Class information for:
Level 1: URACIL DNA GLYCOSYLASE//DUTPASE//MBD4

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
10667 1043 40.7 78%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
142 3       DNA REPAIR//INTERNATIONAL JOURNAL OF RADIATION BIOLOGY//RADIATION RESEARCH 64602
1228 2             BASE EXCISION REPAIR//DNA GLYCOSYLASE//OXIDATIVE DNA DAMAGE 9086
10667 1                   URACIL DNA GLYCOSYLASE//DUTPASE//MBD4 1043

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 URACIL DNA GLYCOSYLASE authKW 1701726 9% 62% 94
2 DUTPASE authKW 1521352 7% 73% 71
3 MBD4 authKW 296393 2% 56% 18
4 DUTP PYROPHOSPHATASE authKW 208175 1% 89% 8
5 DUTP authKW 169370 1% 64% 9
6 URACIL DNA GLYCOSYLASE INHIBITOR authKW 117100 0% 100% 4
7 UNG authKW 112584 1% 38% 10
8 UDG authKW 110203 1% 47% 8
9 GENOME METAB REPAIR address 93678 0% 80% 4
10 DEOXYURIDINE TRIPHOSPHATE NUCLEOTIDOHYDROLASE authKW 87825 0% 100% 3

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 4894 56% 0% 588
2 Virology 1046 8% 0% 84
3 Biophysics 831 11% 0% 116
4 Toxicology 567 8% 0% 80
5 Genetics & Heredity 488 10% 0% 107
6 Cell Biology 292 10% 0% 109
7 Oncology 172 9% 0% 91
8 Biochemical Research Methods 161 5% 0% 53
9 Crystallography 97 3% 0% 34
10 Biotechnology & Applied Microbiology 91 5% 0% 57

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GENOME METAB REPAIR 93678 0% 80% 4
2 ENZYMOL 68417 5% 4% 57
3 SOUTH CAROLINA EXPT STN 65867 0% 75% 3
4 GENOME METAB 58550 0% 100% 2
5 DOCTORAL MULTIDISCIPLINARY MED SCI 52692 0% 60% 3
6 PL BIOTECHNOL FOOD SCI 45518 2% 8% 19
7 RADIOL CHEM BIOMED ENGN 39032 0% 67% 2
8 BIOCHEM 576 MED SCI BLDG 29275 0% 100% 1
9 BIOCHEM BIOPHYS MICROBIOL 29275 0% 100% 1
10 BIOCHEM MOLEC BIOL STRUCT BIOCHEM SECT 29275 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DNA REPAIR 19660 4% 2% 37
2 NUCLEIC ACIDS RESEARCH 6052 9% 0% 91
3 CURRENT PROTEIN & PEPTIDE SCIENCE 3255 1% 1% 10
4 MUTATION RESEARCH-DNA REPAIR 2932 1% 1% 7
5 JOURNAL OF BIOLOGICAL CHEMISTRY 2092 10% 0% 107
6 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 1472 1% 0% 15
7 PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1366 0% 1% 5
8 BIOCHEMISTRY 1046 4% 0% 45
9 MUTATION RESEARCH 1014 2% 0% 17
10 ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY 831 1% 0% 6

