Class information for:
Level 1: VDJ RECOMBINATION//RAG2//RAG1

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
6667 1457 49.1 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
10 3       IMMUNOLOGY//JOURNAL OF IMMUNOLOGY//IMMUNOL 134299
183 2             IMMUNOLOGY//JOURNAL OF IMMUNOLOGY//SOMATIC HYPERMUTATION 21863
6667 1                   VDJ RECOMBINATION//RAG2//RAG1 1457

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 VDJ RECOMBINATION authKW 1456929 11% 45% 156
2 RAG2 authKW 258326 2% 41% 30
3 RAG1 authKW 242133 2% 33% 35
4 RECOMBINATION ACTIVATING GENE authKW 192510 1% 44% 21
5 RECOMBINATION SIGNAL SEQUENCE authKW 161195 1% 77% 10
6 GERMLINE TRANSCRIPTION authKW 148312 1% 37% 19
7 RAG authKW 90032 1% 23% 19
8 VDJ REARRANGEMENT authKW 86362 1% 32% 13
9 BIOCHEM MOL CELLULAR SCI address 83824 0% 100% 4
10 LOCUS CONTRACTION authKW 83824 0% 100% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Immunology 16357 51% 0% 737
2 Cell Biology 4375 29% 0% 421
3 Biochemistry & Molecular Biology 3572 42% 0% 616
4 Genetics & Heredity 417 8% 0% 122
5 Medicine, Research & Experimental 243 6% 0% 87
6 Developmental Biology 129 2% 0% 33
7 Biology 35 2% 0% 31
8 Biophysics 25 3% 0% 39
9 Hematology 22 2% 0% 30
10 Allergy -0 0% 0% 3

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEM MOL CELLULAR SCI 83824 0% 100% 4
2 IMMUNOL IMM22 67058 0% 80% 4
3 CHILDRENS HOSPIMMUNE DIS 47896 0% 57% 4
4 ABRAMSON FAMILY CANC PERELMAN MED 41912 0% 100% 2
5 CHILDHOOD CANC ABRAMSON FAMILY CANC I 41912 0% 100% 2
6 IMM22 41912 0% 100% 2
7 TRANSGENESIS LYMPHOCYTE BIOL 41912 0% 100% 2
8 URA 1960 IMMUNOL 41912 0% 100% 2
9 CHROMATIN GENE EXP S 41896 1% 20% 10
10 CANC PATHOBIOL 39602 1% 17% 11

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF IMMUNOLOGY 12177 12% 0% 177
2 IMMUNITY 11783 3% 1% 44
3 ADVANCES IN IMMUNOLOGY 11300 1% 3% 18
4 NATURE IMMUNOLOGY 10935 2% 2% 34
5 MOLECULAR AND CELLULAR BIOLOGY 9706 7% 0% 102
6 MOLECULAR IMMUNOLOGY 6518 3% 1% 47
7 JOURNAL OF EXPERIMENTAL MEDICINE 6294 4% 1% 61
8 SEMINARS IN IMMUNOLOGY 4629 1% 2% 14
9 EUROPEAN JOURNAL OF IMMUNOLOGY 4584 4% 0% 54
10 IMMUNOLOGICAL REVIEWS 4554 2% 1% 26

