Class information for:
Level 2: OPTOGENETICS//MULTIPHOTON MICROSCOPY//FLUORESCENT PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
1192 9265 38.2 82%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
10 4 OPTICS//PHYSICS, PARTICLES & FIELDS//PHYSICS, MULTIDISCIPLINARY 1131262
359 3       JOURNAL OF BIOMEDICAL OPTICS//BIOMEDICAL OPTICS EXPRESS//OPTICS 34746
1192 2             OPTOGENETICS//MULTIPHOTON MICROSCOPY//FLUORESCENT PROTEIN 9265
2299 1                   FLUORESCENT PROTEIN//GREEN FLUORESCENT PROTEIN//CELL FUNCT DYNAM 2289
3982 1                   MULTIPHOTON MICROSCOPY//LASER OPTOELECT TECHNOL//FUJIAN PROV PHOTON TECHNOL 1869
7722 1                   COHERENT ANTI STOKES RAMAN SCATTERING//CARS MICROSCOPY//CARS 1336
9943 1                   OPTOGENETICS//CHANNELRHODOPSIN//OPTICAL STIMULATION 1105
10041 1                   FLIM//WM KECK CELLULAR IMAGING//FLUORESCENCE LIFETIME IMAGING 1097
17338 1                   VOLTAGE SENSITIVE DYE//OPTICAL RECORDING//EMBRYONIC BRAIN STEM 605
17984 1                   MICROENDOSCOPY//ENDOMICROSCOPE//IMAGE FIBER 572
22149 1                   GENETICALLY ENCODED CALCIUM INDICATORS//NETWORK IMAGING GRP//CORTICAL PYRAMIDAL CELL 392

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 OPTOGENETICS authKW 276974 3% 34% 245
2 MULTIPHOTON MICROSCOPY authKW 262243 2% 46% 174
3 FLUORESCENT PROTEIN authKW 200539 2% 30% 206
4 COHERENT ANTI STOKES RAMAN SCATTERING authKW 183164 1% 55% 102
5 NONLINEAR MICROSCOPY authKW 161596 1% 60% 82
6 CHANNELRHODOPSIN authKW 152142 1% 61% 76
7 FLIM authKW 149860 1% 44% 103
8 VOLTAGE SENSITIVE DYE authKW 141396 1% 32% 135
9 JOURNAL OF BIOMEDICAL OPTICS journal 115211 5% 8% 429
10 FLUORESCENCE LIFETIME IMAGING authKW 111363 1% 48% 71

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Optics 31150 25% 0% 2304
2 Biochemical Research Methods 21994 17% 0% 1561
3 Microscopy 10299 4% 1% 344
4 Biophysics 5142 9% 0% 879
5 Radiology, Nuclear Medicine & Medical Imaging 3092 8% 0% 764
6 Neurosciences 2949 13% 0% 1179
7 Biochemistry & Molecular Biology 1904 16% 0% 1497
8 Cell Biology 1309 8% 0% 751
9 Physics, Atomic, Molecular & Chemical 590 4% 0% 416
10 Chemistry, Physical 488 8% 0% 761

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CELL FUNCT DYNAM 103739 1% 40% 78
2 LASER OPTOELECT TECHNOL 100596 1% 56% 55
3 FUJIAN PROV PHOTON TECHNOL 88322 1% 36% 74
4 OPTOELECT SCI TECHNOL MEDMINIST EDUC 81393 0% 60% 41
5 WM KECK CELLULAR IMAGING 75029 0% 84% 27
6 CNC PROGRAM 53506 0% 51% 32
7 LASER OPTOELECT TECHNOLMINIST EDUC 40146 0% 76% 16
8 ADV TECHNOL DEV GRP 39478 0% 33% 36
9 OPTOELECT SCI TECHNOL MED 39311 1% 20% 61
10 JAMES H CLARK BIOMED ENGN SCI 37143 0% 59% 19

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BIOMEDICAL OPTICS 115211 5% 8% 429
2 BIOMEDICAL OPTICS EXPRESS 93117 3% 11% 247
3 JOURNAL OF BIOPHOTONICS 37872 1% 12% 93
4 NATURE METHODS 20484 1% 6% 103
5 OPTICS EXPRESS 18487 5% 1% 443
6 NEUROPHOTONICS 17055 0% 22% 24
7 OPTICS LETTERS 12132 4% 1% 336
8 BIOPHYSICAL JOURNAL 11294 3% 1% 263
9 JOURNAL OF MICROSCOPY 10572 1% 4% 91
10 MICROSCOPY RESEARCH AND TECHNIQUE 6953 1% 2% 91

