Class information for:
Level 1: SEQUENCING BY HYBRIDIZATION//DNA CHIP//DNA GRAPHS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3649 1937 31.0 81%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
1714 2             MOLECULAR BEACON//MUTATION DETECTION//SEQUENCING BY HYBRIDIZATION 6662
3649 1                   SEQUENCING BY HYBRIDIZATION//DNA CHIP//DNA GRAPHS 1937

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SEQUENCING BY HYBRIDIZATION authKW 508128 2% 92% 35
2 DNA CHIP authKW 180744 3% 18% 64
3 DNA GRAPHS authKW 85815 0% 78% 7
4 OLIGONUCLEOTIDE ARRAYS authKW 82346 1% 29% 18
5 DNA SEQUENCING WITH ERRORS authKW 78812 0% 100% 5
6 GAPPED PROBES authKW 78812 0% 100% 5
7 CHEM SENSORS GRP address 77813 1% 22% 22
8 DNA SEQUENCING BY HYBRIDIZATION authKW 63050 0% 100% 4
9 NONSPECIFIC HYBRIDIZATIONS authKW 63050 0% 100% 4
10 HYBRIDIZATION EFFICIENCY authKW 53085 0% 42% 8

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 5901 19% 0% 367
2 Biotechnology & Applied Microbiology 2857 17% 0% 335
3 Chemistry, Analytical 2408 16% 0% 314
4 Biochemistry & Molecular Biology 2371 31% 0% 610
5 Genetics & Heredity 764 10% 0% 185
6 Mathematical & Computational Biology 694 4% 0% 73
7 Biophysics 519 7% 0% 135
8 Nanoscience & Nanotechnology 452 6% 0% 118
9 Chemistry, Multidisciplinary 275 11% 0% 207
10 Electrochemistry 267 4% 0% 73

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHEM SENSORS GRP 77813 1% 22% 22
2 DOO SAN ENGN 50438 0% 80% 4
3 JOINT HUMAN GENOME PROGRAM 42031 0% 67% 4
4 PL MICRONANOTECHNOL 36025 0% 57% 4
5 MOL BIOANAL BIOELECT 35464 0% 75% 3
6 CHEM FUNCT BIOSYST 31525 0% 100% 2
7 GENE EXP S DETECT 31525 0% 100% 2
8 PHD MICROBIOL PROGRAM 31525 0% 100% 2
9 TMAS2 31525 0% 100% 2
10 TRANSPORT MODELING BIOANALYT SEPARAT SCI GRP 31525 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOTECHNIQUES 12295 4% 1% 69
2 NUCLEIC ACIDS RESEARCH 9553 8% 0% 156
3 ANALYTICAL BIOCHEMISTRY 4967 4% 0% 77
4 INTERNATIONAL JOURNAL OF GENOME RESEARCH 4200 0% 13% 2
5 JOURNAL OF COMPUTATIONAL BIOLOGY 3617 1% 1% 19
6 MINERVA BIOTECNOLOGICA 3564 1% 2% 11
7 BIOSENSORS & BIOELECTRONICS 3114 2% 0% 44
8 GENETIC ANALYSIS-BIOMOLECULAR ENGINEERING 2858 0% 3% 7
9 BIOCHIP JOURNAL 2226 0% 2% 8
10 BIOTECHFORUM ( BTF ) 1942 1% 1% 18

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SEQUENCING BY HYBRIDIZATION 508128 2% 92% 35 Search SEQUENCING+BY+HYBRIDIZATION Search SEQUENCING+BY+HYBRIDIZATION
2 DNA CHIP 180744 3% 18% 64 Search DNA+CHIP Search DNA+CHIP
3 DNA GRAPHS 85815 0% 78% 7 Search DNA+GRAPHS Search DNA+GRAPHS
4 OLIGONUCLEOTIDE ARRAYS 82346 1% 29% 18 Search OLIGONUCLEOTIDE+ARRAYS Search OLIGONUCLEOTIDE+ARRAYS
5 DNA SEQUENCING WITH ERRORS 78812 0% 100% 5 Search DNA+SEQUENCING+WITH+ERRORS Search DNA+SEQUENCING+WITH+ERRORS
6 GAPPED PROBES 78812 0% 100% 5 Search GAPPED+PROBES Search GAPPED+PROBES
7 DNA SEQUENCING BY HYBRIDIZATION 63050 0% 100% 4 Search DNA+SEQUENCING+BY+HYBRIDIZATION Search DNA+SEQUENCING+BY+HYBRIDIZATION
8 NONSPECIFIC HYBRIDIZATIONS 63050 0% 100% 4 Search NONSPECIFIC+HYBRIDIZATIONS Search NONSPECIFIC+HYBRIDIZATIONS
9 HYBRIDIZATION EFFICIENCY 53085 0% 42% 8 Search HYBRIDIZATION+EFFICIENCY Search HYBRIDIZATION+EFFICIENCY
10 HETEROBIFUNCTIONAL REAGENT 50438 0% 80% 4 Search HETEROBIFUNCTIONAL+REAGENT Search HETEROBIFUNCTIONAL+REAGENT

