Class information for:
Level 1: ARTIFICIAL TRANSFORMATION//E COLI COMPETENCE//SXY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
21303 425 31.5 48%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
3063 2             DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE 2429
21303 1                   ARTIFICIAL TRANSFORMATION//E COLI COMPETENCE//SXY 425

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ARTIFICIAL TRANSFORMATION authKW 143694 0% 100% 2
2 E COLI COMPETENCE authKW 143694 0% 100% 2
3 SXY authKW 143694 0% 100% 2
4 UPTAKE SIGNAL SEQUENCE authKW 143694 0% 100% 2
5 COMPETENT CELLS authKW 138161 1% 38% 5
6 ANTIBIOTICS RESISTANT BACTERIUM authKW 71847 0% 100% 1
7 BBSV COMOVIRUS authKW 71847 0% 100% 1
8 CACL2 METHOD authKW 71847 0% 100% 1
9 CELL TO CELL TRANSFORMATION authKW 71847 0% 100% 1
10 CHEMOPORATION authKW 71847 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 6296 51% 0% 215
2 Genetics & Heredity 605 17% 0% 71
3 Biochemistry & Molecular Biology 237 23% 0% 98
4 Biotechnology & Applied Microbiology 154 9% 0% 40
5 Biology 120 5% 0% 23
6 Biophysics 99 7% 0% 28
7 Virology 47 3% 0% 13
8 Biochemical Research Methods 7 2% 0% 10
9 Evolutionary Biology 3 1% 0% 4
10 Toxicology 2 1% 0% 6

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EPFL SV UPBLOGLOBAL HLTH STN 19 71847 0% 100% 1
2 LANZHOU ANIM HUSB VET MED 71847 0% 100% 1
3 MS CHANDLER MED 423 71847 0% 100% 1
4 NORMAN BLDG PLANT SCI 71847 0% 100% 1
5 PLANT PROTECT MICRIOBIOL 71847 0% 100% 1
6 SENTER VITSK STEORI 71847 0% 100% 1
7 STATE VIROL LIFE SCI 71847 0% 100% 1
8 LIFE SCI ZOOL 30786 1% 14% 3
9 GLOBAL HLTH MOL MICROBIOL 23948 0% 33% 1
10 LIFE SCISTATE VIROL 23948 0% 33% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 23547 24% 0% 104
2 ZENTRALBLATT FUR BAKTERIOLOGIE PARASITENKUNDE INFEKTIONSKRANKHEITEN UND HYGIENE II ABTEILUNG-NATURWISSENSCHAFTLICHE-MIKROBIOLOGIE DER LANDWIRTSCHAFT DER TECHNOLOGIE 12429 1% 6% 3
3 ACTA MICROBIOLOGICA POLONICA 5137 1% 1% 5
4 GENE 2110 6% 0% 24
5 MOLECULAR AND GENERAL GENETICS 1794 3% 0% 11
6 FEMS MICROBIOLOGY LETTERS 1287 4% 0% 17
7 METHODS IN MOLECULAR AND CELLULAR BIOLOGY 1157 0% 2% 1
8 CANADIAN JOURNAL OF MICROBIOLOGY 935 2% 0% 9
9 JOURNAL OF BIOSCIENCES 732 1% 0% 5
10 CURRENT MICROBIOLOGY 598 2% 0% 7

