Class information for:
Level 1: IMGT//UPR CNRS 1142//REPERTOIRE SEQUENCING

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
18474 550 40.3 87%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
10 3       IMMUNOLOGY//JOURNAL OF IMMUNOLOGY//IMMUNOL 134299
183 2             IMMUNOLOGY//JOURNAL OF IMMUNOLOGY//SOMATIC HYPERMUTATION 21863
18474 1                   IMGT//UPR CNRS 1142//REPERTOIRE SEQUENCING 550

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 IMGT authKW 1093247 6% 62% 32
2 UPR CNRS 1142 address 446775 2% 62% 13
3 REPERTOIRE SEQUENCING authKW 333106 1% 100% 6
4 CNRSUPR 1142 address 249827 1% 75% 6
5 COLLIERS DE PERLES authKW 222071 1% 100% 4
6 IMGT HIGHV QUEST authKW 222071 1% 100% 4
7 INT IMMUNOGENET INFORMAT SYST address 181689 1% 55% 6
8 IMMUNE REPERTOIRE authKW 173479 2% 31% 10
9 POISSON ABUNDANCE MODELS authKW 166553 1% 100% 3
10 LIGM address 162061 4% 15% 20

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Immunology 7376 55% 0% 303
2 Mathematical & Computational Biology 1076 8% 0% 46
3 Biochemical Research Methods 713 13% 0% 70
4 Genetics & Heredity 358 12% 0% 65
5 Biotechnology & Applied Microbiology 284 11% 0% 60
6 Biochemistry & Molecular Biology 138 17% 0% 95
7 Medicine, Research & Experimental 60 5% 0% 28
8 Hematology 41 3% 0% 19
9 Oncology 39 7% 0% 36
10 Cell Biology 38 6% 0% 35

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UPR CNRS 1142 446775 2% 62% 13
2 CNRSUPR 1142 249827 1% 75% 6
3 IMGT 205608 2% 37% 10
4 INT IMMUNOGENET INFORMAT SYST 181689 1% 55% 6
5 LIGM 162061 4% 15% 20
6 IMMUNOGENET MOL 161157 5% 10% 28
7 GENET HUMAINE IGH 148044 1% 67% 4
8 INTER PROGRAM COMPUTAT BIOL BIOINFORMAT 115736 3% 15% 14
9 HIGHER STAT INFORMAT ANAL 111035 0% 100% 2
10 IMMUNOGENET MOL IMGT 111035 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EXPERIMENTAL AND CLINICAL IMMUNOGENETICS 48769 4% 4% 20
2 FRONTIERS IN IMMUNOLOGY 12903 5% 1% 26
3 GENOME MEDICINE 6858 2% 1% 9
4 JOURNAL OF IMMUNOLOGY 2762 9% 0% 52
5 IMMUNOGENETICS 2088 2% 0% 13
6 ONCOIMMUNOLOGY 2081 1% 1% 6
7 BIOINFORMATICS 2056 4% 0% 20
8 BMC IMMUNOLOGY 2055 1% 1% 5
9 SCIENCE TRANSLATIONAL MEDICINE 1709 1% 0% 7
10 JOURNAL OF IMMUNOLOGICAL METHODS 1639 3% 0% 17

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 IMGT 1093247 6% 62% 32 Search IMGT Search IMGT
2 REPERTOIRE SEQUENCING 333106 1% 100% 6 Search REPERTOIRE+SEQUENCING Search REPERTOIRE+SEQUENCING
3 COLLIERS DE PERLES 222071 1% 100% 4 Search COLLIERS+DE+PERLES Search COLLIERS+DE+PERLES
4 IMGT HIGHV QUEST 222071 1% 100% 4 Search IMGT+HIGHV+QUEST Search IMGT+HIGHV+QUEST
5 IMMUNE REPERTOIRE 173479 2% 31% 10 Search IMMUNE+REPERTOIRE Search IMMUNE+REPERTOIRE
6 POISSON ABUNDANCE MODELS 166553 1% 100% 3 Search POISSON+ABUNDANCE+MODELS Search POISSON+ABUNDANCE+MODELS
7 ANTIBODYOME 148044 1% 67% 4 Search ANTIBODYOME Search ANTIBODYOME
8 ORPHONS 148044 1% 67% 4 Search ORPHONS Search ORPHONS
9 IGHJ 124913 1% 75% 3 Search IGHJ Search IGHJ
10 IMMUNE REPERTOIRE SEQUENCING 124913 1% 75% 3 Search IMMUNE+REPERTOIRE+SEQUENCING Search IMMUNE+REPERTOIRE+SEQUENCING