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 HELLER, MJ , (2002) DNA MICROARRAY TECHNOLOGY: DEVICES, SYSTEMS, AND APPLICATIONS.ANNUAL REVIEW OF BIOMEDICAL ENGINEERING. VOL. 4. ISSUE . P. 129 -153 78 44% 578
2 HARRISON, A , BINDER, H , BUHOT, A , BURDEN, CJ , CARLON, E , GIBAS, C , GAMBLE, LJ , HALPERIN, A , HOOYBERGHS, J , KREIL, DP , ET AL (2013) PHYSICO-CHEMICAL FOUNDATIONS UNDERPINNING MICROARRAY AND NEXT-GENERATION SEQUENCING EXPERIMENTS.NUCLEIC ACIDS RESEARCH. VOL. 41. ISSUE 5. P. 2779 -2796 52 66% 12
3 BEAUCAGE, SL , (2001) STRATEGIES IN THE PREPARATION OF DNA OLIGONUCLEOTIDE ARRAYS FOR DIAGNOSTIC APPLICATIONS.CURRENT MEDICINAL CHEMISTRY. VOL. 8. ISSUE 10. P. 1213-1244 55 64% 95
4 GAO, XL , GULARI, E , ZHOU, XC , (2004) IN SITU SYNTHESIS OF OLIGONUCLEOTIDE MICROARRAYS.BIOPOLYMERS. VOL. 73. ISSUE 5. P. 579 -596 45 66% 139
5 KINOSHITA, K , FUJIMOTO, K , YAKABE, T , SAITO, S , HAMAGUCHI, Y , KIKUCHI, T , NONAKA, K , MURATA, S , MASUDA, D , TAKADA, W , ET AL (2007) MULTIPLE PRIMER EXTENSION BY DNA POLYMERASE ON A NOVEL PLASTIC DNA ARRAY COATED WITH A BIOCOMPATIBLE POLYMER.NUCLEIC ACIDS RESEARCH. VOL. 35. ISSUE 1. P. - 36 84% 22
6 HACIA, JG , (1999) RESEQUENCING AND MUTATIONAL ANALYSIS USING OLIGONUCLEOTIDE MICROARRAYS.NATURE GENETICS. VOL. 21. ISSUE . P. 42 -47 37 73% 357
7 HACIA, JG , COLLINS, FS , (1999) MUTATIONAL ANALYSIS USING OLIGONUCLEOTIDE MICROARRAYS.JOURNAL OF MEDICAL GENETICS. VOL. 36. ISSUE 10. P. 730-736 42 81% 105
8 PIRRUNG, MC , (2002) HOW TO MAKE A DNA CHIP.ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. VOL. 41. ISSUE 8. P. 1277-+ 47 67% 74
9 POZHITKOV, AE , BOUBE, I , BROUWER, MH , NOBLE, PA , (2010) BEYOND AFFYMETRIX ARRAYS: EXPANDING THE SET OF KNOWN HYBRIDIZATION ISOTHERMS AND OBSERVING PRE-WASH SIGNAL INTENSITIES.NUCLEIC ACIDS RESEARCH. VOL. 38. ISSUE 5. P. - 32 84% 13
10 KETOMAKI, K , HAKALA, H , KURONEN, O , LONNBERG, H , (2003) HYBRIDIZATION PROPERTIES OF SUPPORT-BOUND OLIGONUCLEOTIDES: THE EFFECT OF THE SITE OF IMMOBILIZATION ON THE STABILITY AND SELECTIVITY OF DUPLEX FORMATION.BIOCONJUGATE CHEMISTRY. VOL. 14. ISSUE 4. P. 811-816 43 78% 6

Classes with closest relation at Level 1


Rank Class id link
1 12669 PRIMER DESIGN//SIMULTANEOUS MULTIPLE DETECTION//MICROBIAL DIAGNOSTICS
2 2901 BMC BIOINFORMATICS//MICROARRAY IMAGE//BIOINFORMATICS
3 7202 PROTEIN MICROARRAY//PROTEIN ARRAY//ANTIBODY MICROARRAY
4 35155 AIR QUALITY CONCENTRATED ANIMAL FEEDING OPERATIONS LEGAL ENFORCEMENT//FILTER SCREEN//GENET HIGH THROUGHPUT SEQUENCING IL
5 34980 POLYMETHYL VINYL ETHER MALEIC ANHYDRATE//6 DEOXY 6 METHACRYLOYLAMIDO D GLUCOPYRANOSE//ANTI TRANSGLUTAMINASE ANTIBODIES ANTI TTG
6 33383 SPEL 6//AND PLASMIDS//ASSEMBLY OF DNA FRAGMENTS
7 20853 DNA POOLING//EPIDEMIOL BIOSTAT EPID//PYROSEQUENCING TECHNOLOGY
8 914 DNA BIOSENSOR//ELECTROCHEMICAL DNA BIOSENSOR//DNA HYBRIDIZATION
9 11368 RNA AMPLIFICATION//LASER CAPTURE MICRODISSECTION//LASER MICRODISSECTION
10 26304 SPOT SYNTHESIS//PEPTIDE ARRAY//CHIP BASED PEPTIDE LIB

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