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ARTIFICIAL TRANSFORMATION 143694 0% 100% 2 Search ARTIFICIAL+TRANSFORMATION Search ARTIFICIAL+TRANSFORMATION
2 E COLI COMPETENCE 143694 0% 100% 2 Search E+COLI+COMPETENCE Search E+COLI+COMPETENCE
3 SXY 143694 0% 100% 2 Search SXY Search SXY
4 UPTAKE SIGNAL SEQUENCE 143694 0% 100% 2 Search UPTAKE+SIGNAL+SEQUENCE Search UPTAKE+SIGNAL+SEQUENCE
5 COMPETENT CELLS 138161 1% 38% 5 Search COMPETENT+CELLS Search COMPETENT+CELLS
6 ANTIBIOTICS RESISTANT BACTERIUM 71847 0% 100% 1 Search ANTIBIOTICS+RESISTANT+BACTERIUM Search ANTIBIOTICS+RESISTANT+BACTERIUM
7 BBSV COMOVIRUS 71847 0% 100% 1 Search BBSV+COMOVIRUS Search BBSV+COMOVIRUS
8 CACL2 METHOD 71847 0% 100% 1 Search CACL2+METHOD Search CACL2+METHOD
9 CELL TO CELL TRANSFORMATION 71847 0% 100% 1 Search CELL+TO+CELL+TRANSFORMATION Search CELL+TO+CELL+TRANSFORMATION
10 CHEMOPORATION 71847 0% 100% 1 Search CHEMOPORATION Search CHEMOPORATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 SINHA, S , MELL, J , REDFIELD, R , (2013) THE AVAILABILITY OF PURINE NUCLEOTIDES REGULATES NATURAL COMPETENCE BY CONTROLLING TRANSLATION OF THE COMPETENCE ACTIVATOR SXY.MOLECULAR MICROBIOLOGY. VOL. 88. ISSUE 6. P. 1106 -1119 28 64% 10
2 SINHA, S , REDFIELD, RJ , (2012) NATURAL DNA UPTAKE BY ESCHERICHIA COLI.PLOS ONE. VOL. 7. ISSUE 4. P. - 29 59% 12
3 MELL, JC , REDFIELD, RJ , (2014) NATURAL COMPETENCE AND THE EVOLUTION OF DNA UPTAKE SPECIFICITY.JOURNAL OF BACTERIOLOGY. VOL. 196. ISSUE 8. P. 1471-1483 35 30% 21
4 MACFADYEN, LP , CHEN, D , VO, HC , LIAO, D , SINOTTE, R , REDFIELD, RJ , (2001) COMPETENCE DEVELOPMENT BY HAEMOPHILUS INFLUENZAE IS REGULATED BY THE AVAILABILITY OF NUCLEIC ACID PRECURSORS.MOLECULAR MICROBIOLOGY. VOL. 40. ISSUE 3. P. 700 -707 19 76% 34
5 REDFIELD, RJ , CAMERON, ADS , QIAN, Q , HINDS, J , ALI, TR , KROLL, JS , LANGFORD, PR , (2005) A NOVEL CRP-DEPENDENT OF COMPETENCE GENES IN REGULON CONTROLS EXPRESSION HAEMOPHILUS INFLUENZAE.JOURNAL OF MOLECULAR BIOLOGY. VOL. 347. ISSUE 4. P. 735-747 23 42% 71
6 SINHA, S , CAMERON, ADS , REDFIELD, RJ , (2009) SXY INDUCES A CRP-S REGULON IN ESCHERICHIA COLI.JOURNAL OF BACTERIOLOGY. VOL. 191. ISSUE 16. P. 5180 -5195 27 34% 16
7 MATSUDA, A , KURONO, N , KAWANO, C , SHIROTA, K , HIRABAYASHI, A , HORINO, M , ETCHUYA, R , SOBUE, R , SASAKI, Y , MIYAUE, S , ET AL (2012) GENOME-WIDE SCREEN FOR ESCHERICHIA COLI GENES INVOLVED IN REPRESSING CELL-TO-CELL TRANSFER OF NON-CONJUGATIVE PLASMIDS.BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. VOL. 428. ISSUE 4. P. 445-450 15 54% 2
8 MA, C , REDFIELD, RJ , (2000) POINT MUTATIONS IN A PEPTIDOGLYCAN BIOSYNTHESIS GENE CAUSE COMPETENCE INDUCTION IN HAEMOPHILUS INFLUENZAE.JOURNAL OF BACTERIOLOGY. VOL. 182. ISSUE 12. P. 3323 -3330 18 60% 6
9 METZGER, LC , BLOKESCH, M , (2016) REGULATION OF COMPETENCE-MEDIATED HORIZONTAL GENE TRANSFER IN THE NATURAL HABITAT OF VIBRIO CHOLERAE.CURRENT OPINION IN MICROBIOLOGY. VOL. 30. ISSUE . P. 1 -7 16 33% 4
10 TOMB, JF , BARCAK, GJ , CHANDLER, MS , REDFIELD, RJ , SMITH, HO , (1989) TRANSPOSON MUTAGENESIS, CHARACTERIZATION, AND CLONING OF TRANSFORMATION GENES OF HEMOPHILUS-INFLUENZAE RD.JOURNAL OF BACTERIOLOGY. VOL. 171. ISSUE 7. P. 3796-3802 20 71% 60

Classes with closest relation at Level 1


Rank Class id link
1 12710 DISSOLVED DNA//DNA EXTRACTION//NATURAL TRANSFORMATION
2 12199 TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY
3 3489 HAEMOPHILUS INFLUENZAE//NONTYPEABLE HAEMOPHILUS INFLUENZAE//NTHI
4 12264 PLASMID//ROLLING CIRCLE REPLICATION//CRYPTIC PLASMID
5 32149 MINIATURE INSERTION SEQUENCE//REPEATED DNA FAMILIES//AVENTIS UMR 1889
6 6379 STREPTOCOCCUS MUTANS//GLUCOSYLTRANSFERASE//ORAL BIOL
7 20234 RECOMBINATION DETECTION//SPECIES CONCEPT//PERIODIC SELECTION
8 30366 CALMODULIN LIKE PROTEIN//ACRAB MULTIDRUG PUMP//AEQUORIN RECONSTITUTION
9 10322 ELECTROFUSION//BIOELECTROCHEMISTRY AND BIOENERGETICS//CELL ELECTROFUSION
10 31931 BAYERS JUNCTIONS//DNA MEMBRANE COMPLEXES//DNA MEMBRANE CONTACTS

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