Class information for:
Level 1: DNA POOLING//EPIDEMIOL BIOSTAT EPID//PYROSEQUENCING TECHNOLOGY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
20853 443 26.0 84%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
90 3       MATHEMATICAL & COMPUTATIONAL BIOLOGY//BIOINFORMATICS//BMC BIOINFORMATICS 77178
1714 2             MOLECULAR BEACON//MUTATION DETECTION//SEQUENCING BY HYBRIDIZATION 6662
20853 1                   DNA POOLING//EPIDEMIOL BIOSTAT EPID//PYROSEQUENCING TECHNOLOGY 443

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DNA POOLING authKW 966277 9% 37% 38
2 EPIDEMIOL BIOSTAT EPID address 275711 1% 100% 4
3 PYROSEQUENCING TECHNOLOGY authKW 211083 2% 44% 7
4 TEMPLATE PREPARATION authKW 183804 1% 67% 4
5 PYROSEQUENCING authKW 182451 16% 4% 71
6 LATE PCR authKW 157545 1% 57% 4
7 DNA POOLS authKW 153511 2% 32% 7
8 ADAPTER LIGATION MEDIATED ALLELE SPECIFIC AMPLIFICATION authKW 137855 0% 100% 2
9 COLLAPSED DATA authKW 137855 0% 100% 2
10 FLUORESCENT SIGNATURES authKW 137855 0% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 2710 26% 0% 117
2 Genetics & Heredity 2164 30% 0% 131
3 Biotechnology & Applied Microbiology 886 20% 0% 88
4 Chemistry, Analytical 779 19% 0% 84
5 Mathematical & Computational Biology 638 7% 0% 32
6 Biochemistry & Molecular Biology 547 32% 0% 140
7 Medical Laboratory Technology 116 3% 0% 13
8 Statistics & Probability 22 2% 0% 10
9 Agriculture, Dairy & Animal Science 19 2% 0% 9
10 Pathology 17 2% 0% 11

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EPIDEMIOL BIOSTAT EPID 275711 1% 100% 4
2 STANFORD GENOME TECHNOL 89189 5% 6% 20
3 DNA SEQUENCING TECHNOL 88618 1% 43% 3
4 SERV CIRUGIA GEN B 77540 1% 38% 3
5 BIOTECHNOLKTH 68928 0% 100% 1
6 ENTER PATHOGEN MICROBIOL NHFPC 68928 0% 100% 1
7 EXPT PATHOL MED BIOTECHNOL INFECTIVOL EXPE 68928 0% 100% 1
8 GRP PLANNIG ADM 68928 0% 100% 1
9 INFECT DISMINIST PUBL HLTH CHINA 68928 0% 100% 1
10 MAX MCGEE JUVENILLE DIABET 68928 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOTECHNIQUES 6529 5% 0% 24
2 ANALYTICAL BIOCHEMISTRY 2905 6% 0% 28
3 BIOTECHFORUM ( BTF ) 2144 2% 0% 9
4 BMC GENETICS 2006 2% 0% 7
5 GENETIC EPIDEMIOLOGY 1845 2% 0% 8
6 CHINESE JOURNAL OF ANALYTICAL CHEMISTRY 1749 3% 0% 13
7 ELECTROPHORESIS 1495 4% 0% 16
8 MOLECULAR AND CELLULAR PROBES 1453 1% 0% 6
9 ANNALS OF HUMAN GENETICS 1422 1% 0% 6
10 HUMAN MUTATION 1393 2% 0% 9

