Class information for:
Level 1: INTRON MEDIATED ENHANCEMENT//INTRON//IME

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
28145 213 43.2 86%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
28145 1                   INTRON MEDIATED ENHANCEMENT//INTRON//IME 213

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INTRON MEDIATED ENHANCEMENT authKW 1343976 7% 63% 15
2 INTRON authKW 319047 23% 4% 50
3 IME authKW 303575 3% 35% 6
4 IMETER authKW 286717 1% 100% 2
5 5 UTR INTRON authKW 191144 1% 67% 2
6 LEADER INTRON authKW 191140 2% 33% 4
7 AC BASED GENE TRAP authKW 143359 0% 100% 1
8 AGROINFILTRATION NORMALIZATION authKW 143359 0% 100% 1
9 BIOVEX LTD address 143359 0% 100% 1
10 CASTOR BEAN CATALASE INTRON authKW 143359 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Plant Sciences 3090 53% 0% 112
2 Biochemistry & Molecular Biology 856 53% 0% 112
3 Genetics & Heredity 91 10% 0% 21
4 Cell Biology 65 11% 0% 23
5 Biotechnology & Applied Microbiology 44 8% 0% 16
6 Biochemical Research Methods 27 5% 0% 10
7 Developmental Biology 12 2% 0% 4
8 Biology 12 3% 0% 6
9 Horticulture 11 1% 0% 3
10 Biophysics 2 2% 0% 5

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOVEX LTD 143359 0% 100% 1
2 HORTCULTURE CROP SCI 143359 0% 100% 1
3 MOL PLANT VIROL PLANNT GENET ENGN 143359 0% 100% 1
4 YUANPEI MED TECHNOL 143359 0% 100% 1
5 BEREICH MOL BIOL INFORMAT 71678 0% 50% 1
6 USACE 71678 0% 50% 1
7 CELL MOL GENET 54606 2% 10% 4
8 OARDC 52714 4% 5% 8
9 UNIT GENE EXP S 47785 0% 33% 1
10 SEZ BOT GEN 31854 1% 11% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PLANT MOLECULAR BIOLOGY 12336 11% 0% 24
2 PLANT JOURNAL 7156 9% 0% 19
3 PLANT SCIENCE 1711 4% 0% 9
4 BMC PLANT BIOLOGY 1532 2% 0% 5
5 PLANT CELL REPORTS 1300 3% 0% 7
6 PLANT PHYSIOLOGY 1137 6% 0% 13
7 PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1074 1% 0% 2
8 PLANT MOLECULAR BIOLOGY REPORTER 928 1% 0% 3
9 PLANT BIOTECHNOLOGY 841 1% 0% 2
10 NUCLEIC ACIDS RESEARCH 695 7% 0% 14

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 INTRON MEDIATED ENHANCEMENT 1343976 7% 63% 15 Search INTRON+MEDIATED+ENHANCEMENT Search INTRON+MEDIATED+ENHANCEMENT
2 INTRON 319047 23% 4% 50 Search INTRON Search INTRON
3 IME 303575 3% 35% 6 Search IME Search IME
4 IMETER 286717 1% 100% 2 Search IMETER Search IMETER
5 5 UTR INTRON 191144 1% 67% 2 Search 5+UTR+INTRON Search 5+UTR+INTRON
6 LEADER INTRON 191140 2% 33% 4 Search LEADER+INTRON Search LEADER+INTRON
7 AC BASED GENE TRAP 143359 0% 100% 1 Search AC+BASED+GENE+TRAP Search AC+BASED+GENE+TRAP
8 AGROINFILTRATION NORMALIZATION 143359 0% 100% 1 Search AGROINFILTRATION+NORMALIZATION Search AGROINFILTRATION+NORMALIZATION
9 CASTOR BEAN CATALASE INTRON 143359 0% 100% 1 Search CASTOR+BEAN+CATALASE+INTRON Search CASTOR+BEAN+CATALASE+INTRON
10 CHIMERIC GENES 3 UTR 143359 0% 100% 1 Search CHIMERIC+GENES+3+UTR Search CHIMERIC+GENES+3+UTR

