Class information for:
Level 1: TARGETED PROTEOMICS//SELECTED REACTION MONITORING//MULTIPLE REACTION MONITORING

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
9567 1143 42.6 88%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
157 3       JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//BIOCHEMICAL RESEARCH METHODS//INTERNATIONAL JOURNAL OF MASS SPECTROMETRY 61558
370 2             PROTEOMICS//JOURNAL OF PROTEOME RESEARCH//BIOCHEMICAL RESEARCH METHODS 17272
9567 1                   TARGETED PROTEOMICS//SELECTED REACTION MONITORING//MULTIPLE REACTION MONITORING 1143

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TARGETED PROTEOMICS authKW 1163441 7% 52% 84
2 SELECTED REACTION MONITORING authKW 798214 7% 36% 82
3 MULTIPLE REACTION MONITORING authKW 427657 6% 23% 70
4 PARALLEL REACTION MONITORING authKW 332524 2% 66% 19
5 LUXEMBOURG CLIN PROTE LCP address 300969 1% 87% 13
6 BIOMARKER VERIFICATION authKW 295902 1% 92% 12
7 SISCAPA authKW 282157 1% 81% 13
8 MRM authKW 279688 4% 22% 48
9 QCONCAT authKW 218149 1% 58% 14
10 GENOME BRITISH COLUMBIA PROTE address 217377 2% 35% 23

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 45327 66% 0% 750
2 Chemistry, Analytical 7477 35% 0% 400
3 Medical Laboratory Technology 942 5% 0% 57
4 Spectroscopy 265 5% 0% 55
5 Biochemistry & Molecular Biology 221 16% 0% 181
6 Mathematical & Computational Biology 40 1% 0% 16
7 Biotechnology & Applied Microbiology 15 3% 0% 36
8 Pharmacology & Pharmacy 1 3% 0% 40
9 Medicine, Research & Experimental 0 1% 0% 17
10 Multidisciplinary Sciences 0 0% 0% 4

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LUXEMBOURG CLIN PROTE LCP 300969 1% 87% 13
2 GENOME BRITISH COLUMBIA PROTE 217377 2% 35% 23
3 LUXEMBOURG CLIN PROTE 157130 1% 59% 10
4 MOL SYST BIOL 156130 7% 8% 78
5 OFF CANC CLIN PROTE 94067 1% 39% 9
6 S3IT 66779 0% 50% 5
7 GENOME BC PROTE 55712 1% 19% 11
8 DOCTORAL SYST MOL BIOMED 53427 0% 100% 2
9 DRUG DESIGN DEV DDD 53427 0% 100% 2
10 LUXEMBOURG CLIN PROTE INITIAT 53427 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOANALYSIS 122582 7% 6% 80
2 JOURNAL OF PROTEOME RESEARCH 92170 13% 2% 145
3 MOLECULAR & CELLULAR PROTEOMICS 61134 7% 3% 84
4 EXPERT REVIEW OF PROTEOMICS 28557 2% 4% 28
5 PROTEOMICS CLINICAL APPLICATIONS 27844 3% 3% 31
6 PROTEOMICS 22826 6% 1% 70
7 JOURNAL OF PROTEOMICS 21402 4% 2% 46
8 CLINICAL PROTEOMICS 7274 1% 5% 6
9 ANALYTICAL CHEMISTRY 6080 8% 0% 91
10 NATURE METHODS 5086 2% 1% 18

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TARGETED PROTEOMICS 1163441 7% 52% 84 Search TARGETED+PROTEOMICS Search TARGETED+PROTEOMICS
2 SELECTED REACTION MONITORING 798214 7% 36% 82 Search SELECTED+REACTION+MONITORING Search SELECTED+REACTION+MONITORING
3 MULTIPLE REACTION MONITORING 427657 6% 23% 70 Search MULTIPLE+REACTION+MONITORING Search MULTIPLE+REACTION+MONITORING
4 PARALLEL REACTION MONITORING 332524 2% 66% 19 Search PARALLEL+REACTION+MONITORING Search PARALLEL+REACTION+MONITORING
5 BIOMARKER VERIFICATION 295902 1% 92% 12 Search BIOMARKER+VERIFICATION Search BIOMARKER+VERIFICATION
6 SISCAPA 282157 1% 81% 13 Search SISCAPA Search SISCAPA
7 MRM 279688 4% 22% 48 Search MRM Search MRM
8 QCONCAT 218149 1% 58% 14 Search QCONCAT Search QCONCAT
9 SRM 212889 4% 17% 48 Search SRM Search SRM
10 PSAQ 160281 1% 100% 6 Search PSAQ Search PSAQ

