Class information for:
Level 1: OXYR//SOXRS REGULON//SOXR

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
10698 1042 40.1 75%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
285 3       ERDOSTEINE//PEROXIREDOXIN//GLUTATHIONE 42405
2794 2             ERGOTHIONEINE//CATALASE PEROXIDASE//MYCOTHIOL 3101
10698 1                   OXYR//SOXRS REGULON//SOXR 1042

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 OXYR authKW 547271 4% 46% 41
2 SOXRS REGULON authKW 287161 1% 70% 14
3 SOXR authKW 225090 1% 59% 13
4 SOXS authKW 196973 1% 61% 11
5 PROGRAM PL BIOL SCI ENVIRONM HLTH address 187536 1% 80% 8
6 EMERGING BACTERIAL INFECT address 159522 1% 39% 14
7 PUBL HLTH MOL CELLULAR TOXICOL address 146515 0% 100% 5
8 SOXRS authKW 133950 1% 57% 8
9 PRE RECRUITMENT authKW 87909 0% 100% 3
10 OXYR REGULON authKW 78139 0% 67% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 13839 48% 0% 500
2 Biochemistry & Molecular Biology 2288 40% 0% 420
3 Biotechnology & Applied Microbiology 498 11% 0% 110
4 Biophysics 221 6% 0% 66
5 Genetics & Heredity 118 6% 0% 61
6 Toxicology 109 4% 0% 40
7 Biochemical Research Methods 44 3% 0% 33
8 Infectious Diseases 26 2% 0% 24
9 Biology 21 2% 0% 21
10 Cell Biology 13 4% 0% 42

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PROGRAM PL BIOL SCI ENVIRONM HLTH 187536 1% 80% 8
2 EMERGING BACTERIAL INFECT 159522 1% 39% 14
3 PUBL HLTH MOL CELLULAR TOXICOL 146515 0% 100% 5
4 ECOL GENET MICROORGANISMS 73803 2% 10% 25
5 RADIOBIOL MOL 68131 1% 23% 10
6 PHYSIOL GENET MICROORGANISMS 65930 0% 75% 3
7 PUBL HLTH MOLEC CELLULAR TOXICOL 50225 1% 29% 6
8 POST EDUC TRAINING PROGRAM ENVIRONM SCI 39069 0% 67% 2
9 AGR BIOTECHNOL FOOD BIOCONVERGE 29303 0% 100% 1
10 BIOTECHNOL PROGRAM BK21 29303 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 31286 18% 1% 188
2 MOLECULAR MICROBIOLOGY 5163 4% 0% 46
3 MUTATION RESEARCH-DNA REPAIR 3835 1% 2% 8
4 FEMS MICROBIOLOGY LETTERS 3361 4% 0% 43
5 MICROBIOLOGY-SGM 2300 2% 0% 25
6 FREE RADICAL RESEARCH COMMUNICATIONS 1560 1% 1% 6
7 JOURNAL OF MICROBIOLOGY 1447 1% 1% 10
8 FREE RADICAL BIOLOGY AND MEDICINE 1333 2% 0% 20
9 ADVANCES IN MICROBIAL PHYSIOLOGY 1126 0% 1% 3
10 MICROBIOLOGY-UK 914 0% 3% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 OXYR 547271 4% 46% 41 Search OXYR Search OXYR
2 SOXRS REGULON 287161 1% 70% 14 Search SOXRS+REGULON Search SOXRS+REGULON
3 SOXR 225090 1% 59% 13 Search SOXR Search SOXR
4 SOXS 196973 1% 61% 11 Search SOXS Search SOXS
5 SOXRS 133950 1% 57% 8 Search SOXRS Search SOXRS
6 PRE RECRUITMENT 87909 0% 100% 3 Search PRE+RECRUITMENT Search PRE+RECRUITMENT
7 OXYR REGULON 78139 0% 67% 4 Search OXYR+REGULON Search OXYR+REGULON
8 ANTIBIOTIC RESISTANCE REGULATION 58606 0% 100% 2 Search ANTIBIOTIC+RESISTANCE+REGULATION Search ANTIBIOTIC+RESISTANCE+REGULATION
9 HYDROGEN PEROXIDE RESISTANT MUTANT 58606 0% 100% 2 Search HYDROGEN+PEROXIDE+RESISTANT+MUTANT Search HYDROGEN+PEROXIDE+RESISTANT+MUTANT
10 LAMBDA PLACMU53 58606 0% 100% 2 Search LAMBDA+PLACMU53 Search LAMBDA+PLACMU53

