Class information for:
Level 1: TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12199 925 50.5 86%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
910 2             QUORUM SENSING//PSEUDOMONAS AERUGINOSA//N ACYL HOMOSERINE LACTONE 11236
12199 1                   TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY 925

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TYPE IV PILI authKW 870441 6% 45% 59
2 TYPE II SECRETION authKW 699435 3% 76% 28
3 GENERAL SECRETORY PATHWAY authKW 353667 2% 71% 15
4 GENERAL SECRETION PATHWAY authKW 211259 1% 80% 8
5 TWITCHING MOTILITY authKW 192036 2% 36% 16
6 TYPE IV PILIN authKW 147038 1% 64% 7
7 PSEUDOPILUS authKW 137539 1% 83% 5
8 SECRETON authKW 132039 0% 100% 4
9 TYPE II SECRETION SYSTEM T2SS authKW 132039 0% 100% 4
10 PILT authKW 132035 1% 67% 6

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 18834 59% 0% 546
2 Biochemistry & Molecular Biology 2699 46% 0% 422
3 Biophysics 183 6% 0% 57
4 Cell Biology 179 9% 0% 84
5 Infectious Diseases 176 5% 0% 45
6 Genetics & Heredity 126 6% 0% 58
7 Immunology 45 5% 0% 49
8 Biotechnology & Applied Microbiology 18 3% 0% 32
9 Biochemical Research Methods 9 2% 0% 19
10 Parasitiology 7 1% 0% 8

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UPR9027 99838 1% 28% 11
2 URA2172 96990 1% 24% 12
3 INGN SYST MACROMOL 96966 3% 12% 24
4 UNITE GENET MOL 88394 2% 18% 15
5 MICHAEL G DEGROOTE INFECT DIS 83821 3% 10% 25
6 C CINA CELLULAR IMAGING NANOANALYT 66019 0% 100% 2
7 HLTH SCI 4H18 66019 0% 100% 2
8 LISM UPR 9027 66019 0% 100% 2
9 MACROMOL SYST SIGNALLING 66019 0% 100% 2
10 MICROBIOL MC110 66019 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR MICROBIOLOGY 52235 15% 1% 137
2 JOURNAL OF BACTERIOLOGY 37203 21% 1% 193
3 MICROBIOLOGY-SGM 3504 3% 0% 29
4 INFECTION AND IMMUNITY 1742 4% 0% 38
5 GENE 1699 3% 0% 32
6 STRUCTURE 1682 2% 0% 14
7 JOURNAL OF MOLECULAR BIOLOGY 1495 4% 0% 33
8 TRENDS IN MICROBIOLOGY 1475 1% 1% 9
9 RESEARCH IN MICROBIOLOGY 1235 1% 0% 10
10 ANNUAL REVIEW OF MICROBIOLOGY 860 1% 1% 5

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TYPE IV PILI 870441 6% 45% 59 Search TYPE+IV+PILI Search TYPE+IV+PILI
2 TYPE II SECRETION 699435 3% 76% 28 Search TYPE+II+SECRETION Search TYPE+II+SECRETION
3 GENERAL SECRETORY PATHWAY 353667 2% 71% 15 Search GENERAL+SECRETORY+PATHWAY Search GENERAL+SECRETORY+PATHWAY
4 GENERAL SECRETION PATHWAY 211259 1% 80% 8 Search GENERAL+SECRETION+PATHWAY Search GENERAL+SECRETION+PATHWAY
5 TWITCHING MOTILITY 192036 2% 36% 16 Search TWITCHING+MOTILITY Search TWITCHING+MOTILITY
6 TYPE IV PILIN 147038 1% 64% 7 Search TYPE+IV+PILIN Search TYPE+IV+PILIN
7 PSEUDOPILUS 137539 1% 83% 5 Search PSEUDOPILUS Search PSEUDOPILUS
8 SECRETON 132039 0% 100% 4 Search SECRETON Search SECRETON
9 TYPE II SECRETION SYSTEM T2SS 132039 0% 100% 4 Search TYPE+II+SECRETION+SYSTEM+T2SS Search TYPE+II+SECRETION+SYSTEM+T2SS
10 PILT 132035 1% 67% 6 Search PILT Search PILT