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 VAN DEN BROEK, I , NIESSEN, WMA , VAN DONGEN, WD , (2013) BIOANALYTICAL LC-MS/MS OF PROTEIN-BASED BIOPHARMACEUTICALS.JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES. VOL. 929. ISSUE . P. 161 -179 108 65% 60
2 PICOTTI, P , AEBERSOLD, R , (2012) SELECTED REACTION MONITORING-BASED PROTEOMICS: WORKFLOWS, POTENTIAL, PITFALLS AND FUTURE DIRECTIONS.NATURE METHODS. VOL. 9. ISSUE 6. P. 555 -566 63 64% 427
3 SABBAGH, B , MINDT, S , NEUMAIER, M , FINDEISEN, P , (2016) CLINICAL APPLICATIONS OF MS-BASED PROTEIN QUANTIFICATION.PROTEOMICS CLINICAL APPLICATIONS. VOL. 10. ISSUE 4. P. 323 -345 110 50% 3
4 SHI, TJ , SONG, EW , NIE, S , RODLAND, KD , LIU, T , QIAN, WJ , SMITH, RD , (2016) ADVANCES IN TARGETED PROTEOMICS AND APPLICATIONS TO BIOMEDICAL RESEARCH.PROTEOMICS. VOL. 16. ISSUE 15-16. P. 2160 -2182 97 53% 4
5 EBHARDT, HA , ROOT, A , SANDER, C , AEBERSOLD, R , (2015) APPLICATIONS OF TARGETED PROTEOMICS IN SYSTEMS BIOLOGY AND TRANSLATIONAL MEDICINE.PROTEOMICS. VOL. 15. ISSUE 18. P. 3193 -3208 76 61% 21
6 PERCY, AJ , BYRNS, S , PENNINGTON, SR , HOLMES, DT , ANDERSON, NL , AGRESTE, TM , DUFFY, MA , (2016) CLINICAL TRANSLATION OF MS-BASED, QUANTITATIVE PLASMA PROTEOMICS: STATUS, CHALLENGES, REQUIREMENTS, AND POTENTIAL.EXPERT REVIEW OF PROTEOMICS. VOL. 13. ISSUE 7. P. 673 -684 70 69% 1
7 CARR, SA , ABBATIELLO, SE , ACKERMANN, BL , BORCHERS, C , DOMON, B , DEUTSCH, EW , GRANT, RP , HOOFNAGLE, AN , HUTTENHAIN, R , KOOMEN, JM , ET AL (2014) TARGETED PEPTIDE MEASUREMENTS IN BIOLOGY AND MEDICINE: BEST PRACTICES FOR MASS SPECTROMETRY- BASED ASSAY DEVELOPMENT USING A FIT- FOR- PURPOSE APPROACH.MOLECULAR & CELLULAR PROTEOMICS. VOL. 13. ISSUE 3. P. 907 -917 47 64% 91
8 PARKER, CE , BORCHERS, CH , (2014) MASS SPECTROMETRY BASED BIOMARKER DISCOVERY, VERIFICATION, AND VALIDATION - QUALITY ASSURANCE AND CONTROL OF PROTEIN BIOMARKER ASSAYS.MOLECULAR ONCOLOGY. VOL. 8. ISSUE 4. P. 840 -858 61 58% 28
9 ZHENG, JN , MEHL, J , ZHU, YX , XIN, BM , OLAH, T , (2014) APPLICATION AND CHALLENGES IN USING LC- MS ASSAYS FOR ABSOLUTE QUANTITATIVE ANA- LYSIS OF THERAPEUTIC PROTEINS IN DRUG DISCOVERY.BIOANALYSIS. VOL. 6. ISSUE 6. P. 859-879 59 63% 16
10 ABBATIELLO, SE , SCHILLING, B , MANI, DR , ZIMMERMAN, LJ , HALL, SC , MACLEAN, B , ALBERTOLLE, M , ALLEN, S , BURGESS, M , CUSACK, MP , ET AL (2015) LARGE-SCALE INTERLABORATORY STUDY TO DEVELOP, ANALYTICALLY VALIDATE AND APPLY HIGHLY MULTIPLEXED, QUANTITATIVE PEPTIDE ASSAYS TO MEASURE CANCER-RELEVANT PROTEINS IN PLASMA.MOLECULAR & CELLULAR PROTEOMICS. VOL. 14. ISSUE 9. P. 2357 -2374 35 78% 30

Classes with closest relation at Level 1


Rank Class id link
1 1508 PEPTIDE IDENTIFICATION//JOURNAL OF PROTEOME RESEARCH//PROTEIN IDENTIFICATION
2 8239 QUANTITATIVE PROTEOMICS//STABLE ISOTOPE LABELING//ISOBARIC TAG
3 18498 BIOANALYSIS//ANTI DRUG ANTIBODIES//LIGAND BINDING ASSAY
4 2078 SELDI//SELDI TOF MS//PROTEOMICS
5 14482 URINARY PROTEOMICS//URINARY PROTEOME//URINE PROTEOME
6 15699 IMMOBILIZED TRYPSIN//PROTEIN DIGESTION//IMMOBILIZED ENZYME REACTOR
7 30422 RIER RED INFLAMAC ENFERMEDADES REUMAT//CIBER BBN SALUD CARLOS 3//MCCARTHYS GRP
8 8403 ION SUPPRESSION//MATRIX EFFECT//BIOANALYT METAB PHARMACOKINET
9 25970 METHIONINE ENKEPHALINAMIDE//1 2 DIAMINO 1 2 DIPHENYLETHANE//2 INJECTORS
10 37113 PRIMARY HUMAN CELLS//DR 70//CELL TYPE SPECIFIC SIGNATURES

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