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 CHIANG, SM , SCHELLHORN, HE , (2012) REGULATORS OF OXIDATIVE STRESS RESPONSE GENES IN ESCHERICHIA COLI AND THEIR FUNCTIONAL CONSERVATION IN BACTERIA.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 525. ISSUE 2. P. 161 -169 91 47% 74
2 IMLAY, JA , (2013) THE MOLECULAR MECHANISMS AND PHYSIOLOGICAL CONSEQUENCES OF OXIDATIVE STRESS: LESSONS FROM A MODEL BACTERIUM.NATURE REVIEWS MICROBIOLOGY. VOL. 11. ISSUE 7. P. 443-454 55 44% 214
3 IMLAY, JA , (2015) TRANSCRIPTION FACTORS THAT DEFEND BACTERIA AGAINST REACTIVE OXYGEN SPECIES.ANNUAL REVIEW OF MICROBIOLOGY, VOL 69. VOL. 69. ISSUE . P. 93 -108 60 53% 10
4 IMLAY, JA , (2008) CELLULAR DEFENSES AGAINST SUPEROXIDE AND HYDROGEN PEROXIDE.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 77. ISSUE . P. 755-776 54 39% 601
5 DUBBS, JM , MONGKOLSUK, S , (2012) PEROXIDE-SENSING TRANSCRIPTIONAL REGULATORS IN BACTERIA.JOURNAL OF BACTERIOLOGY. VOL. 194. ISSUE 20. P. 5495 -5503 57 48% 57
6 GU, MZ , IMLAY, JA , (2011) THE SOXRS RESPONSE OF ESCHERICHIA COLI IS DIRECTLY ACTIVATED BY REDOX-CYCLING DRUGS RATHER THAN BY SUPEROXIDE.MOLECULAR MICROBIOLOGY. VOL. 79. ISSUE 5. P. 1136 -1150 41 63% 84
7 FUJIKAWA, M , KOBAYASHI, K , TSUTSUI, Y , TANAKA, T , KOZAWA, T , (2017) RATIONAL TUNING OF SUPEROXIDE SENSITIVITY IN SOXR, THE [2FE-2S] TRANSCRIPTION FACTOR: IMPLICATIONS OF SPECIES-SPECIFIC LYSINE RESIDUES.BIOCHEMISTRY. VOL. 56. ISSUE 2. P. 403 -410 27 61% 1
8 FU, HH , YUAN, J , GAO, HC , (2015) MICROBIAL OXIDATIVE STRESS RESPONSE: NOVEL INSIGHTS FROM ENVIRONMENTAL FACULTATIVE ANAEROBIC BACTERIA.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 584. ISSUE . P. 28 -35 60 45% 2
9 SHAH, IM , WOLF, RE , (2006) INHIBITION OF LON-DEPENDENT DEGRADATION OF THE ESCHERICHIA COLI TRANSCRIPTION ACTIVATOR SOXS BY INTERACTION WITH 'SOXBOX' DNA OR RNA POLYMERASE.MOLECULAR MICROBIOLOGY. VOL. 60. ISSUE 1. P. 199-208 34 83% 14
10 SAIKOLAPPAN, S , DAS, K , DHANDAYUTHAPANI, S , (2015) INACTIVATION OF THE ORGANIC HYDROPEROXIDE STRESS RESISTANCE REGULATOR OHRR ENHANCES RESISTANCE TO OXIDATIVE STRESS AND ISONIAZID IN MYCOBACTERIUM SMEGMATIS.JOURNAL OF BACTERIOLOGY. VOL. 197. ISSUE 1. P. 51 -62 35 58% 5

Classes with closest relation at Level 1


Rank Class id link
1 30741 OFF RISK ASSESSMENT COORDINAT//ANTIOXIDANTS REDOX BIOL TOXICOL//VITAS PHARMA PRIVATE LTD
2 11754 CATALASE PEROXIDASE//KATG//INHA
3 6308 SUPEROXIDE DISMUTASE//IRON SUPEROXIDE DISMUTASE//SODC
4 24939 IST FARMACOL FARMACOGNOSIA//FARMACOL ONCOL SPERIMENTALE//DNA SINGLE STRAND BREAKAGE
5 13486 RPOS//CURLI//UVI31
6 13407 YAP1//BIFUNCTIONAL GLUTATHIONE SYNTHETASE//YAP1P
7 7584 FERRIC UPTAKE REGULATOR//FUR//NIKR
8 24365 SUPEROXIDE REDUCTASE//RUBRERYTHRIN//DESULFOFERRODOXIN
9 24120 ARAC PROTEIN//ARAC//ARAC XYLS FAMILY
10 3970 EFFLUX PUMP INHIBITOR//EFFLUX PUMPS//EMRE

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