Class information for:
Level 2: SIDEROPHORE//COLICIN//PYOVERDIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
1409 8013 41.8 72%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
673 3       SIDEROPHORE//COLICIN//UREASE 9488
1409 2             SIDEROPHORE//COLICIN//PYOVERDIN 8013
5568 1                   SIDEROPHORE//ENTEROBACTIN//AMPHIPHILIC SIDEROPHORES 1604
7584 1                   FERRIC UPTAKE REGULATOR//FUR//NIKR 1351
8298 1                   COLICIN//COLICIN E1//PYOCIN 1269
8716 1                   PYOVERDIN//PYOVERDINE//SIDEROPHORE 1225
13454 1                   VERDOHEME//HEME DEGRADATION//UNITE MEMBRANES BACTERIENNES 835
14077 1                   TRANSFERRIN BINDING PROTEIN//AEROBACTIN//TBPA 794
15827 1                   AFT1//FET3//SIDEROPHORE 690
26783 1                   LUPINUS PILOSUS MURR//FERRICHROME UPTAKE//FHU GENES 245

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SIDEROPHORE authKW 965438 7% 43% 591
2 COLICIN authKW 338449 2% 72% 124
3 PYOVERDIN authKW 182103 1% 76% 63
4 TONB authKW 150662 1% 75% 53
5 IRON TRANSPORT authKW 120592 1% 32% 98
6 IRON UPTAKE authKW 107158 1% 29% 97
7 PYOVERDINE authKW 104428 1% 57% 48
8 BIOMETALS journal 95801 3% 12% 209
9 FERRIC UPTAKE REGULATOR authKW 91464 0% 69% 35
10 IRON ACQUISITION authKW 88323 1% 41% 57

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Microbiology 62593 37% 1% 2979
2 Biochemistry & Molecular Biology 14318 37% 0% 2957
3 Infectious Diseases 1949 5% 0% 432
4 Biotechnology & Applied Microbiology 998 6% 0% 497
5 Biophysics 967 5% 0% 407
6 Immunology 964 7% 0% 570
7 Chemistry, Inorganic & Nuclear 786 5% 0% 368
8 Mycology 481 1% 0% 92
9 Chemistry, Multidisciplinary 159 6% 0% 499
10 Genetics & Heredity 146 3% 0% 265

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UNITE MEMBRANES BACTERIENNES 57172 0% 52% 29
2 CHIM MICROBIENNE 41897 0% 100% 11
3 MICROBIAL INTERACT 37165 0% 39% 25
4 RECEPTEURS PROT MEMBRANAI 35355 0% 39% 24
5 ESBS 35103 0% 28% 33
6 INGN SYST MACROMOL 22408 0% 17% 34
7 UPR 9050 21252 0% 31% 18
8 UMR 7242 20361 0% 31% 17
9 UPR 9027 17282 0% 23% 20
10 UP A 7010 15655 0% 34% 12

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOMETALS 95801 3% 12% 209
2 JOURNAL OF BACTERIOLOGY 71493 10% 2% 792
3 MOLECULAR MICROBIOLOGY 33257 4% 3% 324
4 BIOLOGY OF METALS 18645 0% 35% 14
5 INFECTION AND IMMUNITY 14060 4% 1% 318
6 FEMS MICROBIOLOGY LETTERS 13716 3% 2% 242
7 MICROBIOLOGY-SGM 13143 2% 2% 166
8 METALLOMICS 11593 1% 5% 56
9 JOURNAL OF GENERAL MICROBIOLOGY 5459 1% 2% 88
10 BIOCHEMISTRY 5055 3% 1% 277

