Class information for:
Level 1: NATURAL ANTISENSE TRANSCRIPT//WRAP53//OVERLAPPING GENES

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
19074 523 41.9 88%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
126 2             MOLECULAR BIOLOGY AND EVOLUTION//BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY 23963
19074 1                   NATURAL ANTISENSE TRANSCRIPT//WRAP53//OVERLAPPING GENES 523

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NATURAL ANTISENSE TRANSCRIPT authKW 451680 4% 37% 21
2 WRAP53 authKW 449102 2% 77% 10
3 OVERLAPPING GENES authKW 328895 4% 28% 20
4 CUSTOM BIOTECHNOL SERV GRP address 233536 1% 100% 4
5 ENDOGENOUS ANTISENSE RNA authKW 175152 1% 100% 3
6 GENOME IL address 168275 1% 41% 7
7 TILING ARRAY authKW 164428 2% 22% 13
8 HYBRID RNA authKW 131362 1% 75% 3
9 NUDT6 authKW 131362 1% 75% 3
10 TECHNOL DEV TEAM MAMMALIAN CELLULAR DYNAM address 127800 2% 24% 9

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Genetics & Heredity 4384 38% 0% 200
2 Mathematical & Computational Biology 4019 16% 0% 85
3 Biotechnology & Applied Microbiology 3191 33% 0% 175
4 Biochemical Research Methods 1093 16% 0% 83
5 Biochemistry & Molecular Biology 1076 39% 0% 205
6 Cell Biology 310 14% 0% 74
7 Evolutionary Biology 213 5% 0% 24
8 Statistics & Probability 85 4% 0% 19
9 Biology 72 4% 0% 21
10 Virology 35 2% 0% 13

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CUSTOM BIOTECHNOL SERV GRP 233536 1% 100% 4
2 GENOME IL 168275 1% 41% 7
3 TECHNOL DEV TEAM MAMMALIAN CELLULAR DYNAM 127800 2% 24% 9
4 LEHRSTUHL DATENANAL VISUALISIERUNG 116768 0% 100% 2
5 ARABIDOPSIS THALIANA GENOME 58384 0% 100% 1
6 AUSTRALIA AUSTRALIAN CANC STUDV 58384 0% 100% 1
7 BIOINFORMAT PEKING YALE JOINT PLANT 58384 0% 100% 1
8 COMPART GENOM BIOINFORMAT 58384 0% 100% 1
9 CURIEUMR3244 58384 0% 100% 1
10 DEV BIOLDEV VASC BIOL PROGRAM 58384 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOTECHFORUM ( BTF ) 8125 4% 1% 19
2 BIOINFORMATICS 7070 7% 0% 36
3 GENOME BIOLOGY 4989 3% 1% 16
4 BMC BIOINFORMATICS 4086 4% 0% 23
5 BMC GENOMICS 3784 5% 0% 25
6 TRENDS IN GENETICS 2133 2% 0% 10
7 STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY 1842 1% 1% 4
8 BIOLOGY DIRECT 1678 1% 1% 4
9 BMC MOLECULAR BIOLOGY 1226 1% 1% 4
10 NUCLEIC ACIDS RESEARCH 1121 5% 0% 28