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DNA POOLING 966277 9% 37% 38 Search DNA+POOLING Search DNA+POOLING
2 PYROSEQUENCING TECHNOLOGY 211083 2% 44% 7 Search PYROSEQUENCING+TECHNOLOGY Search PYROSEQUENCING+TECHNOLOGY
3 TEMPLATE PREPARATION 183804 1% 67% 4 Search TEMPLATE+PREPARATION Search TEMPLATE+PREPARATION
4 PYROSEQUENCING 182451 16% 4% 71 Search PYROSEQUENCING Search PYROSEQUENCING
5 LATE PCR 157545 1% 57% 4 Search LATE+PCR Search LATE+PCR
6 DNA POOLS 153511 2% 32% 7 Search DNA+POOLS Search DNA+POOLS
7 ADAPTER LIGATION MEDIATED ALLELE SPECIFIC AMPLIFICATION 137855 0% 100% 2 Search ADAPTER+LIGATION+MEDIATED+ALLELE+SPECIFIC+AMPLIFICATION Search ADAPTER+LIGATION+MEDIATED+ALLELE+SPECIFIC+AMPLIFICATION
8 COLLAPSED DATA 137855 0% 100% 2 Search COLLAPSED+DATA Search COLLAPSED+DATA
9 FLUORESCENT SIGNATURES 137855 0% 100% 2 Search FLUORESCENT+SIGNATURES Search FLUORESCENT+SIGNATURES
10 PEDIATRIC ALLERGIC ASTHMA 137855 0% 100% 2 Search PEDIATRIC+ALLERGIC+ASTHMA Search PEDIATRIC+ALLERGIC+ASTHMA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 CHEN, HH , JOU, YS , LEE, WJ , PAN, WH , (2008) APPLYING POLYNOMIAL STANDARD CURVE METHOD TO CORRECT BIAS ENCOUNTERED IN ESTIMATING ALLELE FREQUENCIES USING DNA POOLING STRATEGY.GENOMICS. VOL. 92. ISSUE 6. P. 429-435 22 96% 1
2 ZHANG, XD , WU, HP , ZHOU, GH , (2006) PYROSEQUENCING AND ITS APPLICATION IN GENETICAL ANALYSIS.CHINESE JOURNAL OF ANALYTICAL CHEMISTRY. VOL. 34. ISSUE 4. P. 582-586 23 74% 6
3 BROHEDE, J , DUNNE, R , MCKAY, JD , HANNAN, GN , (2005) PPC: AN ALGORITHM FOR ACCURATE ESTIMATION OF SNP ALLELE FREQUENCIES IN SMALL EQUIMOLAR POOLS OF DNA USING DATA FROM HIGH DENSITY MICROARRAYS.NUCLEIC ACIDS RESEARCH. VOL. 33. ISSUE 17. P. - 23 72% 26
4 SALK, JJ , SANCHEZ, JA , PIERCE, KE , RICE, JE , SOARES, KC , WANGH, LJ , (2006) DIRECT AMPLIFICATION OF SINGLE-STRANDED DNA FOR PYROSEQUENCING USING LINEAR-AFTER-THE-EXPONENTIAL (LATE)-PCR.ANALYTICAL BIOCHEMISTRY. VOL. 353. ISSUE 1. P. 124-132 26 62% 17
5 ILIADIS, A , ANASTASSIOU, D , WANG, XD , (2012) FAST AND ACCURATE HAPLOTYPE FREQUENCY ESTIMATION FOR LARGE HAPLOTYPE VECTORS FROM POOLED DNA DATA.BMC GENETICS. VOL. 13. ISSUE . P. - 17 81% 4
6 GHARIZADEH, B , ERIKSSON, J , NOURIZAD, N , NORDSTROM, T , NYREN, P , (2004) IMPROVEMENTS IN PYROSEQUENCING TECHNOLOGY BY EMPLOYING SEQUENASE POLYMERASE.ANALYTICAL BIOCHEMISTRY. VOL. 330. ISSUE 2. P. 272-280 20 83% 11
7 YANG, HC , LIANG, YJ , HUANG, MC , LI, LH , LIN, CH , WU, JY , CHEN, YT , FANN, CSJ , (2006) A GENOME-WIDE STUDY OF PREFERENTIAL AMPLIFICATION/HYBRIDIZATION IN MICROARRAY-BASED POOLED DNA EXPERIMENTS.NUCLEIC ACIDS RESEARCH. VOL. 34. ISSUE 15. P. - 24 63% 13
8 YANG, HC , HUANG, MC , LI, LH , LIN, CH , YU, ALT , DICCIANNI, MB , WU, JY , CHEN, YT , FANN, CSJ , (2008) MPDA: MICROARRAY POOLED DNA ANALYZER.BMC BIOINFORMATICS. VOL. 9. ISSUE . P. - 28 51% 11
9 JAJAMOVICH, GH , ILIADIS, A , ANASTASSIOU, D , WANG, XD , (2013) MAXIMUM-PARSIMONY HAPLOTYPE FREQUENCIES INFERENCE BASED ON A JOINT CONSTRAINED SPARSE REPRESENTATION OF POOLED DNA.BMC BIOINFORMATICS. VOL. 14. ISSUE . P. - 16 80% 1
10 MASHAYEKHI, F , RONAGHI, M , (2007) ANALYSIS OF READ LENGTH LIMITING FACTORS IN PYROSEQUENCING CHEMISTRY.ANALYTICAL BIOCHEMISTRY. VOL. 363. ISSUE 2. P. 275 -287 18 75% 31

Classes with closest relation at Level 1


Rank Class id link
1 33225 EXO POLYMERASE//RSM ASSAY//3 NUCLEOTIDE DIFFERENCES
2 4394 HAPLOTYPE INFERENCE//LINKAGE DISEQUILIBRIUM//HAPLOTYPE ASSEMBLY
3 11413 RIEVE L S MASS SPE OMETRY//OLIGONUCLEOTIDE SEQUENCING//90T
4 23356 HIGH RESOLUTION MELTING//HIGH RESOLUTION MELTING HRM//HRMA
5 12092 MUTATION DETECTION//CE SSCP//SINGLE STRAND CONFORMATION POLYMORPHISM
6 12480 MOLECULAR BEACON//IN VIVO HYBRIDIZATION//RNA IMAGING
7 3649 SEQUENCING BY HYBRIDIZATION//DNA CHIP//DNA GRAPHS
8 7631 GENETIC EPIDEMIOLOGY//GENOTYPING ERROR//HARDY WEINBERG EQUILIBRIUM
9 22511 GC RICH DNA//HOT START//AU GOLD NANOPARTICLES
10 36366 BLOOMINGTON DROSOPHILA STOCK//BEIJING SPREADING WING//EDGP

Go to start page