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 GREIFF, V , MIHO, E , MENZEL, U , REDDY, ST , (2015) BIOINFORMATIC AND STATISTICAL ANALYSIS OF ADAPTIVE IMMUNE REPERTOIRES.TRENDS IN IMMUNOLOGY. VOL. 36. ISSUE 11. P. 738 -749 57 59% 6
2 CALIS, JJA , ROSENBERG, BR , (2014) CHARACTERIZING IMMUNE REPERTOIRES BY HIGH THROUGHPUT SEQUENCING: STRATEGIES AND APPLICATIONS.TRENDS IN IMMUNOLOGY. VOL. 35. ISSUE 12. P. 581 -590 52 63% 18
3 YAARI, G , KLEINSTEIN, SH , (2015) PRACTICAL GUIDELINES FOR B-CELL RECEPTOR REPERTOIRE SEQUENCING ANALYSIS.GENOME MEDICINE. VOL. 7. ISSUE . P. - 48 51% 10
4 HOU, DN , CHEN, CC , SEELY, EJ , CHEN, SJ , SONG, YL , (2016) HIGH-THROUGHPUT SEQUENCING-BASED IMMUNE REPERTOIRE STUDY DURING INFECTIOUS DISEASE.FRONTIERS IN IMMUNOLOGY. VOL. 7. ISSUE . P. - 55 46% 1
5 HOEHN, KB , FOWLER, A , LUNTER, G , PYBUS, OG , (2016) THE DIVERSITY AND MOLECULAR EVOLUTION OF B-CELL RECEPTORS DURING INFECTION.MOLECULAR BIOLOGY AND EVOLUTION. VOL. 33. ISSUE 5. P. 1147 -1157 40 47% 4
6 SHUGAY, M , CHUDAKOV, DM , BRITANOVA, OV , IZRAELSON, M , PUTINTSEVA, EV , ZVYAGIN, IV , BAGAEV, DV , (2016) VDJVIZ: A VERSATILE BROWSER FOR IMMUNOGENOMICS DATA.BMC GENOMICS. VOL. 17. ISSUE . P. - 30 77% 0
7 LEE, DW , KHAVRUTSKII, IV , WALLQVIST, A , BAVARI, S , COOPER, CL , CHAUDHURY, S , (2017) BRILIA: INTEGRATED TOOL FOR HIGH-THROUGHPUT ANNOTATION AND LINEAGE TREE ASSEMBLY OF B-CELL REPERTOIRES.FRONTIERS IN IMMUNOLOGY. VOL. 7. ISSUE . P. - 42 48% 0
8 ROBINS, H , (2013) IMMUNOSEQUENCING: APPLICATIONS OF IMMUNE REPERTOIRE DEEP SEQUENCING.CURRENT OPINION IN IMMUNOLOGY. VOL. 25. ISSUE 5. P. 646-652 27 63% 47
9 GREIFF, V , BHAT, P , COOK, SC , MENZEL, U , KANG, WJ , REDDY, ST , (2015) A BIOINFORMATIC FRAMEWORK FOR IMMUNE REPERTOIRE DIVERSITY PROFILING ENABLES DETECTION OF IMMUNOLOGICAL STATUS.GENOME MEDICINE. VOL. 7. ISSUE . P. - 31 60% 6
10 BROCHET, X , LEFRANC, MP , GIUDICELLI, V , (2008) IMGT/V-QUEST: THE HIGHLY CUSTOMIZED AND INTEGRATED SYSTEM FOR IG AND TR STANDARDIZED V-J AND V-D-J SEQUENCE ANALYSIS.NUCLEIC ACIDS RESEARCH. VOL. 36. ISSUE . P. W503-W508 17 85% 343

Classes with closest relation at Level 1


Rank Class id link
1 13833 PROT CRYSTALLOG UNIT//T CELL RECEPTOR//PEPTIDE MHC
2 6059 V H GENE//IMMUNOGLOBULIN GENES//CROSS REACTIVE IDIOTYPE
3 6206 T CELL RECEPTOR//IMMUNOGENETICS//SYNOVIAL T CELLS
4 6667 VDJ RECOMBINATION//RAG2//RAG1
5 2284 INTERDISCIPLINARY PROGRAM IMMUNOL//CD8 T CELLS//JOURNAL OF IMMUNOLOGY
6 28653 IN SITU TETRAMER STAINING//CONDITIONAL LIGANDS//EX VIVO PHENOTYPING
7 9356 IMMUNOSENESCENCE//CD28//CD57
8 7148 SOMATIC HYPERMUTATION//ACTIVATION INDUCED CYTIDINE DEAMINASE//CLASS SWITCH RECOMBINATION
9 28940 NANOSYST BIOL CANC//SURPRISAL ANALYSIS//MICROENGRAVING
10 8251 CANONICAL STRUCTURES//ANTIBODY MODELING//HUMANIZATION

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