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SIDEROPHORE 965438 7% 43% 591 Search SIDEROPHORE Search SIDEROPHORE
2 COLICIN 338449 2% 72% 124 Search COLICIN Search COLICIN
3 PYOVERDIN 182103 1% 76% 63 Search PYOVERDIN Search PYOVERDIN
4 TONB 150662 1% 75% 53 Search TONB Search TONB
5 IRON TRANSPORT 120592 1% 32% 98 Search IRON+TRANSPORT Search IRON+TRANSPORT
6 IRON UPTAKE 107158 1% 29% 97 Search IRON+UPTAKE Search IRON+UPTAKE
7 PYOVERDINE 104428 1% 57% 48 Search PYOVERDINE Search PYOVERDINE
8 FERRIC UPTAKE REGULATOR 91464 0% 69% 35 Search FERRIC+UPTAKE+REGULATOR Search FERRIC+UPTAKE+REGULATOR
9 IRON ACQUISITION 88323 1% 41% 57 Search IRON+ACQUISITION Search IRON+ACQUISITION
10 ENTEROBACTIN 85450 0% 61% 37 Search ENTEROBACTIN Search ENTEROBACTIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 CASCALES, E , BUCHANAN, SK , DUCHE, D , KLEANTHOUS, C , LLOUBES, R , POSTLE, K , RILEY, M , SLATIN, S , CAVARD, D , (2007) COLICIN BIOLOGY.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 71. ISSUE 1. P. 158 -229 445 77% 335
2 SHELDON, JR , HEINRICHS, DE , (2015) RECENT DEVELOPMENTS IN UNDERSTANDING THE IRON ACQUISITION STRATEGIES OF GRAM POSITIVE PATHOGENS.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 4. P. 592 -630 258 68% 20
3 RATLEDGE, C , DOVER, LG , (2000) IRON METABOLISM IN PATHOGENIC BACTERIA.ANNUAL REVIEW OF MICROBIOLOGY. VOL. 54. ISSUE . P. 881 -941 222 71% 835
4 KIM, YC , TARR, AW , PENFOLD, CN , (2014) COLICIN IMPORT INTO E. COLI CELLS: A MODEL SYSTEM FOR INSIGHTS INTO THE IMPORT MECHANISMS OF BACTERIOCINS.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1717 -1731 195 88% 3
5 MIETHKE, M , MARAHIEL, MA , (2007) SIDEROPHORE-BASED IRON ACQUISITION AND PATHOGEN CONTROL.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 71. ISSUE 3. P. 413-+ 187 56% 468
6 CEZARD, C , FARVACQUES, N , SONNET, P , (2015) CHEMISTRY AND BIOLOGY OF PYOVERDINES, PSEUDOMONAS PRIMARY SIDEROPHORES.CURRENT MEDICINAL CHEMISTRY. VOL. 22. ISSUE 2. P. 165 -186 134 91% 11
7 ROHDE, KH , DYER, DW , (2003) MECHANISMS OF IRON ACQUISITION BY THE HUMAN PATHOGENS NEISSERIA MENINGITIDIS AND NEISSERIA GONORRHOEAE.FRONTIERS IN BIOSCIENCE-LANDMARK. VOL. 8. ISSUE . P. D1186-D1218 224 75% 16
8 FILLAT, MF , (2014) THE FUR (FERRIC UPTAKE REGULATOR) SUPERFAMILY: DIVERSITY AND VERSATILITY OF KEY TRANSCRIPTIONAL REGULATORS.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 546. ISSUE . P. 41 -52 131 69% 48
9 SAHA, R , SAHA, N , DONOFRIO, RS , BESTERVELT, LL , (2013) MICROBIAL SIDEROPHORES: A MINI REVIEW.JOURNAL OF BASIC MICROBIOLOGY. VOL. 53. ISSUE 4. P. 303 -317 136 70% 58
10 CAZA, M , KRONSTAD, JW , (2013) SHARED AND DISTINCT MECHANISMS OF IRON ACQUISITION BY BACTERIAL AND FUNGAL PATHOGENS OF HUMANS.FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. VOL. 3. ISSUE . P. - 187 60% 19

Classes with closest relation at Level 2


Rank Class id link
1 3468 METALLACROWN//AMINOHYDROXAMIC ACIDS//HYDROXAMIC ACID
2 2794 ERGOTHIONEINE//CATALASE PEROXIDASE//MYCOTHIOL
3 3688 LIPOCALIN 2//APOLIPOPROTEIN D//ZINC ALPHA 2 GLYCOPROTEIN
4 3479 UREASE//UREASE INHIBITION//UREASE INHIBITOR
5 892 PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA
6 910 QUORUM SENSING//PSEUDOMONAS AERUGINOSA//N ACYL HOMOSERINE LACTONE
7 1335 NEISSERIA MENINGITIDIS//NEISSERIA GONORRHOEAE//MENINGOCOCCAL DISEASE
8 1113 WILSONS DISEASE//METALLOTHIONEIN//ATP7B
9 2596 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//ACTA CRYSTALLOGRAPHICA SECTION A//ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
10 751 PGPR//AZOSPIRILLUM//PLANT GROWTH PROMOTING RHIZOBACTERIA

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