Class information for:
Level 1: LACTOSE PERMEASE//PHYSIOL MICROBIOL//MACDONALD S 5 748

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
10521 1056 41.7 70%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
804 2             JOURNAL OF BACTERIOLOGY//PHOSPHOTRANSFERASE SYSTEM//PERIPLASMIC BINDING PROTEIN 12049
10521 1                   LACTOSE PERMEASE//PHYSIOL MICROBIOL//MACDONALD S 5 748 1056

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LACTOSE PERMEASE authKW 917655 4% 72% 44
2 PHYSIOL MICROBIOL address 417809 2% 85% 17
3 MACDONALD S 5 748 address 246391 1% 61% 14
4 MELIBIOSE CARRIER authKW 202402 1% 100% 7
5 MAJOR FACILITATOR SUPERFAMILY authKW 161660 2% 23% 24
6 CYS REPLACEMENTS authKW 144573 0% 100% 5
7 SYMPORT authKW 144050 2% 29% 17
8 CYS MODIFICATION authKW 130112 1% 75% 6
9 GLPT authKW 130112 1% 75% 6
10 CATION COTRANSPORT authKW 115658 0% 100% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 10470 79% 0% 839
2 Biophysics 1998 16% 0% 174
3 Microbiology 527 11% 0% 112
4 Cell Biology 321 11% 0% 114
5 Physiology 46 3% 0% 35
6 Biology 27 2% 0% 23
7 Biochemical Research Methods 7 2% 0% 20
8 Microscopy 0 0% 0% 2
9 Multidisciplinary Sciences 0 0% 0% 4
10 Materials Science, Biomaterials 0 0% 0% 3

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHYSIOL MICROBIOL 417809 2% 85% 17
2 MACDONALD S 5 748 246391 1% 61% 14
3 BIOL CELLULAIRE MOLEC J MAETZ 86744 0% 100% 3
4 PHYSIOL MICROBIOL IMMUNOL MOL GENET 86744 0% 100% 3
5 MACDONALD S 85029 1% 29% 10
6 ERS 1253 80314 0% 56% 5
7 MACDONALD S 5748 66087 0% 57% 4
8 CEA 16V 57829 0% 100% 2
9 LRC 16V 57829 0% 100% 2
10 LRCCEA 16V 57829 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 15841 16% 0% 171
2 JOURNAL OF MEMBRANE BIOLOGY 5560 3% 1% 30
3 JOURNAL OF BIOLOGICAL CHEMISTRY 5017 16% 0% 164
4 BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 4412 3% 0% 31
5 MOLECULAR MEMBRANE BIOLOGY 3800 1% 1% 10
6 JOURNAL OF BACTERIOLOGY 3383 6% 0% 63
7 CELL MEMBRANES-METHODS AND REVIEWS 2222 0% 8% 1
8 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 2006 8% 0% 83
9 MEMBRANE BIOCHEMISTRY 1621 0% 2% 3
10 PROTEIN SCIENCE 1304 2% 0% 17

