Class information for:
Level 1: AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12801 880 49.8 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
892 2             PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA 11392
12801 1                   AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX 880

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AUTOTRANSPORTER authKW 2100968 10% 70% 87
2 AUTODISPLAY authKW 1199431 4% 89% 39
3 BAM COMPLEX authKW 544598 2% 83% 19
4 OMP85 authKW 416362 2% 67% 18
5 CANADA CHAIR BACTERIAL ANIM DIS address 315433 1% 91% 10
6 TWO PARTNER SECRETION authKW 277574 1% 67% 12
7 TYPE V SECRETION authKW 266902 1% 77% 10
8 OUTER MEMBRANE BIOGENESIS authKW 255499 1% 82% 9
9 LIPOPOLYSACCHARIDE TRANSPORT authKW 208187 1% 100% 6
10 AUTOTRANSPORT authKW 188907 1% 78% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 7867 40% 0% 349
2 Biochemistry & Molecular Biology 3473 52% 0% 459
3 Biophysics 580 10% 0% 90
4 Cell Biology 246 10% 0% 92
5 Biotechnology & Applied Microbiology 242 8% 0% 74
6 Infectious Diseases 189 5% 0% 45
7 Biochemical Research Methods 171 6% 0% 49
8 Immunology 118 7% 0% 65
9 Crystallography 31 2% 0% 20
10 Virology 25 2% 0% 16

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CANADA CHAIR BACTERIAL ANIM DIS 315433 1% 91% 10
2 GENET BIOCHEM BRANCH 90738 3% 12% 22
3 PROT EVOLUT 81355 2% 11% 21
4 SECT MOL MICROBIOL 70307 2% 14% 15
5 EIJKMAN WINKLER INFECT IMMUN 69396 0% 100% 2
6 PHARMAZEUT MED CHEM NAT WISSEN TECH FAK 3 69396 0% 100% 2
7 SECT CELLULAR ARCHITECTURE DYNAM 69396 0% 100% 2
8 BACTERIAL PATHOGENESIS GENOM UNIT 56769 1% 27% 6
9 ABT MOL GENET PR ARAT MOLEKULARBIOL 46262 0% 67% 2
10 U629 43904 1% 13% 10

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR MICROBIOLOGY 12295 7% 1% 65
2 JOURNAL OF BACTERIOLOGY 9787 11% 0% 97
3 MICROBIAL CELL FACTORIES 7394 2% 1% 17
4 INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY 2958 1% 1% 11
5 MOLECULAR MEMBRANE BIOLOGY 2918 1% 1% 8
6 NATURE MICROBIOLOGY 2415 0% 2% 3
7 RESEARCH IN MICROBIOLOGY 2204 1% 0% 13
8 BIOCHIP JOURNAL 1918 1% 1% 5
9 TRENDS IN MICROBIOLOGY 1551 1% 1% 9
10 INFECTION AND IMMUNITY 1462 4% 0% 34

