Class information for:
Level 1: BIOMAG BANK//PROT DATA BANK EUROPE//CHEMICAL SHIFT

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
19037 525 43.5 81%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
5 4 CHEMISTRY, ORGANIC//CHEMISTRY, INORGANIC & NUCLEAR//CHEMISTRY, MULTIDISCIPLINARY 1745167
189 3       JOURNAL OF MAGNETIC RESONANCE//MAGNETIC RESONANCE IN MEDICINE//JOURNAL OF BIOMOLECULAR NMR 54843
866 2             JOURNAL OF BIOMOLECULAR NMR//JOURNAL OF MAGNETIC RESONANCE//RESIDUAL DIPOLAR COUPLINGS 11581
19037 1                   BIOMAG BANK//PROT DATA BANK EUROPE//CHEMICAL SHIFT 525

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOMAG BANK address 759975 3% 93% 14
2 PROT DATA BANK EUROPE address 518156 3% 64% 14
3 CHEMICAL SHIFT authKW 371311 16% 7% 86
4 JOURNAL OF BIOMOLECULAR NMR journal 369692 25% 5% 130
5 PDBJ address 348969 1% 100% 6
6 BMRB authKW 316654 1% 78% 7
7 RCSB PROT DATA BANK address 232638 2% 50% 8
8 PROTON CHEMICAL SHIFT authKW 219218 1% 54% 7
9 PROTEIN STRUCTURE VALIDATION authKW 209377 1% 60% 6
10 NOE ASSIGNMENT authKW 181751 1% 63% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Spectroscopy 6775 31% 0% 164
2 Biochemistry & Molecular Biology 2690 59% 0% 308
3 Biophysics 861 15% 0% 81
4 Physics, Atomic, Molecular & Chemical 333 11% 0% 58
5 Biochemical Research Methods 312 9% 0% 47
6 Chemistry, Multidisciplinary 235 16% 0% 85
7 Mathematical & Computational Biology 118 3% 0% 16
8 Chemistry, Physical 86 12% 0% 61
9 Crystallography 19 2% 0% 12
10 Cell Biology 8 4% 0% 22

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOMAG BANK 759975 3% 93% 14
2 PROT DATA BANK EUROPE 518156 3% 64% 14
3 PDBJ 348969 1% 100% 6
4 RCSB PROT DATA BANK 232638 2% 50% 8
5 BIOMOL NMR MUNICH INTEGRATED PROT SCI 174484 1% 100% 3
6 PDBE 174484 1% 100% 3
7 PROT DATA BANK EUROPE PDBE 174484 1% 100% 3
8 RCSB PDB 161555 1% 56% 5
9 MATEMAT LICADA SAN LUIS 145379 3% 17% 15
10 INTEGRAT PROTE 124984 2% 18% 12

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BIOMOLECULAR NMR 369692 25% 5% 130
2 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 7637 6% 0% 29
3 PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 7628 2% 2% 8
4 JOURNAL OF MAGNETIC RESONANCE SERIES B 3466 1% 1% 6
5 JOURNAL OF COMPUTATIONAL CHEMISTRY 2116 3% 0% 15
6 PROTEIN SCIENCE 1547 2% 0% 13
7 JOURNAL OF MAGNETIC RESONANCE 1436 3% 0% 15
8 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 1340 9% 0% 47
9 ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY 1153 1% 0% 5
10 NUCLEIC ACIDS RESEARCH 959 5% 0% 26

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CHEMICAL SHIFT 371311 16% 7% 86 Search CHEMICAL+SHIFT Search CHEMICAL+SHIFT
2 BMRB 316654 1% 78% 7 Search BMRB Search BMRB
3 PROTON CHEMICAL SHIFT 219218 1% 54% 7 Search PROTON+CHEMICAL+SHIFT Search PROTON+CHEMICAL+SHIFT
4 PROTEIN STRUCTURE VALIDATION 209377 1% 60% 6 Search PROTEIN+STRUCTURE+VALIDATION Search PROTEIN+STRUCTURE+VALIDATION
5 NOE ASSIGNMENT 181751 1% 63% 5 Search NOE+ASSIGNMENT Search NOE+ASSIGNMENT
6 PROTEIN CHEMICAL SHIFT 174484 1% 100% 3 Search PROTEIN+CHEMICAL+SHIFT Search PROTEIN+CHEMICAL+SHIFT
7 STRUCTURE VALIDATION 167487 2% 24% 12 Search STRUCTURE+VALIDATION Search STRUCTURE+VALIDATION
8 CS ROSETTA 161056 1% 46% 6 Search CS+ROSETTA Search CS+ROSETTA
9 CHEMICAL SHIFT PREDICTION 153042 2% 26% 10 Search CHEMICAL+SHIFT+PREDICTION Search CHEMICAL+SHIFT+PREDICTION
10 BIOMAGRESBANK BMRB 116323 0% 100% 2 Search BIOMAGRESBANK+BMRB Search BIOMAGRESBANK+BMRB