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 NATURAL ANTISENSE TRANSCRIPT 451680 4% 37% 21 Search NATURAL+ANTISENSE+TRANSCRIPT Search NATURAL+ANTISENSE+TRANSCRIPT
2 WRAP53 449102 2% 77% 10 Search WRAP53 Search WRAP53
3 OVERLAPPING GENES 328895 4% 28% 20 Search OVERLAPPING+GENES Search OVERLAPPING+GENES
4 ENDOGENOUS ANTISENSE RNA 175152 1% 100% 3 Search ENDOGENOUS+ANTISENSE+RNA Search ENDOGENOUS+ANTISENSE+RNA
5 TILING ARRAY 164428 2% 22% 13 Search TILING+ARRAY Search TILING+ARRAY
6 HYBRID RNA 131362 1% 75% 3 Search HYBRID+RNA Search HYBRID+RNA
7 NUDT6 131362 1% 75% 3 Search NUDT6 Search NUDT6
8 AFFYMETRIX TILING ARRAYS 116768 0% 100% 2 Search AFFYMETRIX+TILING+ARRAYS Search AFFYMETRIX+TILING+ARRAYS
9 ANTISENSE TRANSCRIPTOME 116768 0% 100% 2 Search ANTISENSE+TRANSCRIPTOME Search ANTISENSE+TRANSCRIPTOME
10 LONG NATURALLY OCCURRING ANTISENSE TRANSCRIPTS NATS 116768 0% 100% 2 Search LONG+NATURALLY+OCCURRING+ANTISENSE+TRANSCRIPTS+NATS Search LONG+NATURALLY+OCCURRING+ANTISENSE+TRANSCRIPTS+NATS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 ROSIKIEWICZ, W , MAKALOWSKA, I , (2016) BIOLOGICAL FUNCTIONS OF NATURAL ANTISENSE TRANSCRIPTS.ACTA BIOCHIMICA POLONICA. VOL. 63. ISSUE 4. P. 665 -673 45 39% 0
2 CHEREZOV, RO , SIMONOVA, OB , (2014) OVERLAPPING GENES AND ANTISENSE TRANSCRIPTION IN EUKARYOTES.RUSSIAN JOURNAL OF GENETICS. VOL. 50. ISSUE 7. P. 653 -666 46 39% 1
3 HO, MR , TSAI, KW , LIN, WC , (2012) A UNIFIED FRAMEWORK OF OVERLAPPING GENES: TOWARDS THE ORIGINATION AND ENDOGENIC REGULATION.GENOMICS. VOL. 100. ISSUE 4. P. 231 -239 28 54% 10
4 FONSECA, MM , HARRIS, DJ , POSADA, D , (2014) ORIGIN AND LENGTH DISTRIBUTION OF UNIDIRECTIONAL PROKARYOTIC OVERLAPPING GENES.G3-GENES GENOMES GENETICS. VOL. 4. ISSUE 1. P. 19-27 18 72% 5
5 BEITER, T , REICH, E , WILLIAMS, RW , SIMON, P , (2009) ANTISENSE TRANSCRIPTION: A CRITICAL LOOK IN BOTH DIRECTIONS.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 66. ISSUE 1. P. 94 -112 53 25% 61
6 BRITTO-KIDO, SD , NETO, JRCF , PANDOLFI, V , MARCELINO-GUIMARAES, FC , NEPOMUCENO, AL , ABDELNOOR, RV , BENKO-ISEPPON, A , KIDO, EA , (2013) NATURAL ANTISENSE TRANSCRIPTS IN PLANTS: A REVIEW AND IDENTIFICATION IN SOYBEAN INFECTED WITH PHAKOPSORA PACHYRHIZI SUPERSAGE LIBRARY.SCIENTIFIC WORLD JOURNAL. VOL. . ISSUE . P. - 27 47% 1
7 ZHANG, YC , LIN, K , (2015) PHYLOGENY INFERENCE OF CLOSELY RELATED BACTERIAL GENOMES: COMBINING THE FEATURES OF BOTH OVERLAPPING GENES AND COLLINEAR GENOMIC REGIONS.EVOLUTIONARY BIOINFORMATICS. VOL. 11. ISSUE . P. 1 -9 22 48% 0
8 NUMATA, K , KIYOSAWA, H , (2012) GENOME-WIDE IMPACT OF ENDOGENOUS ANTISENSE TRANSCRIPTS IN EUKARYOTES.FRONTIERS IN BIOSCIENCE-LANDMARK. VOL. 17. ISSUE . P. 300-315 37 29% 4
9 SOLDA, G , SUYAMA, M , PELUCCHI, P , BOI, S , GUFFANTI, A , RIZZI, E , BORK, P , TENCHINI, ML , CICCARELLI, FD , (2008) NON-RANDOM RETENTION OF PROTEIN-CODING OVERLAPPING GENES IN METAZOA.BMC GENOMICS. VOL. 9. ISSUE . P. - 24 49% 13
10 MAKALOWSKA, I , LIN, CF , MAKALOWSKI, W , (2005) OVERLAPPING GENES IN VERTEBRATE GENOMES.COMPUTATIONAL BIOLOGY AND CHEMISTRY. VOL. 29. ISSUE 1. P. 1-12 32 36% 54

Classes with closest relation at Level 1


Rank Class id link
1 26208 RNA ACTIVATION//SMALL ACTIVATING RNA//SARNA
2 28425 PROCESSED PSEUDOGENES//CYP4Z2P//DUPLICATED PSEUDOGENES
3 29317 AOGEN//BRADYTROPHIC PHENOCOPY//CONTROL OF TRANSGENE EXPRESSION
4 22783 BIDIRECTIONAL PROMOTER//OPERON PREDICTION//INTERGENIC DISTANCE
5 357 LONG NONCODING RNAS//LNCRNA//LONG NONCODING RNA
6 16034 SERIAL ANALYSIS OF GENE EXPRESSION//SAGE//GLGI
7 11342 GENE PREDICTION//GENE FINDING//GENE RECOGNITION
8 17891 RRP6//MRNP BIOGENESIS METAB//DIS3
9 4702 CHIP SEQ//ENHANCER//PEAK CALLING
10 11597 RNA EDITING//ADAR//ADAR1

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