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 LACTOSE PERMEASE 917655 4% 72% 44 Search LACTOSE+PERMEASE Search LACTOSE+PERMEASE
2 MELIBIOSE CARRIER 202402 1% 100% 7 Search MELIBIOSE+CARRIER Search MELIBIOSE+CARRIER
3 MAJOR FACILITATOR SUPERFAMILY 161660 2% 23% 24 Search MAJOR+FACILITATOR+SUPERFAMILY Search MAJOR+FACILITATOR+SUPERFAMILY
4 CYS REPLACEMENTS 144573 0% 100% 5 Search CYS+REPLACEMENTS Search CYS+REPLACEMENTS
5 SYMPORT 144050 2% 29% 17 Search SYMPORT Search SYMPORT
6 CYS MODIFICATION 130112 1% 75% 6 Search CYS+MODIFICATION Search CYS+MODIFICATION
7 GLPT 130112 1% 75% 6 Search GLPT Search GLPT
8 CATION COTRANSPORT 115658 0% 100% 4 Search CATION+COTRANSPORT Search CATION+COTRANSPORT
9 SPLIT PERMEASE 115658 0% 100% 4 Search SPLIT+PERMEASE Search SPLIT+PERMEASE
10 PUTP 115654 1% 67% 6 Search PUTP Search PUTP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 GUAN, L , KABACK, HR , (2006) LESSONS FROM LACTOSE PERMEASE.ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE. VOL. 35. ISSUE . P. 67 -91 86 88% 148
2 KABACK, HR , (2015) A CHEMIOSMOTIC MECHANISM OF SYMPORT.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 112. ISSUE 5. P. 1259 -1264 58 95% 12
3 FRILLINGOS, S , SAHIN-TOTH, M , WU, JH , KABACK, HR , (1998) CYS-SCANNING MUTAGENESIS: A NOVEL APPROACH TO STRUCTURE-FUNCTION RELATIONSHIPS IN POLYTOPIC MEMBRANE PROTEINS.FASEB JOURNAL. VOL. 12. ISSUE 13. P. 1281 -1299 85 76% 221
4 KUMAR, H , KASHO, V , SMIRNOVA, I , FINER-MOORE, JS , KABACK, HR , STROUD, RM , (2014) STRUCTURE OF SUGAR-BOUND LACY.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 111. ISSUE 5. P. 1784 -1788 50 83% 31
5 POOLMAN, B , KONINGS, WN , (1993) SECONDARY SOLUTE TRANSPORT IN BACTERIA.BIOCHIMICA ET BIOPHYSICA ACTA. VOL. 1183. ISSUE 1. P. 5-39 152 54% 131
6 VARELA, MF , WILSON, TH , (1996) MOLECULAR BIOLOGY OF THE LACTOSE CARRIER OF ESCHERICHIA COLI.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1276. ISSUE 1. P. 21-34 88 87% 62
7 FRANCO, PJ , MATZKE, EA , JOHNSON, JL , WICZER, BM , BROOKER, RJ , (2006) A SUPPRESSOR ANALYSIS OF RESIDUES INVOLVED IN CATION TRANSPORT IN THE LACTOSE PERMEASE: IDENTIFICATION OF A COUPLING SENSOR.JOURNAL OF MEMBRANE BIOLOGY. VOL. 211. ISSUE 2. P. 101-113 60 100% 3
8 GAIKO, O , BAZZONE, A , FENDLER, K , KABACK, HR , (2013) ELECTROPHYSIOLOGICAL CHARACTERIZATION OF UNCOUPLED MUTANTS OF LACY.BIOCHEMISTRY. VOL. 52. ISSUE 46. P. 8261-8266 51 98% 1
9 SMIRNOVA, I , KASHO, V , SUGIHARA, J , KABACK, HR , (2013) TRP REPLACEMENTS FOR TIGHTLY INTERACTING GLY-GLY PAIRS IN LACY STABILIZE AN OUTWARD-FACING CONFORMATION.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 110. ISSUE 22. P. 8876-8881 52 95% 3
10 ZHOU, YG , MADEJ, MG , GUAN, L , NIE, YL , KABACK, HR , (2011) AN EARLY EVENT IN THE TRANSPORT MECHANISM OF LACY PROTEIN INTERACTION BETWEEN HELICES V AND I.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 286. ISSUE 35. P. 30415-30422 53 90% 6

Classes with closest relation at Level 1


Rank Class id link
1 20819 TET REPRESSOR//TETRACYCLINE H ANTIPORTER//TETRACYCLINE RESISTANCE PROTEIN
2 18868 MALONATE DECARBOXYLASE//ACIDAMINOCOCCUS FERMENTANS//OXALOACETATE DECARBOXYLASE
3 27440 DYE LINKED L PROLINE DEHYDROGENASE//PUTA//PROLINE UTILIZATION A
4 8283 NHAA//NA H ANTIPORTER//NADH QUINONE REDUCTASE
5 22457 DING PROTEIN//PHO REGULON//PHOSPHATE BINDING PROTEIN
6 24120 ARAC PROTEIN//ARAC//ARAC XYLS FAMILY
7 3970 EFFLUX PUMP INHIBITOR//EFFLUX PUMPS//EMRE
8 8564 PERIPLASMIC BINDING PROTEIN//BIOL BAKTERIENPHYSIOL//MALTOSE TRANSPORT
9 3393 PHOSPHOTRANSFERASE SYSTEM//HPR//PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE SYSTEM
10 4131 TRANSMEMBRANE HELIX//TRANSMEMBRANE HELICES//MEMBRANE PROTEIN

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