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 BERRY, JL , PELICIC, V , (2015) EXCEPTIONALLY WIDESPREAD NANOMACHINES COMPOSED OF TYPE IV PILINS: THE PROKARYOTIC SWISS ARMY KNIVES.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 1. P. 134 -154 176 73% 25
2 NIVASKUMAR, M , FRANCETIC, O , (2014) TYPE II SECRETION SYSTEM: A MAGIC BEANSTALK OR A PROTEIN ESCALATOR.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1568 -1577 146 82% 34
3 KOROTKOV, KV , SANDKVIST, M , HOL, WGJ , (2012) THE TYPE II SECRETION SYSTEM: BIOGENESIS, MOLECULAR ARCHITECTURE AND MECHANISM.NATURE REVIEWS MICROBIOLOGY. VOL. 10. ISSUE 5. P. 336 -351 122 75% 118
4 DOUZI, B , FILLOUX, A , VOULHOUX, R , (2012) ON THE PATH TO UNCOVER THE BACTERIAL TYPE II SECRETION SYSTEM.PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. VOL. 367. ISSUE 1592. P. 1059 -1072 118 86% 45
5 GILTNER, CL , NGUYEN, Y , BURROWS, LL , (2012) TYPE IV PILIN PROTEINS: VERSATILE MOLECULAR MODULES.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 76. ISSUE 4. P. 740 -772 186 44% 102
6 AYERS, M , HOWELL, PL , BURROWS, LL , (2010) ARCHITECTURE OF THE TYPE II SECRETION AND TYPE IV PILUS MACHINERIES.FUTURE MICROBIOLOGY. VOL. 5. ISSUE 8. P. 1203 -1218 105 83% 56
7 FILLOUX, A , (2004) THE UNDERLYING MECHANISMS OF TYPE II PROTEIN SECRETION.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1694. ISSUE 1-3. P. 163-179 118 80% 174
8 BURROWS, LL , (2012) PSEUDOMONAS AERUGINOSA TWITCHING MOTILITY: TYPE IV PILI IN ACTION.ANNUAL REVIEW OF MICROBIOLOGY, VOL 66. VOL. 66. ISSUE . P. 493 -520 98 59% 129
9 MELVILLE, S , CRAIG, L , (2013) TYPE IV PILI IN GRAM-POSITIVE BACTERIA.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 77. ISSUE 3. P. 323 -341 103 64% 35
10 CHANG, YW , RETTBERG, LA , TREUNER-LANGE, A , IWASA, J , SOGAARD-ANDERSEN, L , JENSEN, GJ , (2016) ARCHITECTURE OF THE TYPE IVA PILUS MACHINE.SCIENCE. VOL. 351. ISSUE 6278. P. - 45 79% 18

Classes with closest relation at Level 1


Rank Class id link
1 23959 ANTI ADHESIN VACCINE//ANTI ADHESION VACCINE//ASIALO GM1 GLYCOLIPID
2 16786 PGLB//OLIGOSACCHARYLTRANSFERASE//ARCHAEAL FLAGELLUM
3 3751 NEISSERIA GONORRHOEAE//INFEKT BIOL ABT//NEISSERIA MENINGITIDIS
4 19806 FOOTROT//DICHELOBACTER NODOSUS//OVINE FOOTROT
5 28802 LOLB//LOLA//LOL SYSTEM
6 21303 ARTIFICIAL TRANSFORMATION//E COLI COMPETENCE//SXY
7 9253 BACTERIAL CONJUGATION//RELAXASE//COUPLING PROTEIN
8 8007 MYXOCOCCUS XANTHUS//MYXOBACTERIA//CYTOPHAGA HUTCHINSONII
9 10314 EXOU//EXOS//EXOENZYME S
10 6304 C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP

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