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 AUTOTRANSPORTER 2100968 10% 70% 87 Search AUTOTRANSPORTER Search AUTOTRANSPORTER
2 AUTODISPLAY 1199431 4% 89% 39 Search AUTODISPLAY Search AUTODISPLAY
3 BAM COMPLEX 544598 2% 83% 19 Search BAM+COMPLEX Search BAM+COMPLEX
4 OMP85 416362 2% 67% 18 Search OMP85 Search OMP85
5 TWO PARTNER SECRETION 277574 1% 67% 12 Search TWO+PARTNER+SECRETION Search TWO+PARTNER+SECRETION
6 TYPE V SECRETION 266902 1% 77% 10 Search TYPE+V+SECRETION Search TYPE+V+SECRETION
7 OUTER MEMBRANE BIOGENESIS 255499 1% 82% 9 Search OUTER+MEMBRANE+BIOGENESIS Search OUTER+MEMBRANE+BIOGENESIS
8 LIPOPOLYSACCHARIDE TRANSPORT 208187 1% 100% 6 Search LIPOPOLYSACCHARIDE+TRANSPORT Search LIPOPOLYSACCHARIDE+TRANSPORT
9 AUTOTRANSPORT 188907 1% 78% 7 Search AUTOTRANSPORT Search AUTOTRANSPORT
10 BAMA 165316 1% 53% 9 Search BAMA Search BAMA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 VAN ULSEN, P , RAHMAN, SU , JONG, WSP , DALEKE-SCHERMERHOM, MH , LUIRINK, J , (2014) TYPE V SECRETION: FROM BIOGENESIS TO BIOTECHNOLOGY.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1592 -1611 170 61% 17
2 LEYTON, DL , ROSSITER, AE , HENDERSON, IR , (2012) FROM SELF SUFFICIENCY TO DEPENDENCE: MECHANISMS AND FACTORS IMPORTANT FOR AUTOTRANSPORTER BIOGENESIS.NATURE REVIEWS MICROBIOLOGY. VOL. 10. ISSUE 3. P. 213 -225 102 76% 79
3 NICOLAY, T , VANDERLEYDEN, J , SPAEPEN, S , (2015) AUTOTRANSPORTER-BASED CELL SURFACE DISPLAY IN GRAM-NEGATIVE BACTERIA.CRITICAL REVIEWS IN MICROBIOLOGY. VOL. 41. ISSUE 1. P. 109 -123 108 78% 5
4 GRIJPSTRA, J , ARENAS, J , RUTTEN, L , TOMMASSEN, J , (2013) AUTOTRANSPORTER SECRETION: VARYING ON A THEME.RESEARCH IN MICROBIOLOGY. VOL. 164. ISSUE 6. P. 562-582 133 56% 32
5 SELKRIG, J , LEYTON, DL , WEBB, CT , LITHGOW, T , (2014) ASSEMBLY OF BETA-BARREL PROTEINS INTO BACTERIAL OUTER MEMBRANES.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1542 -1550 85 81% 20
6 BERNSTEIN, HD , (2015) LOOKS CAN BE DECEIVING: RECENT INSIGHTS INTO THE MECHANISM OF PROTEIN SECRETION BY THE AUTOTRANSPORTER PATHWAY.MOLECULAR MICROBIOLOGY. VOL. 97. ISSUE 2. P. 205 -215 80 88% 7
7 DROBNAK, I , BRASELMANN, E , CHANEY, JL , LEYTON, DL , BERNSTEIN, HD , LITHGOW, T , LUIRINK, J , NATARO, JP , CLARK, PL , (2015) OF LINKERS AND AUTOCHAPERONES: AN UNAMBIGUOUS NOMENCLATURE TO IDENTIFY COMMON AND UNCOMMON THEMES FOR AUTOTRANSPORTER SECRETION.MOLECULAR MICROBIOLOGY. VOL. 95. ISSUE 1. P. 1 -16 89 79% 2
8 BENZ, I , SCHMIDT, MA , (2011) STRUCTURES AND FUNCTIONS OF AUTOTRANSPORTER PROTEINS IN MICROBIAL PATHOGENS.INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY. VOL. 301. ISSUE 6. P. 461 -468 86 82% 35
9 RICCI, DP , SILHAVY, TJ , (2012) THE BAM MACHINE: A MOLECULAR COOPER.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1818. ISSUE 4. P. 1067-1084 100 53% 59
10 BAKELAR, J , BUCHANAN, SK , NOINAJ, N , (2016) THE STRUCTURE OF THE BETA-BARREL ASSEMBLY MACHINERY COMPLEX.SCIENCE. VOL. 351. ISSUE 6269. P. 180 -186 34 100% 13

Classes with closest relation at Level 1


Rank Class id link
1 28802 LOLB//LOLA//LOL SYSTEM
2 15103 HTRA1//HTRA//HTRA2
3 5827 PORIN//MALTOPORIN//OUTER MEMBRANE PROTEIN
4 17023 CELL SURFACE DISPLAY//SURFACE DISPLAY//CELL SURFACE ENGINEERING
5 21857 T6SS//TYPE VI SECRETION//TYPE VI SECRETION SYSTEM
6 16004 BETA ROLL//ESCHERICHIA COLI HEMOLYSIN//RTX TOXIN
7 12199 TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY
8 1884 ENTEROPATHOGENIC ESCHERICHIA COLI//EPEC//ENTEROAGGREGATIVE ESCHERICHIA COLI
9 16786 PGLB//OLIGOSACCHARYLTRANSFERASE//ARCHAEAL FLAGELLUM
10 3523 LIPID A//LPXC//KDO

Go to start page