Class information for:
Level 1: BACTEROIDES THETAIOTAOMICRON//POLYSACCHARIDE UTILIZATION LOCI//POLYSACCHARIDE UTILIZATION LOCUS

Basic class information

Class id #P Avg. number of
references
Database coverage
of references
29984 176 38.7 72%



Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.



Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
169 3       AGRICULTURE, DAIRY & ANIMAL SCIENCE//POULTRY SCIENCE//BROILER 59415
278 2             PROBIOTICS//MICROBIOTA//GUT MICROBIOTA 19126
29984 1                   BACTEROIDES THETAIOTAOMICRON//POLYSACCHARIDE UTILIZATION LOCI//POLYSACCHARIDE UTILIZATION LOCUS 176

Terms with highest relevance score



rank Term termType Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 BACTEROIDES THETAIOTAOMICRON authKW 241374 5% 17% 8
2 POLYSACCHARIDE UTILIZATION LOCI authKW 223064 2% 43% 3
3 POLYSACCHARIDE UTILIZATION LOCUS authKW 223064 2% 43% 3
4 ADDITIVATED POLYETHYLENE FILMS authKW 173497 1% 100% 1
5 ARRANGEMENT OF CATALYTIC RESIDUES authKW 173497 1% 100% 1
6 BACTERIAL RESILIENCE authKW 173497 1% 100% 1
7 BTGH97A authKW 173497 1% 100% 1
8 CALCIUM ION DEPENDENT GLYCOSIDASE authKW 173497 1% 100% 1
9 CARDINGS address 173497 1% 100% 1
10 CAZYMES DETECTION authKW 173497 1% 100% 1

Web of Science journal categories



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 Microbiology 3046 55% 0% 96
2 Biotechnology & Applied Microbiology 398 21% 0% 37
3 Biochemistry & Molecular Biology 231 32% 0% 57
4 Cell Biology 19 7% 0% 13
5 Biophysics 16 5% 0% 8
6 Biochemical Research Methods 5 3% 0% 5
7 Biology 5 2% 0% 4
8 Agriculture, Dairy & Animal Science 5 2% 0% 3
9 Engineering, Environmental 3 2% 0% 3
10 Parasitiology 3 1% 0% 2

Address terms



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 CARDINGS 173497 1% 100% 1
2 CIENCIAS AGRON BOTUCATU UNESP 173497 1% 100% 1
3 IND MICROBIOLBIOTECHNOL GRP 173497 1% 100% 1
4 POST PROGRAM NANOSCI ADV MAT 173497 1% 100% 1
5 TWB 173497 1% 100% 1
6 EX LERMITUMR 8182 86748 1% 50% 1
7 INRAINSAT 86748 1% 50% 1
8 INTER ULTARY MICROBIOL INFECT MED 86748 1% 50% 1
9 LCOM EG2M 86748 1% 50% 1
10 SANTE RECH MED 1095 86748 1% 50% 1

Journals



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
1 JOURNAL OF BACTERIOLOGY 5710 19% 0% 33
2 MBIO 4841 4% 0% 7
3 APPLIED AND ENVIRONMENTAL MICROBIOLOGY 2557 12% 0% 21
4 NATURE REVIEWS MICROBIOLOGY 699 1% 0% 2
5 CELL HOST & MICROBE 645 1% 0% 2
6 BIOTECHNOLOGY FOR BIOFUELS 618 1% 0% 2
7 BIOCHEMISTRY AND CELL BIOLOGY 603 1% 0% 1
8 PLOS BIOLOGY 597 2% 0% 3
9 MICROBIOLOGYOPEN 491 1% 0% 1
10 ANAEROBE 436 1% 0% 2

Author Key Words



Rank Term Chi square Shr. of publ. in
class containing
term
Class's shr. of
term's tot. occurrences
#P with
term in
class
LCSH search Wikipedia search
1 BACTEROIDES THETAIOTAOMICRON 241374 5% 17% 8 Search BACTEROIDES+THETAIOTAOMICRON Search BACTEROIDES+THETAIOTAOMICRON
2 POLYSACCHARIDE UTILIZATION LOCI 223064 2% 43% 3 Search POLYSACCHARIDE+UTILIZATION+LOCI Search POLYSACCHARIDE+UTILIZATION+LOCI
3 POLYSACCHARIDE UTILIZATION LOCUS 223064 2% 43% 3 Search POLYSACCHARIDE+UTILIZATION+LOCUS Search POLYSACCHARIDE+UTILIZATION+LOCUS
4 ADDITIVATED POLYETHYLENE FILMS 173497 1% 100% 1 Search ADDITIVATED+POLYETHYLENE+FILMS Search ADDITIVATED+POLYETHYLENE+FILMS
5 ARRANGEMENT OF CATALYTIC RESIDUES 173497 1% 100% 1 Search ARRANGEMENT+OF+CATALYTIC+RESIDUES Search ARRANGEMENT+OF+CATALYTIC+RESIDUES
6 BACTERIAL RESILIENCE 173497 1% 100% 1 Search BACTERIAL+RESILIENCE Search BACTERIAL+RESILIENCE
7 BTGH97A 173497 1% 100% 1 Search BTGH97A Search BTGH97A
8 CALCIUM ION DEPENDENT GLYCOSIDASE 173497 1% 100% 1 Search CALCIUM+ION+DEPENDENT+GLYCOSIDASE Search CALCIUM+ION+DEPENDENT+GLYCOSIDASE
9 CAZYMES DETECTION 173497 1% 100% 1 Search CAZYMES+DETECTION Search CAZYMES+DETECTION
10 COMMENSAL FITNESS 173497 1% 100% 1 Search COMMENSAL+FITNESS Search COMMENSAL+FITNESS

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.



