Class information for:
Level 1: DEGRADOMICS//LIFE SCI 4 401//N TERMINOMICS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
23215 354 46.5 88%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
157 3       JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//BIOCHEMICAL RESEARCH METHODS//INTERNATIONAL JOURNAL OF MASS SPECTROMETRY 61558
370 2             PROTEOMICS//JOURNAL OF PROTEOME RESEARCH//BIOCHEMICAL RESEARCH METHODS 17272
23215 1                   DEGRADOMICS//LIFE SCI 4 401//N TERMINOMICS 354

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DEGRADOMICS authKW 745848 6% 41% 21
2 LIFE SCI 4 401 address 652315 3% 69% 11
3 N TERMINOMICS authKW 368024 2% 53% 8
4 TERMINOMICS authKW 345030 1% 100% 4
5 DIAGONAL CHROMATOGRAPHY authKW 345026 2% 67% 6
6 ORAL BIOL MED SCI address 260608 10% 8% 37
7 COFRADIC authKW 240913 3% 31% 9
8 N TERMINAL SEQUENCE ANALYSIS authKW 230017 1% 67% 4
9 POSITIONAL PROTEOMICS authKW 197156 1% 57% 4
10 BR SIGNATURE authKW 172515 1% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 6231 44% 0% 156
2 Biochemistry & Molecular Biology 1160 48% 0% 170
3 Chemistry, Analytical 337 14% 0% 51
4 Mathematical & Computational Biology 272 5% 0% 19
5 Biotechnology & Applied Microbiology 99 8% 0% 30
6 Chemistry, Medicinal 34 4% 0% 13
7 Biophysics 31 5% 0% 16
8 Spectroscopy 28 3% 0% 11
9 Cell Biology 16 6% 0% 20
10 Genetics & Heredity 5 3% 0% 11

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LIFE SCI 4 401 652315 3% 69% 11
2 ORAL BIOL MED SCI 260608 10% 8% 37
3 AG SYSTEMAT PROTEOMFOR BIOANALYT 115009 1% 67% 2
4 MED PROT 96050 7% 4% 25
5 AG SYSTEMAT PROTEOME BIOANALYT 86257 0% 100% 1
6 BIOCATALYST CHARACTERIZAT DESIGN 86257 0% 100% 1
7 BIOCHEM ORAL BIOL MED SCI 86257 0% 100% 1
8 COMPETENCE SYST PHYSIOL METABOL DIS 86257 0% 100% 1
9 COMPUTAT BIOL MOL BIOPHYS PROGRAM 86257 0% 100% 1
10 CORP BIOL 86257 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR & CELLULAR PROTEOMICS 17482 7% 1% 25
2 PROTEOMICS 15432 9% 1% 32
3 BIOLOGICAL CHEMISTRY 6054 4% 0% 15
4 JOURNAL OF PROTEOME RESEARCH 4070 5% 0% 17
5 NATURE METHODS 2487 2% 0% 7
6 CURRENT OPINION IN CHEMICAL BIOLOGY 2238 2% 0% 7
7 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 1187 1% 0% 3
8 EXPERT REVIEW OF PROTEOMICS 1055 1% 0% 3
9 NATURE PROTOCOLS 945 1% 0% 5
10 NATURE BIOTECHNOLOGY 815 1% 0% 5

