Class information for:
Level 1: SINGLE CELL RNA SEQ//SINGLE CELL RNA SEQUENCING//SINGLE CELL TRANSCRIPTOMICS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
19974 482 46.0 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
1101 2             BIOINFORMATICS//COPY NUMBER VARIATION//NEXT GENERATION SEQUENCING 9808
19974 1                   SINGLE CELL RNA SEQ//SINGLE CELL RNA SEQUENCING//SINGLE CELL TRANSCRIPTOMICS 482

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SINGLE CELL RNA SEQ authKW 348416 2% 50% 11
2 SINGLE CELL RNA SEQUENCING authKW 285074 1% 75% 6
3 SINGLE CELL TRANSCRIPTOMICS authKW 228056 1% 60% 6
4 SINGLE CELL BIOLOGY authKW 152034 1% 40% 6
5 SINGLE CELL GENE EXPRESSION PROFILING authKW 142537 1% 75% 3
6 SANGER EBI address 126701 0% 100% 2
7 UEA FLOW CYTOMETRY SERV address 126701 0% 100% 2
8 SINGLE CELL authKW 113219 7% 5% 33
9 SINGLE CELL GENOM address 105577 1% 33% 5
10 SINGLE CELL TRANSCRIPTOME authKW 95023 1% 50% 3

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 4738 33% 0% 160
2 Biotechnology & Applied Microbiology 3007 34% 0% 163
3 Mathematical & Computational Biology 1413 10% 0% 49
4 Genetics & Heredity 1355 23% 0% 110
5 Cell Biology 1063 25% 0% 121
6 Biochemistry & Molecular Biology 528 30% 0% 145
7 Multidisciplinary Sciences 139 3% 0% 15
8 Cell & Tissue Engineering 105 1% 0% 7
9 Developmental Biology 65 3% 0% 13
10 Chemistry, Analytical 27 5% 0% 23

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SANGER EBI 126701 0% 100% 2
2 UEA FLOW CYTOMETRY SERV 126701 0% 100% 2
3 SINGLE CELL GENOM 105577 1% 33% 5
4 BEIJING ADV INNOVAT GENOM ICG 84466 0% 67% 2
5 KLARMAN CELL OBSERV 84466 0% 67% 2
6 EBI SINGLE CELL GENOM 81447 1% 43% 3
7 BIO ABORAT BIO 5 63350 0% 100% 1
8 BIOL COMP INFORMAT SCI 63350 0% 100% 1
9 BIOSYSTE SCI ENGN 63350 0% 100% 1
10 CANC SIGNALING 1 63350 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NATURE METHODS 31468 6% 2% 29
2 GENOME BIOLOGY 15460 6% 1% 27
3 NATURE BIOTECHNOLOGY 7813 4% 1% 18
4 CELL SYSTEMS 5584 1% 3% 3
5 NATURE PROTOCOLS 4014 2% 1% 12
6 BIOINFORMATICS 2850 5% 0% 22
7 GENOME RESEARCH 2245 1% 1% 7
8 GIGASCIENCE 1732 0% 1% 2
9 PLOS COMPUTATIONAL BIOLOGY 1354 2% 0% 10
10 BMC MOLECULAR BIOLOGY 1331 1% 1% 4

