Class information for:
Level 1: DIFFERENTIAL GENE EXPRESSION DETECTION//CANC GENOME DISCOVERY CCGD//CANCER GENE ACTIVATION HETEROGENEITY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
37522 55 32.0 85%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
868 2             BMC BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS 11572
37522 1                   DIFFERENTIAL GENE EXPRESSION DETECTION//CANC GENOME DISCOVERY CCGD//CANCER GENE ACTIVATION HETEROGENEITY 55

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DIFFERENTIAL GENE EXPRESSION DETECTION authKW 1665585 5% 100% 3
2 CANC GENOME DISCOVERY CCGD address 555195 2% 100% 1
3 CANCER GENE ACTIVATION HETEROGENEITY authKW 555195 2% 100% 1
4 DEV EXCELLENCE ASIA PACIFICCHUO KU address 555195 2% 100% 1
5 DMICE address 555195 2% 100% 1
6 EXCRETION AND TOXICITY ADME TOX authKW 555195 2% 100% 1
7 GENEGO DATABASE authKW 555195 2% 100% 1
8 METADRUG TM authKW 555195 2% 100% 1
9 OPEN ENDED CATEGORIES authKW 555195 2% 100% 1
10 OUTLIER ROBUST T STATISTIC authKW 555195 2% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Mathematical & Computational Biology 2388 38% 0% 21
2 Statistics & Probability 508 24% 0% 13
3 Biochemical Research Methods 123 16% 0% 9
4 Oncology 121 25% 0% 14
5 Biotechnology & Applied Microbiology 112 20% 0% 11
6 Genetics & Heredity 94 18% 0% 10
7 Multidisciplinary Sciences 53 5% 0% 3
8 Computer Science, Interdisciplinary Applications 18 5% 0% 3
9 Biology 16 5% 0% 3
10 Medical Informatics 10 2% 0% 1

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CANC GENOME DISCOVERY CCGD 555195 2% 100% 1
2 DEV EXCELLENCE ASIA PACIFICCHUO KU 555195 2% 100% 1
3 DMICE 555195 2% 100% 1
4 PHPM 185064 2% 33% 1
5 GENE VIRAL THER Y 138795 4% 13% 2
6 CANC STEM CELL INNOVAT CAST 111037 2% 20% 1
7 UNIT 1374 101969 5% 6% 3
8 RONALD A MATRICARIA MOL MED 92531 2% 17% 1
9 SPLEEN STOMACH DIS 79312 2% 14% 1
10 BLOOD DNA PROFILING IL 69398 2% 13% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOSTATISTICS 11499 7% 1% 4
2 BMC MEDICAL GENOMICS 3038 4% 0% 2
3 CANCER GENOMICS & PROTEOMICS 2642 2% 0% 1
4 COMPUTATIONAL BIOLOGY AND CHEMISTRY 2534 4% 0% 2
5 INTERNATIONAL JOURNAL OF BIOSTATISTICS 2412 2% 0% 1
6 ONCOGENESIS 2109 2% 0% 1
7 COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 1724 4% 0% 2
8 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY 1515 2% 0% 1
9 BMC SYSTEMS BIOLOGY 1382 4% 0% 2
10 BIOINFORMATICS 1300 9% 0% 5

