Class information for:
Level 1: MANDELATE RACEMASE//MANDELATE RACEMASE EC 5122//ENOLASE SUPERFAMILY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
24744 303 34.6 72%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
278 3       CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY 43163
2622 2             TRIOSEPHOSPHATE ISOMERASE//HISTIDINE BIOSYNTHESIS//KETOSTEROID ISOMERASE 3550
24744 1                   MANDELATE RACEMASE//MANDELATE RACEMASE EC 5122//ENOLASE SUPERFAMILY 303

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MANDELATE RACEMASE authKW 806202 4% 67% 12
2 MANDELATE RACEMASE EC 5122 authKW 403105 1% 100% 4
3 ENOLASE SUPERFAMILY authKW 403101 2% 67% 6
4 ENZYMATIC RACEMIZATION authKW 302329 1% 100% 3
5 N ACYLAMINO ACID RACEMASE authKW 279930 2% 56% 5
6 L RHAMNOSE CATABOLISM authKW 226745 1% 75% 3
7 N SUCCINYLAMINO ACID RACEMASE authKW 226745 1% 75% 3
8 PSEUDOMONAS PUTIDA ATCC 12633 authKW 226745 1% 75% 3
9 L RHAMNONATE authKW 201553 1% 100% 2
10 MESO GALACTARIC ACID authKW 201553 1% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 1407 56% 0% 170
2 Biotechnology & Applied Microbiology 866 23% 0% 71
3 Biochemical Research Methods 123 8% 0% 23
4 Mathematical & Computational Biology 100 4% 0% 11
5 Microbiology 91 9% 0% 26
6 Biophysics 80 7% 0% 21
7 Mycology 41 2% 0% 5
8 Chemistry, Multidisciplinary 14 8% 0% 23
9 Chemistry, Organic 5 4% 0% 11
10 Food Science & Technology 5 3% 0% 8

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NEW YORK SGX STRUCT GENOM 151161 1% 50% 3
2 ADV MAT NUCL TECHNOL PL BIO NANOTECHNOL 100776 0% 100% 1
3 ADV SYNTH CATALYIS 100776 0% 100% 1
4 BIOL BIOPHYS PROGRAM 100776 0% 100% 1
5 CONSOLIDATED UNIT UIC 154 100776 0% 100% 1
6 INT CRIT RAW MAT ICCRAM 100776 0% 100% 1
7 QUANTITATIVE BIOSCI 100776 0% 100% 1
8 ABORATORY STRUCT BIOINFORMAT PROT DATA BA 80619 1% 40% 2
9 LILLY BIOTECHNOL 57580 1% 14% 4
10 DEV PLICAT TECHNOL 50387 0% 50% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 15442 30% 0% 90
2 HUMAN GENOME NEWS 3052 0% 3% 1
3 ZEITSCHRIFT FUR ALLGEMEINE MIKROBIOLOGIE 2426 1% 1% 3
4 JOURNAL OF THE AGRICULTURAL CHEMICAL SOCIETY OF JAPAN 2113 1% 1% 3
5 AMB EXPRESS 1738 1% 1% 3
6 FUNGAL GENETICS AND BIOLOGY 1259 2% 0% 5
7 JOURNAL OF MICRONUTRIENT ANALYSIS 728 0% 1% 1
8 APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 713 3% 0% 10
9 BIOTECHNOLOGY LETTERS 678 3% 0% 8
10 MICROBIAL BIOTECHNOLOGY 678 1% 0% 2

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MANDELATE RACEMASE 806202 4% 67% 12 Search MANDELATE+RACEMASE Search MANDELATE+RACEMASE
2 MANDELATE RACEMASE EC 5122 403105 1% 100% 4 Search MANDELATE+RACEMASE+EC+5122 Search MANDELATE+RACEMASE+EC+5122
3 ENOLASE SUPERFAMILY 403101 2% 67% 6 Search ENOLASE+SUPERFAMILY Search ENOLASE+SUPERFAMILY
4 ENZYMATIC RACEMIZATION 302329 1% 100% 3 Search ENZYMATIC+RACEMIZATION Search ENZYMATIC+RACEMIZATION
5 N ACYLAMINO ACID RACEMASE 279930 2% 56% 5 Search N+ACYLAMINO+ACID+RACEMASE Search N+ACYLAMINO+ACID+RACEMASE
6 L RHAMNOSE CATABOLISM 226745 1% 75% 3 Search L+RHAMNOSE+CATABOLISM Search L+RHAMNOSE+CATABOLISM
7 N SUCCINYLAMINO ACID RACEMASE 226745 1% 75% 3 Search N+SUCCINYLAMINO+ACID+RACEMASE Search N+SUCCINYLAMINO+ACID+RACEMASE
8 PSEUDOMONAS PUTIDA ATCC 12633 226745 1% 75% 3 Search PSEUDOMONAS+PUTIDA+ATCC+12633 Search PSEUDOMONAS+PUTIDA+ATCC+12633
9 L RHAMNONATE 201553 1% 100% 2 Search L+RHAMNONATE Search L+RHAMNONATE
10 MESO GALACTARIC ACID 201553 1% 100% 2 Search MESO+GALACTARIC+ACID Search MESO+GALACTARIC+ACID

