Class information for:
Level 2: BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2396 4226 36.3 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
405 3       BACTERIORHODOPSIN//G PROTEIN COUPLED RECEPTOR//G PROTEIN 29641
2396 2             BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE 4226
162 1                   BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE 4067
35888 1                   HIGH ENERGY ELECTRODES//BARRIERLESS CHARGE TRANSFER//INDUCTIVE MODEL OF THE ELECTRIC DOUBLE LAYER 90
36965 1                   ABNORMAL SHAPE//CH3COOLI CENTER DOT 2H2O//DI2 METHYLPYRIDINIUM TETRACHLOROMANGANATE II 69

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BACTERIORHODOPSIN authKW 2993753 14% 68% 606
2 PURPLE MEMBRANE authKW 712383 3% 75% 131
3 PHOTOCYCLE authKW 689162 3% 78% 122
4 RETINAL PROTEIN authKW 243977 1% 66% 51
5 M INTERMEDIATE authKW 166145 1% 100% 23
6 SENSORY RHODOPSIN authKW 141077 1% 78% 25
7 HALORHODOPSIN authKW 118466 1% 46% 36
8 RETINAL authKW 114876 2% 20% 80
9 MICROBIAL RHODOPSIN authKW 111125 0% 77% 20
10 OPTOBIOTECHNOL address 108649 0% 79% 19

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biophysics 40433 36% 0% 1501
2 Biochemistry & Molecular Biology 14231 49% 0% 2054
3 Chemistry, Physical 1067 14% 0% 571
4 Cell Biology 519 8% 0% 326
5 Chemistry, Multidisciplinary 389 9% 0% 393
6 Optics 156 4% 0% 171
7 Biology 106 2% 0% 91
8 Physics, Atomic, Molecular & Chemical 104 3% 0% 141
9 Biochemical Research Methods 88 3% 0% 107
10 Electrochemistry 60 2% 0% 71

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 OPTOBIOTECHNOL 108649 0% 79% 19
2 WM KECK MOL ELECT 39367 0% 32% 17
3 KECK CELLULAR VISUALIZAT 36408 0% 46% 11
4 UNITAT BIOFIS 34838 1% 19% 26
5 PHOTOBIOCHEM 28891 0% 67% 6
6 LASER DYNAM 26163 1% 11% 33
7 MEMBRANE BIOL 25348 1% 8% 46
8 PL BIOTECHNOL SYST ANAL 23114 0% 80% 4
9 MORPHOL FUNCT BIOMED SCI 21671 0% 100% 3
10 STATE TRANSIENT OPT TECHNOL 17709 1% 11% 22

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOPHYSICAL JOURNAL 59412 9% 2% 401
2 PHOTOCHEMISTRY AND PHOTOBIOLOGY 49143 6% 3% 239
3 BIOCHEMISTRY 21878 10% 1% 405
4 BIOLOGICHESKIE MEMBRANY 7522 1% 2% 53
5 BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 5592 1% 1% 54
6 FEBS LETTERS 4489 4% 0% 163
7 JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 3648 1% 1% 47
8 EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 2922 1% 1% 30
9 BIOPHYSICAL CHEMISTRY 2794 1% 1% 41
10 JOURNAL OF PHYSICAL CHEMISTRY B 2790 3% 0% 126