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SINGLE CELL RNA SEQ 348416 2% 50% 11 Search SINGLE+CELL+RNA+SEQ Search SINGLE+CELL+RNA+SEQ
2 SINGLE CELL RNA SEQUENCING 285074 1% 75% 6 Search SINGLE+CELL+RNA+SEQUENCING Search SINGLE+CELL+RNA+SEQUENCING
3 SINGLE CELL TRANSCRIPTOMICS 228056 1% 60% 6 Search SINGLE+CELL+TRANSCRIPTOMICS Search SINGLE+CELL+TRANSCRIPTOMICS
4 SINGLE CELL BIOLOGY 152034 1% 40% 6 Search SINGLE+CELL+BIOLOGY Search SINGLE+CELL+BIOLOGY
5 SINGLE CELL GENE EXPRESSION PROFILING 142537 1% 75% 3 Search SINGLE+CELL+GENE+EXPRESSION+PROFILING Search SINGLE+CELL+GENE+EXPRESSION+PROFILING
6 SINGLE CELL 113219 7% 5% 33 Search SINGLE+CELL Search SINGLE+CELL
7 SINGLE CELL TRANSCRIPTOME 95023 1% 50% 3 Search SINGLE+CELL+TRANSCRIPTOME Search SINGLE+CELL+TRANSCRIPTOME
8 SINGLE CELL DIAGNOSTICS 84466 0% 67% 2 Search SINGLE+CELL+DIAGNOSTICS Search SINGLE+CELL+DIAGNOSTICS
9 SINGLE CELL TRANSCRIPTOME SEQUENCING 84466 0% 67% 2 Search SINGLE+CELL+TRANSCRIPTOME+SEQUENCING Search SINGLE+CELL+TRANSCRIPTOME+SEQUENCING
10 SINGLE CELL GENE EXPRESSION 67568 1% 27% 4 Search SINGLE+CELL+GENE+EXPRESSION Search SINGLE+CELL+GENE+EXPRESSION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BACHER, R , KENDZIORSKI, C , (2016) DESIGN AND COMPUTATIONAL ANALYSIS OF SINGLE-CELL RNA-SEQUENCING EXPERIMENTS.GENOME BIOLOGY. VOL. 17. ISSUE . P. - 58 69% 6
2 WEN, L , TANG, FC , (2016) SINGLE-CELL SEQUENCING IN STEM CELL BIOLOGY.GENOME BIOLOGY. VOL. 17. ISSUE . P. - 61 60% 6
3 KUMAR, P , TAN, YQ , CAHAN, P , (2017) UNDERSTANDING DEVELOPMENT AND STEM CELLS USING SINGLE CELL-BASED ANALYSES OF GENE EXPRESSION.DEVELOPMENT. VOL. 144. ISSUE 1. P. 17 -32 74 58% 0
4 WAGNER, A , REGEV, A , YOSEF, N , (2016) REVEALING THE VECTORS OF CELLULAR IDENTITY WITH SINGLE-CELL GENOMICS.NATURE BIOTECHNOLOGY. VOL. 34. ISSUE 11. P. 1145 -1160 91 44% 0
5 KOLODZIEJCZYK, AA , KIM, JK , SVENSSON, V , MARIONI, JC , TEICHMANN, SA , (2015) THE TECHNOLOGY AND BIOLOGY OF SINGLE-CELL RNA SEQUENCING.MOLECULAR CELL. VOL. 58. ISSUE 4. P. 610 -620 45 55% 42
6 TRAPNELL, C , (2015) DEFINING CELL TYPES AND STATES WITH SINGLE-CELL GENOMICS.GENOME RESEARCH. VOL. 25. ISSUE 10. P. 1491 -1498 35 52% 39
7 POULIN, JF , TASIC, B , HJERLING-LEFFLER, J , TRIMARCHI, JM , AWATRAMANI, R , (2016) DISENTANGLING NEURAL CELL DIVERSITY USING SINGLE-CELL TRANSCRIPTOMICS.NATURE NEUROSCIENCE. VOL. 19. ISSUE 9. P. 1131 -1141 55 40% 3
8 SAADATPOUR, A , LAI, SJ , GUO, GJ , YUAN, GC , (2015) SINGLE-CELL ANALYSIS IN CANCER GENOMICS.TRENDS IN GENETICS. VOL. 31. ISSUE 10. P. 576 -586 45 49% 9
9 GRUN, D , VAN OUDENAARDEN, A , (2015) DESIGN AND ANALYSIS OF SINGLE-CELL SEQUENCING EXPERIMENTS.CELL. VOL. 163. ISSUE 4. P. 799 -810 35 49% 26
10 ZURAUSKIENE, J , YAU, C , (2016) PCAREDUCE: HIERARCHICAL CLUSTERING OF SINGLE CELL TRANSCRIPTIONAL PROFILES.BMC BIOINFORMATICS. VOL. 17. ISSUE . P. - 23 88% 1

Classes with closest relation at Level 1


Rank Class id link
1 7400 RNA SEQ//TRANSCRIPTOME ASSEMBLY//RNA SEQUENCING
2 28940 NANOSYST BIOL CANC//SURPRISAL ANALYSIS//MICROENGRAVING
3 27287 DIGITAL PCR//DROPLET DIGITAL PCR//ACTIVITY BASED BIOMARKERS
4 15648 MASS CYTOMETRY//CYTOMETRY PART A//CYTOF
5 16413 WHOLE GENOME AMPLIFICATION//MULTIPLE DISPLACEMENT AMPLIFICATION//PHI29 DNA POLYMERASE
6 11368 RNA AMPLIFICATION//LASER CAPTURE MICRODISSECTION//LASER MICRODISSECTION
7 35793 RIBOTAG//S100A10//4SU
8 1585 CHEMICAL MASTER EQUATION//STOCHASTIC GENE EXPRESSION//TAU LEAPING
9 3965 EVOLUT CANC//CANCER GENOME//CANCER GENOMICS
10 24154 IMMUNO PCR//PROXIMITY LIGATION ASSAY//LEHRSTUHL BIOL CHEM MIKROSTRUKTURTECH

Go to start page