Class information for:
Level 2: INTEGRASE//VPR//APOBEC3G

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
1825 6199 49.9 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
29 3       HIV//VIROLOGY//HIV 1 108954
1825 2             INTEGRASE//VPR//APOBEC3G 6199
2499 1                   INTEGRASE//HIV 1 INTEGRASE//LEDGF P75 2226
9090 1                   VIF//APOBEC3G//APOBEC3 1189
10010 1                   TRIM5 ALPHA//TRIM5//TRIMCYP 1099
12511 1                   VPR//SAMHD1//VPX 900
17542 1                   VPU//TETHERIN//BST 2 594
29171 1                   IFITM1//IFITM3//IFITM 191

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INTEGRASE authKW 678587 5% 49% 284
2 VPR authKW 596337 3% 75% 161
3 APOBEC3G authKW 595218 2% 89% 136
4 HIV 1 INTEGRASE authKW 579979 2% 79% 150
5 VIF authKW 560058 2% 83% 137
6 VPU authKW 394022 2% 78% 102
7 RESTRICTION FACTOR authKW 330080 2% 72% 93
8 TRIM5 ALPHA authKW 306984 1% 93% 67
9 APOBEC3 authKW 290668 1% 84% 70
10 SAMHD1 authKW 272860 1% 83% 67

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Virology 167713 39% 1% 2448
2 Biochemistry & Molecular Biology 7520 31% 0% 1945
3 Chemistry, Medicinal 2621 7% 0% 421
4 Cell Biology 2478 12% 0% 746
5 Parasitiology 1302 3% 0% 192
6 Immunology 1119 8% 0% 511
7 Microbiology 1025 7% 0% 421
8 Infectious Diseases 1009 5% 0% 283
9 Biophysics 806 5% 0% 324
10 Genetics & Heredity 509 5% 0% 324

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 VIRAL BIOCHEM SECT 154655 1% 90% 35
2 MOL VIROL GENE THER Y 125421 1% 44% 58
3 MOL RETROVIROL UNIT 74866 0% 72% 21
4 CANC IMMUNOL AIDS 71380 2% 12% 119
5 VIROL AIDS 70157 0% 49% 29
6 HIV DRUG ISTANCE PROGRAM 55465 1% 14% 81
7 MOL HUMAN RETROVIROL 54796 0% 70% 16
8 RETROVIROL HUMAINE 48944 0% 76% 13
9 LBPA 44128 1% 21% 43
10 MOL VIROL 41171 3% 5% 180

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RETROVIROLOGY 138387 3% 15% 185
2 JOURNAL OF VIROLOGY 112443 15% 2% 952
3 VIROLOGY 26950 5% 2% 321
4 PLOS PATHOGENS 18140 2% 3% 143
5 CURRENT HIV RESEARCH 9059 1% 5% 39
6 CELL HOST & MICROBE 8825 1% 4% 44
7 VIRUSES-BASEL 5749 1% 3% 44
8 AIDS RESEARCH AND HUMAN RETROVIRUSES 5053 1% 1% 75
9 JOURNAL OF BIOLOGICAL CHEMISTRY 2992 5% 0% 327
10 MICROBES AND INFECTION 2099 1% 1% 36

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 INTEGRASE 678587 5% 49% 284 Search INTEGRASE Search INTEGRASE
2 VPR 596337 3% 75% 161 Search VPR Search VPR
3 APOBEC3G 595218 2% 89% 136 Search APOBEC3G Search APOBEC3G
4 HIV 1 INTEGRASE 579979 2% 79% 150 Search HIV+1+INTEGRASE Search HIV+1+INTEGRASE
5 VIF 560058 2% 83% 137 Search VIF Search VIF
6 VPU 394022 2% 78% 102 Search VPU Search VPU
7 RESTRICTION FACTOR 330080 2% 72% 93 Search RESTRICTION+FACTOR Search RESTRICTION+FACTOR
8 TRIM5 ALPHA 306984 1% 93% 67 Search TRIM5+ALPHA Search TRIM5+ALPHA
9 APOBEC3 290668 1% 84% 70 Search APOBEC3 Search APOBEC3
10 SAMHD1 272860 1% 83% 67 Search SAMHD1 Search SAMHD1

