Class information for:
Level 1: BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
162 4067 37.0 67%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
405 3       BACTERIORHODOPSIN//G PROTEIN COUPLED RECEPTOR//G PROTEIN 29641
2396 2             BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE 4226
162 1                   BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE 4067

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BACTERIORHODOPSIN authKW 3090338 15% 68% 604
2 PURPLE MEMBRANE authKW 717810 3% 74% 129
3 PHOTOCYCLE authKW 716115 3% 78% 122
4 RETINAL PROTEIN authKW 253519 1% 66% 51
5 M INTERMEDIATE authKW 172642 1% 100% 23
6 SENSORY RHODOPSIN authKW 146594 1% 78% 25
7 HALORHODOPSIN authKW 123100 1% 46% 36
8 MICROBIAL RHODOPSIN authKW 115471 0% 77% 20
9 OPTOBIOTECHNOL address 112898 0% 79% 19
10 RETINAL authKW 107727 2% 19% 76

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biophysics 42069 37% 0% 1500
2 Biochemistry & Molecular Biology 14914 50% 0% 2053
3 Chemistry, Physical 963 13% 0% 537
4 Cell Biology 552 8% 0% 325
5 Chemistry, Multidisciplinary 244 8% 0% 333
6 Optics 170 4% 0% 171
7 Biology 115 2% 0% 91
8 Physics, Atomic, Molecular & Chemical 111 3% 0% 140
9 Biochemical Research Methods 97 3% 0% 107
10 Nanoscience & Nanotechnology 39 2% 0% 85

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 OPTOBIOTECHNOL 112898 0% 79% 19
2 WM KECK MOL ELECT 40907 0% 32% 17
3 KECK CELLULAR VISUALIZAT 37832 0% 46% 11
4 UNITAT BIOFIS 36202 1% 19% 26
5 PHOTOBIOCHEM 30021 0% 67% 6
6 LASER DYNAM 27189 1% 11% 33
7 MEMBRANE BIOL 26343 1% 8% 46
8 PL BIOTECHNOL SYST ANAL 24018 0% 80% 4
9 MORPHOL FUNCT BIOMED SCI 22519 0% 100% 3
10 STATE TRANSIENT OPT TECHNOL 18403 1% 11% 22

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOPHYSICAL JOURNAL 61766 10% 2% 401
2 PHOTOCHEMISTRY AND PHOTOBIOLOGY 51083 6% 3% 239
3 BIOCHEMISTRY 22764 10% 1% 405
4 BIOLOGICHESKIE MEMBRANY 7820 1% 2% 53
5 BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 5815 1% 1% 54
6 FEBS LETTERS 4677 4% 0% 163
7 JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 3794 1% 1% 47
8 EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 3039 1% 1% 30
9 JOURNAL OF PHYSICAL CHEMISTRY B 2909 3% 0% 126
10 BIOPHYSICAL CHEMISTRY 2907 1% 1% 41

