Class information for:
Level 1: ARAC PROTEIN//ARAC//ARAC XYLS FAMILY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
24120 322 35.3 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
804 2             JOURNAL OF BACTERIOLOGY//PHOSPHOTRANSFERASE SYSTEM//PERIPLASMIC BINDING PROTEIN 12049
24120 1                   ARAC PROTEIN//ARAC//ARAC XYLS FAMILY 322

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ARAC PROTEIN authKW 474149 2% 100% 5
2 ARAC authKW 380610 5% 24% 17
3 ARAC XYLS FAMILY authKW 379319 1% 100% 4
4 PEPTIDYL ARM authKW 213365 1% 75% 3
5 ARM DOMAIN INTERACTIONS authKW 189660 1% 100% 2
6 DAHMS PATHWAY authKW 189660 1% 100% 2
7 INGN SYST BIOL PROC LISBP UMR792 address 189660 1% 100% 2
8 RHABAD authKW 189660 1% 100% 2
9 RHAS authKW 189660 1% 100% 2
10 ARABINOSE OPERON authKW 126438 1% 67% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 3434 43% 0% 139
2 Biochemistry & Molecular Biology 955 46% 0% 148
3 Genetics & Heredity 120 9% 0% 30
4 Biotechnology & Applied Microbiology 105 9% 0% 29
5 Biophysics 57 6% 0% 19
6 Biochemical Research Methods 17 3% 0% 11
7 Biology 5 2% 0% 6
8 Mathematical & Computational Biology 1 1% 0% 2
9 Cell Biology 1 3% 0% 10
10 Integrative & Complementary Medicine 1 0% 0% 1

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INGN SYST BIOL PROC LISBP UMR792 189660 1% 100% 2
2 BIOTECHNOLSCI LIFE 94830 0% 100% 1
3 DUMC DURHAM 94830 0% 100% 1
4 ESTAC EXPTL ZAIDIN TO 419 94830 0% 100% 1
5 ISREC BIOINFORMAT GRP 94830 0% 100% 1
6 MOLEC CELL BIOL MICROBIOL VIROL 94830 0% 100% 1
7 PROF ALBAREDA 1 94830 0% 100% 1
8 TRINITY MED CLINICAL MICROBIOL 94830 0% 100% 1
9 BIOCHEM MOL CELLULAR BIOL PLANTS 81508 2% 12% 7
10 SINTEF MAT CHEM 48937 1% 13% 4