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 OPTOGENETICS 276974 3% 34% 245 Search OPTOGENETICS Search OPTOGENETICS
2 MULTIPHOTON MICROSCOPY 262243 2% 46% 174 Search MULTIPHOTON+MICROSCOPY Search MULTIPHOTON+MICROSCOPY
3 FLUORESCENT PROTEIN 200539 2% 30% 206 Search FLUORESCENT+PROTEIN Search FLUORESCENT+PROTEIN
4 COHERENT ANTI STOKES RAMAN SCATTERING 183164 1% 55% 102 Search COHERENT+ANTI+STOKES+RAMAN+SCATTERING Search COHERENT+ANTI+STOKES+RAMAN+SCATTERING
5 NONLINEAR MICROSCOPY 161596 1% 60% 82 Search NONLINEAR+MICROSCOPY Search NONLINEAR+MICROSCOPY
6 CHANNELRHODOPSIN 152142 1% 61% 76 Search CHANNELRHODOPSIN Search CHANNELRHODOPSIN
7 FLIM 149860 1% 44% 103 Search FLIM Search FLIM
8 VOLTAGE SENSITIVE DYE 141396 1% 32% 135 Search VOLTAGE+SENSITIVE+DYE Search VOLTAGE+SENSITIVE+DYE
9 FLUORESCENCE LIFETIME IMAGING 111363 1% 48% 71 Search FLUORESCENCE+LIFETIME+IMAGING Search FLUORESCENCE+LIFETIME+IMAGING
10 GREEN FLUORESCENT PROTEIN 94658 3% 10% 283 Search GREEN+FLUORESCENT+PROTEIN Search GREEN+FLUORESCENT+PROTEIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 CHUDAKOV, DM , MATZ, MV , LUKYANOV, S , LUKYANOV, KA , (2010) FLUORESCENT PROTEINS AND THEIR APPLICATIONS IN IMAGING LIVING CELLS AND TISSUES.PHYSIOLOGICAL REVIEWS. VOL. 90. ISSUE 3. P. 1103 -1163 285 61% 411
2 DAY, RN , DAVIDSON, MW , (2009) THE FLUORESCENT PROTEIN PALETTE: TOOLS FOR CELLULAR IMAGING.CHEMICAL SOCIETY REVIEWS. VOL. 38. ISSUE 10. P. 2887 -2921 175 88% 229
3 ACHARYA, A , BOGDANOV, AM , GRIGORENKO, BL , BRAVAYA, KB , NEMUKHIN, AV , LUKYANOV, KA , KRYLOV, AI , (2017) PHOTOINDUCED CHEMISTRY IN FLUORESCENT PROTEINS: CURSE OR BLESSING?.CHEMICAL REVIEWS. VOL. 117. ISSUE 2. P. 758 -795 218 79% 0
4 NIENHAUS, K , NIENHAUS, GU , (2014) FLUORESCENT PROTEINS FOR LIVE-CELL IMAGING WITH SUPER-RESOLUTION.CHEMICAL SOCIETY REVIEWS. VOL. 43. ISSUE 4. P. 1088-1106 157 71% 84
5 DEDECKER, P , DE SCHRYVER, FC , HOFKENS, J , (2013) FLUORESCENT PROTEINS: SHINE ON, YOU CRAZY DIAMOND.JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. VOL. 135. ISSUE 7. P. 2387-2402 164 75% 53
6 KRAFFT, C , SCHIE, IW , MEYER, T , SCHMITT, M , POPP, J , (2016) DEVELOPMENTS IN SPONTANEOUS AND COHERENT RAMAN SCATTERING MICROSCOPIC IMAGING FOR BIOMEDICAL APPLICATIONS.CHEMICAL SOCIETY REVIEWS. VOL. 45. ISSUE 7. P. 1819 -1849 131 60% 9
7 ZHANG, C , ZHANG, DL , CHENG, JX , (2015) COHERENT RAMAN SCATTERING MICROSCOPY IN BIOLOGY AND MEDICINE.ANNUAL REVIEW OF BIOMEDICAL ENGINEERING, VOL 17. VOL. 17. ISSUE . P. 415 -445 137 88% 3
8 SUBACH, FV , VERKHUSHA, VV , (2012) CHROMOPHORE TRANSFORMATIONS IN RED FLUORESCENT PROTEINS.CHEMICAL REVIEWS. VOL. 112. ISSUE 7. P. 4308-4327 127 86% 49
9 WARDEN, MR , CARDIN, JA , DEISSEROTH, K , (2014) OPTICAL NEURAL INTERFACES.ANNUAL REVIEW OF BIOMEDICAL ENGINEERING, VOL 16. VOL. 16. ISSUE . P. 103 -129 106 75% 38
10 ZIMMER, M , (2002) GREEN FLUORESCENT PROTEIN (GFP): APPLICATIONS, STRUCTURE, AND RELATED PHOTOPHYSICAL BEHAVIOR.CHEMICAL REVIEWS. VOL. 102. ISSUE 3. P. 759 -781 131 64% 618

Classes with closest relation at Level 2


Rank Class id link
1 1278 NANOBIOPHOTON//SUPER RESOLUTION MICROSCOPY//HIGH CONTENT SCREENING
2 2225 FLUORESCENCE CORRELATION SPECTROSCOPY//SINGLE MOLECULE SPECTROSCOPY//SINGLE MOLECULE DETECTION
3 815 JOURNAL OF BIOMEDICAL OPTICS//BIOMEDICAL OPTICS EXPRESS//PHOTOACOUSTIC IMAGING
4 1889 TWO PHOTON ABSORPTION//Z SCAN//OPTICAL LIMITING
5 1537 CELL FREE PROTEIN SYNTHESIS//INTEIN//PROTEIN SPLICING
6 1734 RAMAN SPECTROSCOPY//APPLIED SPECTROSCOPY//CHILAK ATI
7 2396 BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE
8 2261 ROOM TEMPERATURE PHOSPHORESCENCE//PHOSPHORIMETRY//SOLID MATRIX LUMINESCENCE
9 1586 RETINAL PROSTHESIS//FUNCTIONAL ELECTRICAL STIMULATION//VISUAL PROSTHESIS
10 2289 PHYTOCHROME//PHOTOTROPIN//PHOTOMORPHOGENESIS

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