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 BACTERIORHODOPSIN 3090338 15% 68% 604 Search BACTERIORHODOPSIN Search BACTERIORHODOPSIN
2 PURPLE MEMBRANE 717810 3% 74% 129 Search PURPLE+MEMBRANE Search PURPLE+MEMBRANE
3 PHOTOCYCLE 716115 3% 78% 122 Search PHOTOCYCLE Search PHOTOCYCLE
4 RETINAL PROTEIN 253519 1% 66% 51 Search RETINAL+PROTEIN Search RETINAL+PROTEIN
5 M INTERMEDIATE 172642 1% 100% 23 Search M+INTERMEDIATE Search M+INTERMEDIATE
6 SENSORY RHODOPSIN 146594 1% 78% 25 Search SENSORY+RHODOPSIN Search SENSORY+RHODOPSIN
7 HALORHODOPSIN 123100 1% 46% 36 Search HALORHODOPSIN Search HALORHODOPSIN
8 MICROBIAL RHODOPSIN 115471 0% 77% 20 Search MICROBIAL+RHODOPSIN Search MICROBIAL+RHODOPSIN
9 RETINAL 107727 2% 19% 76 Search RETINAL Search RETINAL
10 PROTON PUMP 90144 2% 12% 97 Search PROTON+PUMP Search PROTON+PUMP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 LANYI, JK , (1999) BACTERIORHODOPSIN.INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL 187. VOL. 187. ISSUE . P. 161 -202 211 96% 48
2 INOUE, K , TSUKAMOTO, T , SUDO, Y , (2014) MOLECULAR AND EVOLUTIONARY ASPECTS OF MICROBIAL SENSORY RHODOPSINS.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1837. ISSUE 5. P. 562 -577 147 92% 5
3 HAUPTS, U , TITTOR, J , OESTERHELT, D , (1999) CLOSING IN ON BACTERIORHODOPSIN: PROGRESS IN UNDERSTANDING THE MOLECULE.ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE. VOL. 28. ISSUE . P. 367 -399 145 89% 399
4 LANYI, JK , VARO, G , (1995) THE PHOTOCYCLES OF BACTERIORHODOPSIN.ISRAEL JOURNAL OF CHEMISTRY. VOL. 35. ISSUE 3-4. P. 365 -385 196 98% 96
5 ERNST, OP , LODOWSKI, DT , ELSTNER, M , HEGEMANN, P , BROWN, LS , KANDORI, H , (2014) MICROBIAL AND ANIMAL RHODOPSINS: STRUCTURES, FUNCTIONS, AND MOLECULAR MECHANISMS.CHEMICAL REVIEWS. VOL. 114. ISSUE 1. P. 126 -163 195 37% 101
6 BALASHOV, SP , (2000) PROTONATION REACTIONS AND THEIR COUPLING IN BACTERIORHODOPSIN.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1460. ISSUE 1. P. 75 -94 157 99% 110
7 LANYI, JK , (2004) BACTERIORHODOPSIN.ANNUAL REVIEW OF PHYSIOLOGY. VOL. 66. ISSUE . P. 665-688 117 96% 296
8 LANYI, JK , (1993) PROTON TRANSLOCATION MECHANISM AND ENERGETICS IN THE LIGHT-DRIVEN PUMP BACTERIORHODOPSIN.BIOCHIMICA ET BIOPHYSICA ACTA. VOL. 1183. ISSUE 2. P. 241-261 153 95% 331
9 HAMPP, N , (2000) BACTERIORHODOPSIN AS A PHOTOCHROMIC RETINAL PROTEIN FOR OPTICAL MEMORIES.CHEMICAL REVIEWS. VOL. 100. ISSUE 5. P. 1755 -1776 113 91% 344
10 KAULEN, AD , (2000) ELECTROGENIC PROCESSES AND PROTEIN CONFORMATIONAL CHANGES ACCOMPANYING THE BACTERIORHODOPSIN PHOTOCYCLE.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1460. ISSUE 1. P. 204 -219 143 100% 25

Classes with closest relation at Level 1


Rank Class id link
1 3579 RHODOPSIN//RETINAL//BATHORHODOPSIN
2 9943 OPTOGENETICS//CHANNELRHODOPSIN//OPTICAL STIMULATION
3 20149 PHOTOACTIVE YELLOW PROTEIN//PHOTOACTIVE YELLOW PROTEIN PYP//XANTHOPSINS
4 35888 HIGH ENERGY ELECTRODES//BARRIERLESS CHARGE TRANSFER//INDUCTIVE MODEL OF THE ELECTRIC DOUBLE LAYER
5 30561 AMENAGEMENT SYLVICULTURE//AMUGBADU//BIOPHYS SYST MEMBRANAI GRP
6 4131 TRANSMEMBRANE HELIX//TRANSMEMBRANE HELICES//MEMBRANE PROTEIN
7 37493 DISSOLUTION HEAT//ACTIVATION THERMODYNAMIC QUANTITY//PIPERIDOLATE HYDROCHLORIDE
8 8570 PERIDININ//RAMAN SCATTERING CROSS SECTION//PERIDININ CHLOROPHYLL PROTEIN
9 4270 BACTERIAL CHEMOTAXIS//CHEMOTAXIS//CHEY
10 11901 GRAVITAXIS//GRAVIKINESIS//BLEPHARISMIN

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