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 MORELLO, L , GIANI, S , TROINA, F , BREVIARIO, D , (2011) TESTING THE IMETER ON RICE INTRONS AND OTHER ASPECTS OF INTRON-MEDIATED ENHANCEMENT OF GENE EXPRESSION.JOURNAL OF EXPERIMENTAL BOTANY. VOL. 62. ISSUE 2. P. 533 -544 34 67% 13
2 LAXA, M , (2017) INTRON-MEDIATED ENHANCEMENT: A TOOL FOR HETEROLOGOUS GENE EXPRESSION IN PLANTS?.FRONTIERS IN PLANT SCIENCE. VOL. 7. ISSUE . P. - 49 40% 0
3 ROSE, AB , ELFERSI, T , PARRA, G , KORF, I , (2008) PROMOTER-PROXIMAL INTRONS IN ARABIDOPSIS THALIANA ARE ENRICHED IN DISPERSED SIGNALS THAT ELEVATE GENE EXPRESSION.PLANT CELL. VOL. 20. ISSUE 3. P. 543-551 33 52% 66
4 GALLEGOS, JE , ROSE, AB , (2015) THE ENDURING MYSTERY OF INTRON-MEDIATED ENHANCEMENT.PLANT SCIENCE. VOL. 237. ISSUE . P. 8 -15 23 53% 14
5 ZHANG, N , MCHALE, LK , FINER, JJ , (2016) A LEADER INTRON OF A SOYBEAN ELONGATION FACTOR 1A (EEF1A) GENE INTERACTS WITH PROXIMAL PROMOTER ELEMENTS TO REGULATE GENE EXPRESSION IN SYNTHETIC PROMOTERS.PLOS ONE. VOL. 11. ISSUE 11. P. - 29 51% 0
6 ROSE, AB , (2008) INTRON-MEDIATED REGULATION OF GENE EXPRESSION.NUCLEAR PRE-MRNA PROCESSING IN PLANTS. VOL. 326. ISSUE . P. 277-290 29 47% 93
7 CLANCY, M , HANNAH, LC , (2002) SPLICING OF THE MAIZE SH1 FIRST INTRON IS ESSENTIAL FOR ENHANCEMENT OF GENE EXPRESSION, AND A T-RICH MOTIF INCREASES EXPRESSION WITHOUT AFFECTING SPLICING.PLANT PHYSIOLOGY. VOL. 130. ISSUE 2. P. 918-929 33 54% 60
8 SIMPSON, CG , JENNINGS, SN , CLARK, GP , THOW, G , BROWN, JWS , (2004) DUAL FUNCTIONALITY OF A PLANT U-RICH INTRONIC SEQUENCE ELEMENT.PLANT JOURNAL. VOL. 37. ISSUE 1. P. 82-91 32 52% 17
9 KEMPE, K , RUBTSOVA, M , RIEWE, D , GILS, M , (2013) THE PRODUCTION OF MALE-STERILE WHEAT PLANTS THROUGH SPLIT BARNASE EXPRESSION IS PROMOTED BY THE INSERTION OF INTRONS AND FLEXIBLE PEPTIDE LINKERS.TRANSGENIC RESEARCH. VOL. 22. ISSUE 6. P. 1089 -1105 24 45% 1
10 SIMPSON, CG , CLARK, GP , LYON, JM , WATTERS, J , MCQUADE, C , BROWN, JWS , (1999) INTERACTIONS BETWEEN INTRONS VIA EXON DEFINITION IN PLANT PRE-MRNA SPLICING.PLANT JOURNAL. VOL. 18. ISSUE 3. P. 293-302 26 59% 10

Classes with closest relation at Level 1


Rank Class id link
1 17904 INTRON GAIN//INTRON LOSS//INTRON EVOLUTION
2 3668 SPLICEOSOME//PRE MRNA SPLICING//SNRNP
3 851 IMMATURE EMBRYOS//PARTICLE BOMBARDMENT//MICROPROJECTILE BOMBARDMENT
4 13820 RBCS MULTIGENE FAMILY//CAB GENES//RBCS
5 785 SR PROTEINS//ALTERNATIVE SPLICING//POLYPYRIMIDINE TRACT BINDING PROTEIN
6 9109 SNAPC//SNRNA GENES//ZNF143
7 7239 TRANSPOSON TAGGING//AC DS//GENE TAGGING
8 10335 NMD//UPF1//NONSENSE MEDIATED MRNA DECAY
9 19566 PROFILIN//PROFILIN 1//POLY L PROLINE
10 8466 POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE

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