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DIFFERENTIAL GENE EXPRESSION DETECTION 1665585 5% 100% 3 Search DIFFERENTIAL+GENE+EXPRESSION+DETECTION Search DIFFERENTIAL+GENE+EXPRESSION+DETECTION
2 CANCER GENE ACTIVATION HETEROGENEITY 555195 2% 100% 1 Search CANCER+GENE+ACTIVATION+HETEROGENEITY Search CANCER+GENE+ACTIVATION+HETEROGENEITY
3 EXCRETION AND TOXICITY ADME TOX 555195 2% 100% 1 Search EXCRETION+AND+TOXICITY+ADME+TOX Search EXCRETION+AND+TOXICITY+ADME+TOX
4 GENEGO DATABASE 555195 2% 100% 1 Search GENEGO+DATABASE Search GENEGO+DATABASE
5 METADRUG TM 555195 2% 100% 1 Search METADRUG+TM Search METADRUG+TM
6 OPEN ENDED CATEGORIES 555195 2% 100% 1 Search OPEN+ENDED+CATEGORIES Search OPEN+ENDED+CATEGORIES
7 OUTLIER ROBUST T STATISTIC 555195 2% 100% 1 Search OUTLIER+ROBUST+T+STATISTIC Search OUTLIER+ROBUST+T+STATISTIC
8 STATISTIC METHODOLOGY 555195 2% 100% 1 Search STATISTIC+METHODOLOGY Search STATISTIC+METHODOLOGY
9 SUBPATH 555195 2% 100% 1 Search SUBPATH Search SUBPATH
10 TRI MEAN 555195 2% 100% 1 Search TRI+MEAN Search TRI+MEAN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 EMERSON, SC , EMERSON, SS , (2013) DETECTING DIFFERENTIAL GENE EXPRESSION IN SUBGROUPS OF A DISEASE POPULATION.INTERNATIONAL JOURNAL OF BIOSTATISTICS. VOL. 9. ISSUE 1. P. 95-108 4 80% 0
2 BOTTOMLY, D , RYABININ, PA , TYNER, JW , CHANG, BH , LORIAUX, MM , DRUKER, BJ , MCWEENEY, SK , WILMOT, B , (2013) COMPARISON OF METHODS TO IDENTIFY ABERRANT EXPRESSION PATTERNS IN INDIVIDUAL PATIENTS: AUGMENTING OUR TOOLKIT FOR PRECISION MEDICINE.GENOME MEDICINE. VOL. 5. ISSUE . P. - 12 25% 1
3 JI, ZH , WU, CG , WANG, Y , GUAN, RC , TU, HW , WU, XZ , LIANG, YC , (2012) TRI-MEAN-BASED STATISTICAL DIFFERENTIAL GENE EXPRESSION DETECTION.INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS. VOL. 6. ISSUE 3. P. 255-271 6 38% 0
4 WANG, Y , WU, CG , JI, ZH , WANG, BH , LIANG, YC , (2011) NON-PARAMETRIC CHANGE-POINT METHOD FOR DIFFERENTIAL GENE EXPRESSION DETECTION.PLOS ONE. VOL. 6. ISSUE 5. P. - 6 33% 16
5 HSU, CL , LEE, WC , (2010) DETECTING DIFFERENTIALLY EXPRESSED GENES IN HETEROGENEOUS DISEASES USING HALF STUDENT'S T-TEST.INTERNATIONAL JOURNAL OF EPIDEMIOLOGY. VOL. 39. ISSUE 6. P. 1597 -1604 5 31% 2
6 DE RONDE, JJ , RIGAILL, G , ROTTENBERG, S , RODENHUIS, S , WESSELS, LFA , (2013) IDENTIFYING SUBGROUP MARKERS IN HETEROGENEOUS POPULATIONS.NUCLEIC ACIDS RESEARCH. VOL. 41. ISSUE 21. P. - 4 31% 5
7 RODEN, DL , SEWELL, GW , LOBLEY, A , LEVINE, AP , SMITH, AM , SEGAL, AW , (2014) ZODET: SOFTWARE FOR THE IDENTIFICATION, ANALYSIS AND VISUALISATION OF OUTLIER GENES IN MICROARRAY EXPRESSION DATA.PLOS ONE. VOL. 9. ISSUE 1. P. - 4 27% 1
8 WANG, HW , SUN, Q , ZHAO, WY , QI, LS , GU, YY , LI, PF , ZHANG, MM , LI, Y , LIU, SL , GUO, Z , (2015) INDIVIDUAL-LEVEL ANALYSIS OF DIFFERENTIAL EXPRESSION OF GENES AND PATHWAYS FOR PERSONALIZED MEDICINE.BIOINFORMATICS. VOL. 31. ISSUE 1. P. 62 -68 6 16% 4
9 MPINDI, JP , SARA, H , HAAPA-PAANANEN, S , KILPINEN, S , PISTO, T , BUCHER, E , OJALA, K , ILJIN, K , VAINIO, P , BJORKMAN, M , ET AL (2011) GTI: A NOVEL ALGORITHM FOR IDENTIFYING OUTLIER GENE EXPRESSION PROFILES FROM INTEGRATED MICROARRAY DATASETS.PLOS ONE. VOL. 6. ISSUE 2. P. - 5 20% 12
10 GLEISS, A , SANCHEZ-CABO, F , PERCO, P , TONG, D , HEINZE, G , (2011) ADAPTIVE TRIMMED T-STATISTICS FOR IDENTIFYING PREDOMINANTLY HIGH EXPRESSION IN A MICROARRAY EXPERIMENT.STATISTICS IN MEDICINE. VOL. 30. ISSUE 1. P. 52-61 4 25% 4

Classes with closest relation at Level 1


Rank Class id link
1 2901 BMC BIOINFORMATICS//MICROARRAY IMAGE//BIOINFORMATICS
2 8778 PCA3//TMPRSS2 ERG//PROSTATE CANCER ANTIGEN 3
3 9574 GENE SET ANALYSIS//GENE ONTOLOGY//BMC BIOINFORMATICS
4 35322 LAPTM4B//LAPTM4B 35//LYSOSOMAL PROTEIN TRANSMEMBRANE 4 BETA
5 31695 STATISTICAL ADEQUACY//BAYESIAN EXPERIMENT//MIS SPECIFICATION TESTING
6 5338 FALSE DISCOVERY RATE//MULTIPLE TESTING//FAMILYWISE ERROR RATE
7 32453 CXCL14//DBC2//BRAK
8 22399 LUNG CANCER DIAGNOSIS AND PROGNOSIS//AIRWAY EPITHELIUM DEVELOPMENT//ANAT CYTOL PATHOL ALBERT BONNIOT
9 20966 DYNAMICAL NETWORK BIOMARKER//EDGE BIOMARKER//ABORAT INNOVAT MATH MODELLING
10 36329 GYNECOL BREAST//GYNECOL BREAST PATHOL//MYOEPITHELIAL CELL LAYER

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