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 VDJ RECOMBINATION 1456929 11% 45% 156 Search VDJ+RECOMBINATION Search VDJ+RECOMBINATION
2 RAG2 258326 2% 41% 30 Search RAG2 Search RAG2
3 RAG1 242133 2% 33% 35 Search RAG1 Search RAG1
4 RECOMBINATION ACTIVATING GENE 192510 1% 44% 21 Search RECOMBINATION+ACTIVATING+GENE Search RECOMBINATION+ACTIVATING+GENE
5 RECOMBINATION SIGNAL SEQUENCE 161195 1% 77% 10 Search RECOMBINATION+SIGNAL+SEQUENCE Search RECOMBINATION+SIGNAL+SEQUENCE
6 GERMLINE TRANSCRIPTION 148312 1% 37% 19 Search GERMLINE+TRANSCRIPTION Search GERMLINE+TRANSCRIPTION
7 RAG 90032 1% 23% 19 Search RAG Search RAG
8 VDJ REARRANGEMENT 86362 1% 32% 13 Search VDJ+REARRANGEMENT Search VDJ+REARRANGEMENT
9 LOCUS CONTRACTION 83824 0% 100% 4 Search LOCUS+CONTRACTION Search LOCUS+CONTRACTION
10 SIGNAL JOINTS 83824 0% 100% 4 Search SIGNAL+JOINTS Search SIGNAL+JOINTS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 SCHATZ, DG , SWANSON, PC , (2011) V(D)J RECOMBINATION: MECHANISMS OF INITIATION.ANNUAL REVIEW OF GENETICS, VOL 45. VOL. 45. ISSUE . P. 167 -202 126 86% 107
2 TENG, G , SCHATZ, DG , (2015) REGULATION AND EVOLUTION OF THE RAG RECOMBINASE.MOLECULAR MECHANISMS THAT ORCHESTRATE THE ASSEMBLY OF ANTIGEN RECEPTOR LOCI. VOL. 128. ISSUE . P. 1 -39 133 73% 6
3 SCHATZ, DG , JI, YH , (2011) RECOMBINATION CENTRES AND THE ORCHESTRATION OF V(D)J RECOMBINATION.NATURE REVIEWS IMMUNOLOGY. VOL. 11. ISSUE 4. P. 251 -263 96 84% 146
4 OUTTERS, P , JAEGER, S , ZAAROUR, N , FERRIER, P , (2015) LONG-RANGE CONTROL OF V(D)J RECOMBINATION & ALLELIC EXCLUSION: MODELING VIEWS.MOLECULAR MECHANISMS THAT ORCHESTRATE THE ASSEMBLY OF ANTIGEN RECEPTOR LOCI. VOL. 128. ISSUE . P. 363 -413 156 65% 1
5 SWANSON, PC , (2004) THE BOUNTY OF RAGS: RECOMBINATION SIGNAL COMPLEXES AND REACTION OUTCOMES.IMMUNOLOGICAL REVIEWS. VOL. 200. ISSUE . P. 90 -114 103 82% 66
6 CARICO, Z , KRANGEL, MS , (2015) CHROMATIN DYNAMICS AND THE DEVELOPMENT OF THE TCR ALPHA AND TCR DELTA REPERTOIRES.MOLECULAR MECHANISMS THAT ORCHESTRATE THE ASSEMBLY OF ANTIGEN RECEPTOR LOCI. VOL. 128. ISSUE . P. 307 -361 118 56% 2
7 COBB, RM , OESTREICH, KJ , OSIPOVICH, OA , OLTZ, EM , (2006) ACCESSIBILITY CONTROL OF V(D)J RECOMBINATION.ADVANCES IN IMMUNOLOGY, VOL 91. VOL. 91. ISSUE . P. 45-109 146 51% 77
8 PROUDHON, C , HAO, BT , RAVIRAM, R , CHAUMEIL, J , SKOK, JA , (2015) LONG-RANGE REGULATION OF V(D)J RECOMBINATION.MOLECULAR MECHANISMS THAT ORCHESTRATE THE ASSEMBLY OF ANTIGEN RECEPTOR LOCI. VOL. 128. ISSUE . P. 123 -182 95 67% 3
9 GELLERT, M , (2002) V(D)J RECOMBINATION: RAG PROTEINS, REPAIR FACTORS, AND REGULATION.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 71. ISSUE . P. 101-132 109 54% 461
10 JAEGER, S , FERNANDEZ, B , FERRIER, P , (2013) EPIGENETIC ASPECTS OF LYMPHOCYTE ANTIGEN RECEPTOR GENE REARRANGEMENT OR 'WHEN STOCHASTICITY COMPLETES RANDOMNESS'.IMMUNOLOGY. VOL. 139. ISSUE 2. P. 141 -150 85 76% 3

Classes with closest relation at Level 1


Rank Class id link
1 5381 RECEPTOR EDITING//SURROGATE LIGHT CHAIN//PRE B CELL RECEPTOR
2 3254 DNA PK//NON HOMOLOGOUS END JOINING//DNA DEPENDENT PROTEIN KINASE
3 4314 T CELL DEVELOPMENT//THYMIC SELECTION//PRE T CELL RECEPTOR
4 18474 IMGT//UPR CNRS 1142//REPERTOIRE SEQUENCING
5 6004 RIBS//MOLECULAR IMMUNOLOGY//DEXTRAN B512
6 8176 POU DOMAIN//OCT 2//BRN3A
7 9379 PAX5//EBF//LINEAGE COMMITMENT
8 7148 SOMATIC HYPERMUTATION//ACTIVATION INDUCED CYTIDINE DEAMINASE//CLASS SWITCH RECOMBINATION
9 12297 SEVERE COMBINED IMMUNODEFICIENCY//OMENN SYNDROME//PRIMARY IMMUNODEFICIENCY
10 6206 T CELL RECEPTOR//IMMUNOGENETICS//SYNOVIAL T CELLS

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