search FERRIBACTIN Search FERRIBACTIN
8 FEPA 159518 1% 80% 8 Search FEPA Search FEPA
9 IRON TRANSPORT 138211 3% 14% 41 Search IRON+TRANSPORT Search IRON+TRANSPORT
10 OUTER MEMBRANE RECEPTOR 126176 1% 56% 9 Search OUTER+MEMBRANE+RECEPTOR Search OUTER+MEMBRANE+RECEPTOR

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 CEZARD, C , FARVACQUES, N , SONNET, P , (2015) CHEMISTRY AND BIOLOGY OF PYOVERDINES, PSEUDOMONAS PRIMARY SIDEROPHORES.CURRENT MEDICINAL CHEMISTRY. VOL. 22. ISSUE 2. P. 165 -186 124 84% 11
2 POOLE, K , MCKAY, GA , (2003) IRON ACQUISITION AND ITS CONTROL IN PSEUDOMONAS AERUGINOSA: MANY ROADS LEAD TO ROME.FRONTIERS IN BIOSCIENCE-LANDMARK. VOL. 8. ISSUE . P. D661-D686 146 60% 69
3 POSTLE, K , KADNER, RJ , (2003) TOUCH AND GO: TYING TONB TO TRANSPORT.MOLECULAR MICROBIOLOGY. VOL. 49. ISSUE 4. P. 869-882 69 90% 198
4 SCHALK, IJ , (2008) METAL TRAFFICKING VIA SIDEROPHORES IN GRAM-NEGATIVE BACTERIA: SPECIFICITIES AND CHARACTERISTICS OF THE PYOVERDINE PATHWAY.JOURNAL OF INORGANIC BIOCHEMISTRY. VOL. 102. ISSUE 5-6. P. 1159-1169 72 77% 37
5 FARALDO-GOMEZ, JD , SANSOM, MSP , (2003) ACQUISITION OF SIDEROPHORES IN GRAM-NEGATIVE BACTERIA.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 4. ISSUE 2. P. 105-116 67 78% 189
6 BUDZIKIEWICZ, H , SCHAFER, M , MEYER, JM , (2007) SIDEROTYPING OF FLUORESCENT PSEUDOMONADS - PROBLEMS IN THE DETERMINATION OF MOLECULAR MASSES BY MASS SPECTROMETRY.MINI-REVIEWS IN ORGANIC CHEMISTRY. VOL. 4. ISSUE 3. P. 246-253 58 98% 3
7 SCHALK, IJ , GUILLON, L , (2013) PYOVERDINE BIOSYNTHESIS AND SECRETION IN PSEUDOMONAS AERUGINOSA: IMPLICATIONS FOR METAL HOMEOSTASIS.ENVIRONMENTAL MICROBIOLOGY. VOL. 15. ISSUE 6. P. 1661-1673 55 72% 35
8 MEYER, JM , GRUFFAZ, C , RAHARINOSY, V , BEZVERBNAYA, I , SCHAFER, M , BUDZIKIEWICZ, H , (2008) SIDEROTYPING OF FLUORESCENT PSEUDOMONAS: MOLECULAR MASS DETERMINATION BY MASS SPECTROMETRY AS A POWERFUL PYOVERDINE SIDEROTYPING METHOD.BIOMETALS. VOL. 21. ISSUE 3. P. 259 -271 50 100% 34
9 VAKHARIA-RAO, H , KASTEAD, KA , SAVENKOVA, MI , BULATHSINGHALA, CM , POSTLE, K , (2007) DELETION AND SUBSTITUTION ANALYSIS OF THE ESCHERICHIA COLI TONB Q160 REGION.JOURNAL OF BACTERIOLOGY. VOL. 189. ISSUE 13. P. 4662-4670 63 88% 4
10 POSTLE, K , LARSEN, RA , (2007) TONB-DEPENDENT ENERGY TRANSDUCTION BETWEEN OUTER AND CYTOPLASMIC MEMBRANES.BIOMETALS. VOL. 20. ISSUE 3-4. P. 453-465 55 85% 90

Classes with closest relation at Level 1


Rank Class id link
1 5568 SIDEROPHORE//ENTEROBACTIN//AMPHIPHILIC SIDEROPHORES
2 14077 TRANSFERRIN BINDING PROTEIN//AEROBACTIN//TBPA
3 13454 VERDOHEME//HEME DEGRADATION//UNITE MEMBRANES BACTERIENNES
4 8298 COLICIN//COLICIN E1//PYOCIN
5 26783 LUPINUS PILOSUS MURR//FERRICHROME UPTAKE//FHU GENES
6 7584 FERRIC UPTAKE REGULATOR//FUR//NIKR
7 5827 PORIN//MALTOPORIN//OUTER MEMBRANE PROTEIN
8 1479 2 4 DIACETYLPHLOROGLUCINOL//FLUORESCENT PSEUDOMONADS//PGPR
9 31018 BACTERIOPHAGE T5//22 KD ZEIN MESSENGER RNAS//CHEMICOENZYMATIC SYNTHESIS
10 22540 GOULDS S1//HYPERVARIABLE SEQUENCE REGIONS//PSEUDOMONAS STRAMINEA

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