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 GERLT, JA , BABBITT, PC , RAYMENT, I , (2005) DIVERGENT EVOLUTION IN THE ENOLASE SUPERFAMILY: THE INTERPLAY OF MECHANISM AND SPECIFICITY.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 433. ISSUE 1. P. 59-70 37 77% 117
2 GERLT, JA , BABBITT, PC , JACOBSON, MP , ALMO, SC , (2012) DIVERGENT EVOLUTION IN ENOLASE SUPERFAMILY: STRATEGIES FOR ASSIGNING FUNCTIONS.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 287. ISSUE 1. P. 29-34 25 74% 52
3 GERLT, JA , BOUVIER, JT , DAVIDSON, DB , IMKER, HJ , SADKHIN, B , SLATER, DR , WHALEN, KL , (2015) ENZYME FUNCTION INITIATIVE-ENZYME SIMILARITY TOOL (EFI-EST): A WEB TOOL FOR GENERATING PROTEIN SEQUENCE SIMILARITY NETWORKS.BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. VOL. 1854. ISSUE 8. P. 1019 -1037 24 48% 27
4 SWAMINATHAN, S , BURLEY, SK , ALMO, SC , GLASNER, ME , ODOKONYERO, D , RAGUMANI, S , LOPEZ, MS , BONANNO, JB , OZEROVA, NDS , WOODARD, DR , ET AL (2013) DIVERGENT EVOLUTION OF LIGAND BINDING IN THE O-SUCCINYLBENZOATE SYNTHASE FAMILY.BIOCHEMISTRY. VOL. 52. ISSUE 42. P. 7512 -7521 25 58% 6
5 MCMILLAN, AW , LOPEZ, MS , ZHU, MZ , MORSE, BC , YEO, IC , AMOS, J , HULL, K , ROMO, D , GLASNER, ME , (2014) ROLE OF AN ACTIVE SITE LOOP IN THE PROMISCUOUS ACTIVITIES OF AMYCOLATOPSIS SP T-1-60 NSAR/OSBS.BIOCHEMISTRY. VOL. 53. ISSUE 27. P. 4434 -4444 29 48% 4
6 SORIANO-MALDONADO, P , ANDUJAR-SANCHEZ, M , CLEMENTE-JIMENEZ, JM , RODRIGUEZ-VICO, F , HERAS-VAZQUEZ, FJL , MARTINEZ-RODRIGUEZ, S , (2015) BIOCHEMICAL AND MUTATIONAL CHARACTERIZATION OF N-SUCCINYL-AMINO ACID RACEMASE FROM GEOBACILLUS STEAROTHERMOPHILUS CECT49.MOLECULAR BIOTECHNOLOGY. VOL. 57. ISSUE 5. P. 454 -465 22 63% 0
7 ODOKONYERO, D , SAKAI, A , PATSKOVSKY, Y , MALASHKEVICH, VN , FEDOROV, AA , BONANNO, JB , FEDOROV, EV , TORO, R , AGARWAL, R , WANG, CX , ET AL (2014) LOSS OF QUATERNARY STRUCTURE IS ASSOCIATED WITH RAPID SEQUENCE DIVERGENCE IN THE OSBS FAMILY.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 111. ISSUE 23. P. 8535-8540 28 47% 1
8 NAGAR, M , WYATT, BN , ST MAURICE, M , BEARNE, SL , (2015) INACTIVATION OF MANDE LATE RACEMASE BY 3-HYDROXYPYRUVATE REVEALS A POTENTIAL MECHANISTIC LINK BETWEEN ENZYME SUPERFAMILIES.BIOCHEMISTRY. VOL. 54. ISSUE 17. P. 2747 -2757 25 45% 0
9 RAKUS, JF , FEDOROV, AA , FEDOROV, EV , GLASNER, ME , VICK, JE , BABBITT, PC , ALMO, SC , GERLT, JA , (2007) EVOLUTION OF ENZYMATIC ACTIVITIES IN THE ENOLASE SUPERFAMILY: D-MANNONATE DEHYDRATASE FROM NOVOSPHINGOBIUM AROMATICIVORANS.BIOCHEMISTRY. VOL. 46. ISSUE 45. P. 12896-12908 21 62% 10
10 NAGAR, M , BEARNE, SL , (2015) AN ADDITIONAL ROLE FOR THE BRONSTED ACID-BASE CATALYSTS OF MANDELATE RACEMASE IN TRANSITION STATE STABILIZATION.BIOCHEMISTRY. VOL. 54. ISSUE 44. P. 6743 -6752 23 46% 1

Classes with closest relation at Level 1


Rank Class id link
1 20533 ALANINE RACEMASE//GLUTAMATE RACEMASE//RACEMASE
2 20226 RIBOKINASE//ADENOSINE KINASE//D GLUCOSE DEHYDROGENASE
3 22476 4 OXALOCROTONATE TAUTOMERASE//CATALYTIC PROMISCUITY//BIOCATALYTIC PROMISCUITY
4 9196 PROTEIN FUNCTION PREDICTION//COMPLEX SCI SOFTWARE//PHYLOGENETIC MOTIFS
5 22175 HISTIDINE BIOSYNTHESIS//BETA ALPHA8 BARREL//INDOLE 3 GLYCEROL PHOSPHATE SYNTHASE
6 17571 HYDANTOINASE//D HYDANTOINASE//DIHYDROPYRIMIDINASE
7 23900 ASPARTASE//MALEATE CIS TRANS ISOMERASE//MALEATE HYDRATASE
8 19042 ENOLASE//ALPHA ENOLASE//UPPER LIMB BUD
9 24160 ODCASE//OROTIDINE 5 MONOPHOSPHATE DECARBOXYLASE//MOL DESIGN PREFORMULAT
10 22614 AMINOACYLASE//L AMINOACYLASE//D AMINOACYLASE

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