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 BACTERIORHODOPSIN 2993753 14% 68% 606 Search BACTERIORHODOPSIN Search BACTERIORHODOPSIN
2 PURPLE MEMBRANE 712383 3% 75% 131 Search PURPLE+MEMBRANE Search PURPLE+MEMBRANE
3 PHOTOCYCLE 689162 3% 78% 122 Search PHOTOCYCLE Search PHOTOCYCLE
4 RETINAL PROTEIN 243977 1% 66% 51 Search RETINAL+PROTEIN Search RETINAL+PROTEIN
5 M INTERMEDIATE 166145 1% 100% 23 Search M+INTERMEDIATE Search M+INTERMEDIATE
6 SENSORY RHODOPSIN 141077 1% 78% 25 Search SENSORY+RHODOPSIN Search SENSORY+RHODOPSIN
7 HALORHODOPSIN 118466 1% 46% 36 Search HALORHODOPSIN Search HALORHODOPSIN
8 RETINAL 114876 2% 20% 80 Search RETINAL Search RETINAL
9 MICROBIAL RHODOPSIN 111125 0% 77% 20 Search MICROBIAL+RHODOPSIN Search MICROBIAL+RHODOPSIN
10 PROTON PUMP 86746 2% 12% 97 Search PROTON+PUMP Search PROTON+PUMP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 LANYI, JK , (1999) BACTERIORHODOPSIN.INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL 187. VOL. 187. ISSUE . P. 161 -202 211 96% 48
2 INOUE, K , TSUKAMOTO, T , SUDO, Y , (2014) MOLECULAR AND EVOLUTIONARY ASPECTS OF MICROBIAL SENSORY RHODOPSINS.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1837. ISSUE 5. P. 562 -577 147 92% 5
3 HAUPTS, U , TITTOR, J , OESTERHELT, D , (1999) CLOSING IN ON BACTERIORHODOPSIN: PROGRESS IN UNDERSTANDING THE MOLECULE.ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE. VOL. 28. ISSUE . P. 367 -399 145 89% 399
4 LANYI, JK , VARO, G , (1995) THE PHOTOCYCLES OF BACTERIORHODOPSIN.ISRAEL JOURNAL OF CHEMISTRY. VOL. 35. ISSUE 3-4. P. 365 -385 196 98% 96
5 ERNST, OP , LODOWSKI, DT , ELSTNER, M , HEGEMANN, P , BROWN, LS , KANDORI, H , (2014) MICROBIAL AND ANIMAL RHODOPSINS: STRUCTURES, FUNCTIONS, AND MOLECULAR MECHANISMS.CHEMICAL REVIEWS. VOL. 114. ISSUE 1. P. 126 -163 195 37% 101
6 BALASHOV, SP , (2000) PROTONATION REACTIONS AND THEIR COUPLING IN BACTERIORHODOPSIN.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1460. ISSUE 1. P. 75 -94 157 99% 110
7 LANYI, JK , (2004) BACTERIORHODOPSIN.ANNUAL REVIEW OF PHYSIOLOGY. VOL. 66. ISSUE . P. 665-688 117 96% 296
8 LANYI, JK , (1993) PROTON TRANSLOCATION MECHANISM AND ENERGETICS IN THE LIGHT-DRIVEN PUMP BACTERIORHODOPSIN.BIOCHIMICA ET BIOPHYSICA ACTA. VOL. 1183. ISSUE 2. P. 241-261 153 95% 331
9 HAMPP, N , (2000) BACTERIORHODOPSIN AS A PHOTOCHROMIC RETINAL PROTEIN FOR OPTICAL MEMORIES.CHEMICAL REVIEWS. VOL. 100. ISSUE 5. P. 1755 -1776 113 91% 344
10 KAULEN, AD , (2000) ELECTROGENIC PROCESSES AND PROTEIN CONFORMATIONAL CHANGES ACCOMPANYING THE BACTERIORHODOPSIN PHOTOCYCLE.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1460. ISSUE 1. P. 204 -219 143 100% 25

Classes with closest relation at Level 2


Rank Class id link
1 705 G PROTEIN COUPLED RECEPTOR//GPCR//RHODOPSIN
2 3516 CYTOSOLIC NADH OXIDATION//EXOGENOUS NADH//3 CAPACITOR MODEL
3 2006 BACTERIAL CHEMOTAXIS//MYXOCOCCUS XANTHUS//BACTERIAL FLAGELLUM
4 1209 CHLOROSOME//BACTERIOCHLOROPHYLL//REACTION CENTER
5 2289 PHYTOCHROME//PHOTOTROPIN//PHOTOMORPHOGENESIS
6 1192 OPTOGENETICS//MULTIPHOTON MICROSCOPY//FLUORESCENT PROTEIN
7 1371 MAGIC ANGLE SPINNING//SOLID STATE NMR//SOLID STATE NUCLEAR MAGNETIC RESONANCE
8 2596 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//ACTA CRYSTALLOGRAPHICA SECTION A//ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
9 2462 LINEAR DICHROIC EFFECTS//H D ISOTOPIC EFFECTS//INTRAMOLECULAR HYDROGEN BOND
10 246 LIPID BILAYER//CHEMISTRY AND PHYSICS OF LIPIDS//BIOPHYSICAL JOURNAL

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