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 20774 26% 0% 85
2 JOURNAL OF MOLECULAR BIOLOGY 3644 9% 0% 30
3 ACS SYNTHETIC BIOLOGY 1526 1% 1% 3
4 GENE 1234 5% 0% 16
5 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 1190 3% 0% 9
6 METABOLIC ENGINEERING 797 1% 0% 3
7 MOLECULAR MICROBIOLOGY 784 3% 0% 10
8 MICROBIAL BIOTECHNOLOGY 638 1% 0% 2
9 NUCLEIC ACIDS RESEARCH 593 5% 0% 16
10 BIOENGINEERED 347 0% 0% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ARAC PROTEIN 474149 2% 100% 5 Search ARAC+PROTEIN Search ARAC+PROTEIN
2 ARAC 380610 5% 24% 17 Search ARAC Search ARAC
3 ARAC XYLS FAMILY 379319 1% 100% 4 Search ARAC+XYLS+FAMILY Search ARAC+XYLS+FAMILY
4 PEPTIDYL ARM 213365 1% 75% 3 Search PEPTIDYL+ARM Search PEPTIDYL+ARM
5 ARM DOMAIN INTERACTIONS 189660 1% 100% 2 Search ARM+DOMAIN+INTERACTIONS Search ARM+DOMAIN+INTERACTIONS
6 DAHMS PATHWAY 189660 1% 100% 2 Search DAHMS+PATHWAY Search DAHMS+PATHWAY
7 RHABAD 189660 1% 100% 2 Search RHABAD Search RHABAD
8 RHAS 189660 1% 100% 2 Search RHAS Search RHAS
9 ARABINOSE OPERON 126438 1% 67% 2 Search ARABINOSE+OPERON Search ARABINOSE+OPERON
10 ARAC FAMILY 121921 1% 43% 3 Search ARAC+FAMILY Search ARAC+FAMILY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 SCHLEIF, R , (2010) ARAC PROTEIN, REGULATION OF THE L-ARABINOSE OPERON IN ESCHERICHIA COLI, AND THE LIGHT SWITCH MECHANISM OF ARAC ACTION.FEMS MICROBIOLOGY REVIEWS. VOL. 34. ISSUE 5. P. 779 -796 50 71% 71
2 SEEDORFF, J , SCHLEIF, R , (2011) ACTIVE ROLE OF THE INTERDOMAIN LINKER OF ARAC.JOURNAL OF BACTERIOLOGY. VOL. 193. ISSUE 20. P. 5737 -5746 30 88% 5
3 WICKSTRUM, JR , SKREDENSKE, JM , KOLIN, A , JIN, DJ , FANG, J , EGAN, SM , (2007) TRANSCRIPTION ACTIVATION BY THE DNA-BINDING DOMAIN OF THE ARAC FAMILY PROTEIN RHAS IN THE ABSENCE OF ITS EFFECTOR-BINDING DOMAIN.JOURNAL OF BACTERIOLOGY. VOL. 189. ISSUE 14. P. 4984-4993 32 74% 16
4 KOLIN, A , BALASUBRAMANIAM, V , SKREDENSKE, JM , WICKSTRUM, JR , EGAN, SM , (2008) DIFFERENCES IN THE MECHANISM OF THE ALLOSTERIC L-RHAMNOSE RESPONSES OF THE ARAC/XYLS FAMILY TRANSCRIPTION ACTIVATORS RHAS AND RHAR.MOLECULAR MICROBIOLOGY. VOL. 68. ISSUE 2. P. 448 -461 37 63% 7
5 RODGERS, ME , SCHLEIF, R , (2012) HETERODIMERS REVEAL THAT TWO ARABINOSE MOLECULES ARE REQUIRED FOR THE NORMAL ARABINOSE RESPONSE OF ARAC.BIOCHEMISTRY. VOL. 51. ISSUE 41. P. 8085 -8091 25 78% 0
6 SCHLEIF, R , (2003) ARAC PROTEIN: A LOVE-HATE RELATIONSHIP.BIOESSAYS. VOL. 25. ISSUE 3. P. 274-282 25 83% 73
7 DIRLA, S , CHIEN, JYH , SCHLEIF, R , (2009) CONSTITUTIVE MUTATIONS IN THE ESCHERICHIA COLI ARAC PROTEIN.JOURNAL OF BACTERIOLOGY. VOL. 191. ISSUE 8. P. 2668-2674 21 91% 6
8 KAHRAMANOGLOU, C , WEBSTER, CL , EL-ROBH, MS , BELYAEVA, TA , BUSBY, SJW , (2006) MUTATIONAL ANALYSIS OF THE ESCHERICHIA COLI MELR GENE SUGGESTS A TWO-STATE CONCERTED MODEL TO EXPLAIN TRANSCRIPTIONAL ACTIVATION AND REPRESSION IN THE MELIBIOSE OPERON.JOURNAL OF BACTERIOLOGY. VOL. 188. ISSUE 9. P. 3199-3207 26 79% 11
9 RODGERS, ME , SCHLEIF, R , (2008) DNA TAPE MEASUREMENTS OF ARAC.NUCLEIC ACIDS RESEARCH. VOL. 36. ISSUE 2. P. 404 -410 19 95% 1
10 DOMINGUEZ-CUEVAS, P , MARIN, P , MARQUES, S , RAMOS, JL , (2008) XV1S-PM PROMOTER INTERACTIONS THROUGH TWO HELIX-TURN-HELIX MOTIFS: IDENTIFYING XY1S RESIDUES IMPORTANT FOR DNA BINDING AND ACTIVATION.JOURNAL OF MOLECULAR BIOLOGY. VOL. 375. ISSUE 1. P. 59-69 31 55% 8

Classes with closest relation at Level 1


Rank Class id link
1 18765 CYCLIC AMP RECEPTOR PROTEIN//CATABOLITE ACTIVATOR PROTEIN CAP//CAMP RECEPTOR PROTEIN
2 5558 RNA POLYMERASE//ESCHERICHIA COLI RNA POLYMERASE//SIGMA70
3 16509 TYRR//LONG ACCURATE PCR//BACILLUS SUBTILIS GENOME SEQUENCING
4 6241 LAC REPRESSOR//TRP REPRESSOR//LACTOSE REPRESSOR
5 15721 RARE SUGAR//L ARABINOSE ISOMERASE//D PSICOSE
6 35230 ALKALINE CHAIN CLEAVAGE//ALPHA COLOR//DIFFERENTIAL FLUORESCENCE INDUCTION DFI
7 3513 CATECHOL 1 2 DIOXYGENASE//TOL PLASMID//MUCONATE CYCLOISOMERASE
8 10698 OXYR//SOXRS REGULON//SOXR
9 8564 PERIPLASMIC BINDING PROTEIN//BIOL BAKTERIENPHYSIOL//MALTOSE TRANSPORT
10 10521 LACTOSE PERMEASE//PHYSIOL MICROBIOL//MACDONALD S 5 748

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