Rank Reference # ref.
in cl.
Shr. of ref. in
cl.
Citations
1 FOLEY, MH , COCKBURN, DW , KOROPATKIN, NM , (2016) THE SUS OPERON: A MODEL SYSTEM FOR STARCH UPTAKE BY THE HUMAN GUT BACTEROIDETES.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 73. ISSUE 14. P. 2603 -2617 30 40% 2
2 TAUZIN, AS , KWIATKOWSKI, KJ , ORLOVSKY, NI , SMITH, CJ , CREAGH, AL , HAYNES, CA , WAWRZAK, Z , BRUMER, H , KOROPATKIN, NM , (2016) MOLECULAR DISSECTION OF XYLOGLUCAN RECOGNITION IN A PROMINENT HUMAN GUT SYMBIONT.MBIO. VOL. 7. ISSUE 2. P. - 24 44% 0
3 BOLAM, DN , KOROPATKIN, NM , (2012) GLYCAN RECOGNITION BY THE BACTEROIDETES SUS-LIKE SYSTEMS.CURRENT OPINION IN STRUCTURAL BIOLOGY. VOL. 22. ISSUE 5. P. 563 -569 16 59% 13
4 MARTENS, EC , KOROPATKIN, NM , SMITH, TJ , GORDON, JI , (2009) COMPLEX GLYCAN CATABOLISM BY THE HUMAN GUT MICROBIOTA: THE BACTEROIDETES SUS-LIKE PARADIGM.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 284. ISSUE 37. P. 24673-24677 15 43% 149
5 KARUNATILAKA, KS , CAMERON, EA , MARTENS, EC , KOROPATKIN, NM , BITEEN, JS , (2014) SUPERRESOLUTION IMAGING CAPTURES CARBOHYDRATE UTILIZATION DYNAMICS IN HUMAN GUT SYMBIONTS.MBIO. VOL. 5. ISSUE 6. P. - 16 46% 3
6 RAGHAVAN, V , GROISMAN, EA , (2015) SPECIES-SPECIFIC DYNAMIC RESPONSES OF GUT BACTERIA TO A MAMMALIAN GLYCAN.JOURNAL OF BACTERIOLOGY. VOL. 197. ISSUE 9. P. 1538 -1548 18 38% 3
7 RAGHAVAN, V , LOWE, EC , TOWNSEND, GE , BOLAM, DN , GROISMAN, EA , (2014) TUNING TRANSCRIPTION OF NUTRIENT UTILIZATION GENES TO CATABOLIC RATE PROMOTES GROWTH IN A GUT BACTERIUM.MOLECULAR MICROBIOLOGY. VOL. 93. ISSUE 5. P. 1010 -1025 20 34% 3
8 SCHWALM, ND , TOWNSEND, GE , GROISMAN, EA , (2016) MULTIPLE SIGNALS GOVERN UTILIZATION OF A POLYSACCHARIDE IN THE GUT BACTERIUM BACTEROIDES THETAIOTAOMICRON.MBIO. VOL. 7. ISSUE 5. P. - 14 47% 0
9 COCKBURN, DW , KOROPATKIN, NM , (2016) POLYSACCHARIDE DEGRADATION BY THE INTESTINAL MICROBIOTA AND ITS INFLUENCE ON HUMAN HEALTH AND DISEASE.JOURNAL OF MOLECULAR BIOLOGY. VOL. 428. ISSUE 16. P. 3230 -3252 33 17% 2
10 CAMERON, EA , KWIATKOWSKI, KJ , LEE, BH , HAMAKER, BR , KOROPATKIN, NM , MARTENS, EC , (2014) MULTIFUNCTIONAL NUTRIENT-BINDING PROTEINS ADAPT HUMAN SYMBIOTIC BACTERIA FOR GLYCAN COMPETITION IN THE GUT BY SEPARATELY PROMOTING ENHANCED SENSING AND CATALYSIS.MBIO. VOL. 5. ISSUE 5. P. - 15 39% 5

Classes with closest relation at Level 1



Rank Class id link
1 6255 BACTEROIDES FRAGILIS//CFIA//ENTEROTOXIGENIC BACTEROIDES FRAGILIS
2 6208 FIBROBACTER SUCCINOGENES//RUMEN//FIBROBACTER
3 1386 GUT MICROBIOTA//PREBIOTICS//METAB NUTR GRP
4 16057 BACTEROIDES FRAGILIS//ZWITTERIONIC POLYSACCHARIDE//BACTEROIDES FRAGILIS ENDOTOXIN
5 15638 BETA MANNANASE//MANNANASE//MANNOOLIGOSACCHARIDES
6 22743 CAPNOCYTOPHAGA CANIMORSUS//CAPNOCYTOPHAGA//CAPNOCYTOPHAGA CYNODEGMI
7 21661 ALPHA GLUCOSIDASE//OLIGO 1 6 GLUCOSIDASE//GLYCOSIDE HYDROLASE FAMILY 31
8 1803 METAGENOMICS//MICROBIOME//HUMAN MICROBIOME
9 13717 METHANOBREVIBACTER ORALIS//BREATH METHANE//COLONIC FERMENTATION
10 25395 MICROFLORA ASSOCIATED CHARACTERISTICS//BETA ASPARTYLGLYCINE//MED MICROBIAL ECOL

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