Class information for:
Level 1: PHARMACEUT CHEM BIOANALYT//XL MS//CHEMICAL CROSS LINKING

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
22328 385 42.1 88%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
157 3       JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//BIOCHEMICAL RESEARCH METHODS//INTERNATIONAL JOURNAL OF MASS SPECTROMETRY 61558
2163 2             ION MOBILITY SPECTROMETRY//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//ION MOBILITY 4985
22328 1                   PHARMACEUT CHEM BIOANALYT//XL MS//CHEMICAL CROSS LINKING 385

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHARMACEUT CHEM BIOANALYT address 1195753 7% 54% 28
2 XL MS authKW 475871 2% 100% 6
3 CHEMICAL CROSS LINKING authKW 471578 9% 17% 35
4 CROSS LINKING MASS SPECTROMETRY authKW 283254 1% 71% 5
5 PROTEIN 3D STRUCTURE authKW 247075 2% 35% 9
6 PROTEIN INTERACTION REPORTER authKW 237936 1% 100% 3
7 CROSS LINKED PEPTIDES authKW 178450 1% 75% 3
8 IN VIVO PROTEIN INTERACTIONS authKW 178450 1% 75% 3
9 BS2G authKW 158624 1% 100% 2
10 CID CLEAVABLE CROSSLINKERS authKW 158624 1% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 10481 55% 0% 210
2 Chemistry, Analytical 2115 32% 0% 124
3 Spectroscopy 1725 19% 0% 72
4 Biochemistry & Molecular Biology 414 30% 0% 115
5 Mathematical & Computational Biology 148 4% 0% 15
6 Biophysics 22 4% 0% 15
7 Biotechnology & Applied Microbiology 21 5% 0% 18
8 Chemistry, Physical 13 7% 0% 28
9 Physics, Atomic, Molecular & Chemical 7 3% 0% 12
10 Cell Biology 7 4% 0% 17

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHARMACEUT CHEM BIOANALYT 1195753 7% 54% 28
2 GRP ARTIFICIAL BINDING PROT 158624 1% 100% 2
3 GENOME BRITISH COLUMBIA PROTE 122001 3% 15% 10
4 BIOINFORMAT RMN STRUCTUMR 5086 79312 0% 100% 1
5 BIOL STRUCT CHIMUNITE BIOINFORMAT STRUCT 79312 0% 100% 1
6 BIOL STRUCTPROT MASS SPE OMETRY UMR 5 79312 0% 100% 1
7 BIOL STRUCTPROTEINS MASS SPE OMETRY 79312 0% 100% 1
8 BIOTECHNOL ADV BIOMOL CLUSTER 79312 0% 100% 1
9 CS 80054 79312 0% 100% 1
10 DIEPSBTNSERV BIOCHIM POST GEN TOXICOL NUCL 79312 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR & CELLULAR PROTEOMICS 23154 8% 1% 30
2 JOURNAL OF PROTEOME RESEARCH 13305 8% 1% 32
3 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 12437 7% 1% 27
4 JOURNAL OF MASS SPECTROMETRY 6229 4% 0% 16
5 EUROPEAN JOURNAL OF MASS SPECTROMETRY 5239 2% 1% 8
6 ANALYTICAL CHEMISTRY 4864 12% 0% 47
7 PROTEOMICS 3530 4% 0% 16
8 NATURE METHODS 2988 2% 0% 8
9 METHODS 2599 3% 0% 10
10 JOURNAL OF PROTEOMICS 2425 2% 0% 9