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DEGRADOMICS 745848 6% 41% 21 Search DEGRADOMICS Search DEGRADOMICS
2 N TERMINOMICS 368024 2% 53% 8 Search N+TERMINOMICS Search N+TERMINOMICS
3 TERMINOMICS 345030 1% 100% 4 Search TERMINOMICS Search TERMINOMICS
4 DIAGONAL CHROMATOGRAPHY 345026 2% 67% 6 Search DIAGONAL+CHROMATOGRAPHY Search DIAGONAL+CHROMATOGRAPHY
5 COFRADIC 240913 3% 31% 9 Search COFRADIC Search COFRADIC
6 N TERMINAL SEQUENCE ANALYSIS 230017 1% 67% 4 Search N+TERMINAL+SEQUENCE+ANALYSIS Search N+TERMINAL+SEQUENCE+ANALYSIS
7 POSITIONAL PROTEOMICS 197156 1% 57% 4 Search POSITIONAL+PROTEOMICS Search POSITIONAL+PROTEOMICS
8 BR SIGNATURE 172515 1% 100% 2 Search BR+SIGNATURE Search BR+SIGNATURE
9 C TERMINOMICS 172515 1% 100% 2 Search C+TERMINOMICS Search C+TERMINOMICS
10 N TERMINAL PEPTIDES 172511 1% 50% 4 Search N+TERMINAL+PEPTIDES Search N+TERMINAL+PEPTIDES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 VIZOVISEK, M , VIDMAR, R , FONOVIC, M , TURK, B , (2016) CURRENT TRENDS AND CHALLENGES IN PROTEOMIC IDENTIFICATION OF PROTEASE SUBSTRATES.BIOCHIMIE. VOL. 122. ISSUE . P. 77 -87 57 57% 3
2 ROGERS, LD , OVERALL, CM , (2013) PROTEOLYTIC POST-TRANSLATIONAL MODIFICATION OF PROTEINS: PROTEOMIC TOOLS AND METHODOLOGY.MOLECULAR & CELLULAR PROTEOMICS. VOL. 12. ISSUE 12. P. 3532 -3542 53 62% 24
3 SHAHINIAN, H , THOLEN, S , SCHILLING, O , (2013) PROTEOMIC IDENTIFICATION OF PROTEASE CLEAVAGE SITES: CELL-BIOLOGICAL AND BIOMEDICAL APPLICATIONS.EXPERT REVIEW OF PROTEOMICS. VOL. 10. ISSUE 5. P. 421 -433 58 48% 5
4 CHEN, LF , SHAN, YC , WENG, YJ , SUI, ZG , ZHANG, XD , LIANG, Z , ZHANG, LH , ZHANG, YK , (2016) HYDROPHOBIC TAGGING-ASSISTED N-TERMINI ENRICHMENT FOR IN-DEPTH N-TERMINOME ANALYSIS.ANALYTICAL CHEMISTRY. VOL. 88. ISSUE 17. P. 8390 -8395 31 78% 0
5 HUESGEN, PF , OVERALL, CM , (2012) N- AND C-TERMINAL DEGRADOMICS: NEW APPROACHES TO REVEAL BIOLOGICAL ROLES FOR PLANT PROTEASES FROM SUBSTRATE IDENTIFICATION.PHYSIOLOGIA PLANTARUM. VOL. 145. ISSUE 1. P. 5-17 28 76% 14
6 MARINO, G , ECICHARD, U , OVERALL, CM , (2015) PROTEIN TERMINI AND THEIR MODIFICATIONS REVEALED BY POSITIONAL PROTEOMICS.ACS CHEMICAL BIOLOGY. VOL. 10. ISSUE 8. P. 1754 -1764 39 43% 7
7 LANGE, PF , HUESGEN, PF , OVERALL, CM , (2012) TOPFIND 2.0-LINKING PROTEIN TERMINI WITH PROTEOLYTIC PROCESSING AND MODIFICATIONS ALTERING PROTEIN FUNCTION.NUCLEIC ACIDS RESEARCH. VOL. 40. ISSUE D1. P. D351 -D361 25 76% 13
8 CHEN, LF , SHAN, YC , WENG, YJ , YUAN, HM , ZHANG, S , FAN, RL , SUI, ZG , ZHANG, XD , ZHANG, LH , ZHANG, YK , (2016) DEPLETION OF INTERNAL PEPTIDES BY SITE-SELECTIVE BLOCKING, PHOSPHATE LABELING, AND TIO2 ADSORPTION FOR IN-DEPTH ANALYSIS OF C-TERMINOME.ANALYTICAL AND BIOANALYTICAL CHEMISTRY. VOL. 408. ISSUE 14. P. 3867 -3874 24 73% 0
9 KLINGLER, D , HARDT, M , (2012) PROFILING PROTEASE ACTIVITIES BY DYNAMIC PROTEOMICS WORKFLOWS.PROTEOMICS. VOL. 12. ISSUE 4-5. P. 587 -596 37 46% 11
10 VAN DEN BERG, BHJ , THOLEY, A , (2012) MASS SPECTROMETRY-BASED PROTEOMICS STRATEGIES FOR PROTEASE CLEAVAGE SITE IDENTIFICATION.PROTEOMICS. VOL. 12. ISSUE 4-5. P. 516 -529 39 44% 11

Classes with closest relation at Level 1


Rank Class id link
1 19394 N TERMINAL ACETYLTRANSFERASE//ARD1//N TERMINAL ACETYLATION
2 29940 CHARGE CHANGING SUBSTRATE//IN GEL PROTEASE ACTIVITY ASSAY//SUBSTRATE SPECIFIC ZYMOGRAPHY
3 8239 QUANTITATIVE PROTEOMICS//STABLE ISOTOPE LABELING//ISOBARIC TAG
4 1508 PEPTIDE IDENTIFICATION//JOURNAL OF PROTEOME RESEARCH//PROTEIN IDENTIFICATION
5 13434 CHEMICAL PROTEOMICS//ACTIVITY BASED PROTEIN PROFILING//ACTIVITY BASED PROBES
6 1845 APAF 1//CASPASE 2//CASPASE
7 6635 TACE INHIBITORS//MMP INHIBITORS//MATRIX METALLOPROTEINASE INHIBITOR
8 9024 MT1 MMP//CANC CELL//MEMBRANE TYPE 1 MATRIX METALLOPROTEINASE
9 10709 PEPTIDE FRAGMENTATION//PROTONATED PEPTIDES//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
10 8962 TWO DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS//MYOCARDIAL PROTEINS//ELECTROPHORESIS

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