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 URACIL DNA GLYCOSYLASE 1701726 9% 62% 94 Search URACIL+DNA+GLYCOSYLASE Search URACIL+DNA+GLYCOSYLASE
2 DUTPASE 1521352 7% 73% 71 Search DUTPASE Search DUTPASE
3 MBD4 296393 2% 56% 18 Search MBD4 Search MBD4
4 DUTP PYROPHOSPHATASE 208175 1% 89% 8 Search DUTP+PYROPHOSPHATASE Search DUTP+PYROPHOSPHATASE
5 DUTP 169370 1% 64% 9 Search DUTP Search DUTP
6 URACIL DNA GLYCOSYLASE INHIBITOR 117100 0% 100% 4 Search URACIL+DNA+GLYCOSYLASE+INHIBITOR Search URACIL+DNA+GLYCOSYLASE+INHIBITOR
7 UNG 112584 1% 38% 10 Search UNG Search UNG
8 UDG 110203 1% 47% 8 Search UDG Search UDG
9 DEOXYURIDINE TRIPHOSPHATE NUCLEOTIDOHYDROLASE 87825 0% 100% 3 Search DEOXYURIDINE+TRIPHOSPHATE+NUCLEOTIDOHYDROLASE Search DEOXYURIDINE+TRIPHOSPHATE+NUCLEOTIDOHYDROLASE
10 THYMIDYLATE DEPRIVATION 87825 0% 100% 3 Search THYMIDYLATE+DEPRIVATION Search THYMIDYLATE+DEPRIVATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 VERTESSY, BG , TOTH, J , (2009) KEEPING URACIL OUT OF DNA: PHYSIOLOGICAL ROLE, STRUCTURE AND CATALYTIC MECHANISM OF DUTPASES.ACCOUNTS OF CHEMICAL RESEARCH. VOL. 42. ISSUE 1. P. 97 -106 49 88% 63
2 SCHORMANN, N , RICCIARDI, R , CHATTOPADHYAY, D , (2014) URACIL-DNA GLYCOSYLASES-STRUCTURAL AND FUNCTIONAL PERSPECTIVES ON AN ESSENTIAL FAMILY OF DNA REPAIR ENZYMES.PROTEIN SCIENCE. VOL. 23. ISSUE 12. P. 1667 -1685 52 70% 15
3 NYIRI, K , PAPP-KADAR, V , SZABO, JE , NEMETH, V , VERTESSY, BG , (2015) EXPLORING THE ROLE OF THE PHAGE-SPECIFIC INSERT OF BACTERIOPHAGE I BROKEN VERTICAL BAR 11 DUTPASE.STRUCTURAL CHEMISTRY. VOL. 26. ISSUE 5-6. P. 1425 -1432 40 93% 1
4 VASILENKO, NL , NEVINSKY, GA , (2003) PATHWAYS OF ACCUMULATION AND REPAIR OF DEOXYURIDINE RESIDUES IN DNA OF HIGHER AND LOWER ORGANISMS.BIOCHEMISTRY-MOSCOW. VOL. 68. ISSUE 2. P. 135-151 61 76% 3
5 MOSBAUGH, DW , BENNETT, SE , (1994) URACIL-EXCISION DNA-REPAIR.PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 48. VOL. 48. ISSUE . P. 315 -370 106 53% 72
6 HIZI, A , HERZIG, E , (2015) DUTPASE: THE FREQUENTLY OVERLOOKED ENZYME ENCODED BY MANY RETROVIRUSES.RETROVIROLOGY. VOL. 12. ISSUE . P. - 54 58% 3
7 ZHARKOV, DO , MECHETIN, GV , NEVINSKY, GA , (2010) URACIL-DNA GLYCOSYLASE: STRUCTURAL, THERMODYNAMIC AND KINETIC ASPECTS OF LESION SEARCH AND RECOGNITION.MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS. VOL. 685. ISSUE 1-2. P. 11 -20 53 58% 37
8 KROKAN, HE , DRABLOS, F , SLUPPHAUG, G , (2002) URACIL IN DNA - OCCURRENCE, CONSEQUENCES AND REPAIR.ONCOGENE. VOL. 21. ISSUE 58. P. 8935-8948 56 56% 211
9 HIRMONDO, R , SZABO, JE , NYIRI, K , TARJANYI, S , DOBROTKA, P , TOTH, J , VERTESSY, BG , (2015) CROSS-SPECIES INHIBITION OF DUTPASE VIA THE STAPHYLOCOCCAL STL PROTEIN PERTURBS DNTP POOL AND COLONY FORMATION IN MYCOBACTERIUM.DNA REPAIR. VOL. 30. ISSUE . P. 21 -27 38 72% 1
10 SZABO, JE , NEMETH, V , PAPP-KADAR, V , NYIRI, K , LEVELES, I , BENDES, AA , ZAGYVA, I , RONA, G , PALINKAS, HL , BESZTERCEI, B , ET AL (2014) HIGHLY POTENT DUTPASE INHIBITION BY A BACTERIAL REPRESSOR PROTEIN REVEALS A NOVEL MECHANISM FOR GENE EXPRESSION CONTROL.NUCLEIC ACIDS RESEARCH. VOL. 42. ISSUE 19. P. 11912 -11920 33 79% 4

Classes with closest relation at Level 1


Rank Class id link
1 1886 DNA GLYCOSYLASE//BASE EXCISION REPAIR//8 OXOGUANINE
2 23242 ENDONUCLEASE V//S CAROLINA EXPT STN//OXANINE
3 11880 APE1//AP ENDONUCLEASE//APE1 REF 1
4 22052 DCMP HYDROXYMETHYLASE//ACTIVE OXYGEN QUENCHING//ADENINE PHOSPHORIBOSYLTRANFERASE
5 7148 SOMATIC HYPERMUTATION//ACTIVATION INDUCED CYTIDINE DEAMINASE//CLASS SWITCH RECOMBINATION
6 26087 CYTIDINE DEAMINASE//ANTIBIOTIC FUNGICIDE//BLASTICIDIN S
7 23453 ABASIC SITE//REGULATORY BIOORGAN CHEM//CHIM BIOORGANLEDSS
8 4599 MISMATCH REPAIR//MUTS//DNA MISMATCH REPAIR
9 7353 URIDINE PHOSPHORYLASE//5 PHENYLTHIOACYCLOURIDINE//LEUCOVORIN
10 12511 VPR//SAMHD1//VPX

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