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 DESIMMIE, BA , DELVIKS-FRANKENBERRRY, KA , BURDICK, RC , QI, DF , IZUMI, T , PATHAK, VK , (2014) MULTIPLE APOBEC3 RESTRICTION FACTORS FOR HIV-1 AND ONE VIF TO RULE THEM ALL.JOURNAL OF MOLECULAR BIOLOGY. VOL. 426. ISSUE 6. P. 1220 -1245 223 84% 58
2 LESBATS, P , ENGELMAN, AN , CHEREPANOV, P , (2016) RETROVIRAL DNA INTEGRATION.CHEMICAL REVIEWS. VOL. 116. ISSUE 20. P. 12730 -12757 255 68% 6
3 FENG, YQ , BAIG, TT , LOVE, RP , CHELICO, L , (2014) SUPPRESSION OF APOBEC3-MEDIATED RESTRICTION OF HIV-1 BY VIF.FRONTIERS IN MICROBIOLOGY. VOL. 5. ISSUE . P. - 222 93% 24
4 ZHENG, YH , JEANG, KT , TOKUNAGA, K , (2012) HOST RESTRICTION FACTORS IN RETROVIRAL INFECTION: PROMISES IN VIRUS-HOST INTERACTION.RETROVIROLOGY. VOL. 9. ISSUE . P. - 298 75% 30
5 HARRIS, RS , DUDLEY, JP , (2015) APOBECS AND VIRUS RESTRICTION.VIROLOGY. VOL. 479. ISSUE . P. 131 -145 178 77% 25
6 GOILA-GAUR, R , STREBEL, K , (2008) HIV-I VIF, APOBEC, AND INTRINSIC IMMUNITY.RETROVIROLOGY. VOL. 5. ISSUE . P. - 164 90% 176
7 WISSING, S , GALLOWAY, NLK , GREENE, WC , (2010) HIV-1 VIF VERSUS THE APOBEC3 CYTIDINE DEAMINASES: AN INTRACELLULAR DUEL BETWEEN PATHOGEN AND HOST RESTRICTION FACTORS.MOLECULAR ASPECTS OF MEDICINE. VOL. 31. ISSUE 5. P. 383 -397 177 96% 41
8 HENRIET, S , MERCENNE, G , BERNACCHI, S , PAILLART, JC , MARQUET, R , (2009) TUMULTUOUS RELATIONSHIP BETWEEN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 VIRAL INFECTIVITY FACTOR (VIF) AND THE HUMAN APOBEC-3G AND APOBEC-3F RESTRICTION FACTORS.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 73. ISSUE 2. P. 211 -232 209 80% 39
9 SIMON, V , BLOCH, N , LANDAU, NR , (2015) INTRINSIC HOST RESTRICTIONS TO HIV-1 AND MECHANISMS OF VIRAL ESCAPE.NATURE IMMUNOLOGY. VOL. 16. ISSUE 6. P. 546 -553 109 96% 33
10 ALBIN, JS , HARRIS, RS , (2010) INTERACTIONS OF HOST APOBEC3 RESTRICTION FACTORS WITH HIV-1 IN VIVO: IMPLICATIONS FOR THERAPEUTICS.EXPERT REVIEWS IN MOLECULAR MEDICINE. VOL. 12. ISSUE . P. - 148 93% 82

Classes with closest relation at Level 2


Rank Class id link
1 2356 NNRTIS//REVERSE TRANSCRIPTASE//HIV DRUG ISTANCE PROGRAM
2 10 AIDS RESEARCH AND HUMAN RETROVIRUSES//VIROLOGY//HIV 1
3 636 ENDOGENOUS RETROVIRUS//RETROVIRUS//RETROVIRAL VECTOR
4 773 EFAVIRENZ//NEVIRAPINE//RALTEGRAVIR
5 3063 DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE
6 4187 MACC1//HEPATOMA DERIVED GROWTH FACTOR//METASTASIS ASSOCIATED IN COLON CANCER 1
7 2553 BOVINE LEUKEMIA VIRUS//CAPRINE ARTHRITIS ENCEPHALITIS VIRUS//SMALL RUMINANT LENTIVIRUS
8 2636 COILED COIL//KRAB DOMAIN//PROTEIN DESIGN
9 3423 RNA EDITING//ADAR//AEG 1
10 1843 ACUTE PROMYELOCYTIC LEUKEMIA//ARSENIC TRIOXIDE//SUMO

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