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 WISHART, DS , (2011) INTERPRETING PROTEIN CHEMICAL SHIFT DATA.PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY. VOL. 58. ISSUE 1-2. P. 62 -87 105 55% 69
2 HAN, B , LIU, YF , GINZINGER, SW , WISHART, DS , (2011) SHIFTX2: SIGNIFICANTLY IMPROVED PROTEIN CHEMICAL SHIFT PREDICTION.JOURNAL OF BIOMOLECULAR NMR. VOL. 50. ISSUE 1. P. 43 -57 33 77% 168
3 VUISTER, GW , FOGH, RH , HENDRICKX, PMS , DORELEIJERS, JF , GUTMANAS, A , (2014) AN OVERVIEW OF TOOLS FOR THE VALIDATION OF PROTEIN NMR STRUCTURES.JOURNAL OF BIOMOLECULAR NMR. VOL. 58. ISSUE 4. P. 259-285 59 53% 5
4 SHEN, Y , BAX, A , (2013) PROTEIN BACKBONE AND SIDECHAIN TORSION ANGLES PREDICTED FROM NMR CHEMICAL SHIFTS USING ARTIFICIAL NEURAL NETWORKS.JOURNAL OF BIOMOLECULAR NMR. VOL. 56. ISSUE 3. P. 227-241 30 63% 136
5 ZHU, T , ZHANG, JZH , HE, X , (2014) CORRECTION OF ERRONEOUSLY PACKED PROTEIN'S SIDE CHAINS IN THE NMR STRUCTURE BASED ON AB INITIO CHEMICAL SHIFT CALCULATIONS.PHYSICAL CHEMISTRY CHEMICAL PHYSICS. VOL. 16. ISSUE 34. P. 18163 -18169 38 72% 1
6 VRANKEN, WF , (2014) NMR STRUCTURE VALIDATION IN RELATION TO DYNAMICS AND STRUCTURE DETERMINATION.PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY. VOL. 82. ISSUE . P. 27 -38 47 52% 1
7 LEHTIVARJO, J , TUPPURAINEN, K , HASSINEN, T , LAATIKAINEN, R , PERAKYLA, M , (2012) COMBINING NMR ENSEMBLES AND MOLECULAR DYNAMICS SIMULATIONS PROVIDES MORE REALISTIC MODELS OF PROTEIN STRUCTURES IN SOLUTION AND LEADS TO BETTER CHEMICAL SHIFT PREDICTION.JOURNAL OF BIOMOLECULAR NMR. VOL. 52. ISSUE 3. P. 257-267 26 87% 17
8 ROSATO, A , TEJERO, R , MONTELIONE, GT , (2013) QUALITY ASSESSMENT OF PROTEIN NMR STRUCTURES.CURRENT OPINION IN STRUCTURAL BIOLOGY. VOL. 23. ISSUE 5. P. 715-724 39 57% 5
9 LI, DW , BRUSCHWEILER, R , (2015) PPM_ONE: A STATIC PROTEIN STRUCTURE BASED CHEMICAL SHIFT PREDICTOR.JOURNAL OF BIOMOLECULAR NMR. VOL. 62. ISSUE 3. P. 403 -409 28 74% 2
10 SHEN, Y , BAX, A , (2007) PROTEIN BACKBONE CHEMICAL SHIFTS PREDICTED FROM SEARCHING A DATABASE FOR TORSION ANGLE AND SEQUENCE HOMOLOGY.JOURNAL OF BIOMOLECULAR NMR. VOL. 38. ISSUE 4. P. 289 -302 31 62% 172

Classes with closest relation at Level 1


Rank Class id link
1 2336 JOURNAL OF BIOMOLECULAR NMR//TROSY//MULTIDIMENSIONAL NMR
2 2138 RESIDUAL DIPOLAR COUPLINGS//JOURNAL OF BIOMOLECULAR NMR//PSEUDOCONTACT SHIFTS
3 4862 INTERMOLECULAR EFFECTS//NUCLEAR MAGNETIC SHIELDING//GIAO
4 7907 DISTANCE GEOMETRY//JOURNAL OF MAGNETIC RESONANCE SERIES B//DGGTATACC2
5 30495 H 1 CHEMICAL SHIFTS//17 KETOSTEROID GLUCURONIDES//1H CHEMICAL SHIFTS
6 13680 BETA HAIRPIN//TRP CAGE//SIDE CHAIN INTERACTIONS
7 7436 ALPHA HELIX//ALPHA HELIX STABILITY//N CAP
8 18145 RIBOSE AND NUCLEOBASE//ALTERNATE SITE SPECIFIC LABELING//DEUTERATED NUCLEOSIDES
9 1409 PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//THREADING
10 20494 INT MACROMOL SCI//POLYBETA PHENETHYL L ASPARTATE//POLYL ALANINE

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