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 XL MS 475871 2% 100% 6 Search XL+MS Search XL+MS
2 CHEMICAL CROSS LINKING 471578 9% 17% 35 Search CHEMICAL+CROSS+LINKING Search CHEMICAL+CROSS+LINKING
3 CROSS LINKING MASS SPECTROMETRY 283254 1% 71% 5 Search CROSS+LINKING+MASS+SPECTROMETRY Search CROSS+LINKING+MASS+SPECTROMETRY
4 PROTEIN 3D STRUCTURE 247075 2% 35% 9 Search PROTEIN+3D+STRUCTURE Search PROTEIN+3D+STRUCTURE
5 PROTEIN INTERACTION REPORTER 237936 1% 100% 3 Search PROTEIN+INTERACTION+REPORTER Search PROTEIN+INTERACTION+REPORTER
6 CROSS LINKED PEPTIDES 178450 1% 75% 3 Search CROSS+LINKED+PEPTIDES Search CROSS+LINKED+PEPTIDES
7 IN VIVO PROTEIN INTERACTIONS 178450 1% 75% 3 Search IN+VIVO+PROTEIN+INTERACTIONS Search IN+VIVO+PROTEIN+INTERACTIONS
8 BS2G 158624 1% 100% 2 Search BS2G Search BS2G
9 CID CLEAVABLE CROSSLINKERS 158624 1% 100% 2 Search CID+CLEAVABLE+CROSSLINKERS Search CID+CLEAVABLE+CROSSLINKERS
10 CLEAVABLE CROSS LINKERS 158624 1% 100% 2 Search CLEAVABLE+CROSS+LINKERS Search CLEAVABLE+CROSS+LINKERS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 FAN, SB , WU, YJ , YANG, B , CHI, H , MENG, JM , LU, S , ZHANG, K , WU, L , SUN, RX , DONG, MQ , ET AL (2014) A NEW APPROACH TO PROTEIN STRUCTURE AND INTERACTION RESEARCH: CHEMICAL CROSS-LINKING IN COMBINATION WITH MASS SPECTROMETRY.PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS. VOL. 41. ISSUE 11. P. 1109 -1125 84 78% 1
2 AEBERSOLD, R , LEITNER, A , FAINI, M , STENGEL, F , (2016) CROSSLINKING AND MASS SPECTROMETRY: AN INTEGRATED TECHNOLOGY TO UNDERSTAND THE STRUCTURE AND FUNCTION OF MOLECULAR MACHINES.TRENDS IN BIOCHEMICAL SCIENCES. VOL. 41. ISSUE 1. P. 20 -32 61 55% 14
3 TRAN, BQ , GOODLETT, DR , GOO, YA , (2016) ADVANCES IN PROTEIN COMPLEX ANALYSIS BY CHEMICAL CROSS-LINKING COUPLED WITH MASS SPECTROMETRY (CXMS) AND BIOINFORMATICS.BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. VOL. 1864. ISSUE 1. P. 123 -129 60 87% 2
4 RAPPSILBER, J , (2011) THE BEGINNING OF A BEAUTIFUL FRIENDSHIP: CROSS-LINKING/MASS SPECTROMETRY AND MODELLING OF PROTEINS AND MULTI-PROTEIN COMPLEXES.JOURNAL OF STRUCTURAL BIOLOGY. VOL. 173. ISSUE 3. P. 530 -540 65 65% 140
5 CALABRESE, AN , PUKALA, TL , (2013) CHEMICAL CROSS-LINKING AND MASS SPECTROMETRY FOR THE STRUCTURAL ANALYSIS OF PROTEIN ASSEMBLIES.AUSTRALIAN JOURNAL OF CHEMISTRY. VOL. 66. ISSUE 7. P. 749-759 63 74% 6
6 SINZ, A , (2014) THE ADVANCEMENT OF CHEMICAL CROSS-LINKING AND MASS SPECTROMETRY FOR STRUCTURAL PROTEOMICS: FROM SINGLE PROTEINS TO PROTEIN INTERACTION NETWORKS.EXPERT REVIEW OF PROTEOMICS. VOL. 11. ISSUE 6. P. 733 -743 48 79% 23
7 PETROTCHENKO, EV , BORCHERS, CH , (2010) CROSSLINKING COMBINED WITH MASS SPECTROMETRY FOR STRUCTURAL PROTEOMICS.MASS SPECTROMETRY REVIEWS. VOL. 29. ISSUE 6. P. 862-876 40 87% 87
8 SINZ, A , (2017) DIVIDE AND CONQUER: CLEAVABLE CROSS-LINKERS TO STUDY PROTEIN CONFORMATION AND PROTEIN-PROTEIN INTERACTIONS.ANALYTICAL AND BIOANALYTICAL CHEMISTRY. VOL. 409. ISSUE 1. P. 33 -44 42 88% 0
9 GOTZE, M , PETTELKAU, J , FRITZSCHE, R , IHLING, CH , SCHAFER, M , SINZ, A , (2015) AUTOMATED ASSIGNMENT OF MS/MS CLEAVABLE CROSS-LINKS IN PROTEIN 3D-STRUCTURE ANALYSIS.JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY. VOL. 26. ISSUE 1. P. 83 -97 40 78% 11
10 HAGE, C , IHLING, CH , GOTZE, M , SCHAFER, M , SINZ, A , (2017) DISSOCIATION BEHAVIOR OF A TEMPO-ACTIVE ESTER CROSS-LINKER FOR PEPTIDE STRUCTURE ANALYSIS BY FREE RADICAL INITIATED PEPTIDE SEQUENCING (FRIPS) IN NEGATIVE ESI-MS.JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY. VOL. 28. ISSUE 1. P. 56 -68 30 71% 1

Classes with closest relation at Level 1


Rank Class id link
1 12119 HYDROGEN EXCHANGE//HYDROGEN DEUTERIUM EXCHANGE//HDX
2 7355 ION ION REACTIONS//ELECTRON CAPTURE DISSOCIATION//ELECTRON TRANSFER DISSOCIATION
3 18286 DIAZIRINE//PHOTOAFFINITY LABELING//BIORECOGNIT CHEM
4 2154 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//NONCOVALENT COMPLEXES//ION MOBILITY
5 1508 PEPTIDE IDENTIFICATION//JOURNAL OF PROTEOME RESEARCH//PROTEIN IDENTIFICATION
6 8239 QUANTITATIVE PROTEOMICS//STABLE ISOTOPE LABELING//ISOBARIC TAG
7 10709 PEPTIDE FRAGMENTATION//PROTONATED PEPTIDES//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
8 33873 MASS SPECTROMETRIC EPITOPE MAPPING//RA33 AUTOANTIGEN//PEPTIDE CHIP ANALYSIS
9 6443 PROTEIN PROTEIN DOCKING//CAPRI//PROTEIN DOCKING
10 14228 BIMOLECULAR FLUORESCENCE COMPLEMENTATION//SPLIT UBIQUITIN//PROTEIN FRAGMENT COMPLEMENTATION ASSAY

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