Class information for:
Level 1: SHINE DALGARNO SEQUENCE//LEADERLESS MRNA//TRANSLATION INITIATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
9543 1145 36.7 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
371 2             RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY 17271
9543 1                   SHINE DALGARNO SEQUENCE//LEADERLESS MRNA//TRANSLATION INITIATION 1145

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SHINE DALGARNO SEQUENCE authKW 266139 2% 43% 23
2 LEADERLESS MRNA authKW 261327 1% 70% 14
3 TRANSLATION INITIATION authKW 254296 7% 11% 83
4 IF2 authKW 249990 1% 63% 15
5 BIOL MCA address 188058 2% 31% 23
6 RIBOSOMAL PROTEIN S1 authKW 180217 1% 48% 14
7 FMET TRNA authKW 170665 1% 80% 8
8 SD SEQUENCE authKW 170665 1% 80% 8
9 INITIATOR TRNA authKW 132401 1% 41% 12
10 FMET TRNA BINDING authKW 106667 0% 100% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 9170 72% 0% 824
2 Microbiology 1254 15% 0% 171
3 Genetics & Heredity 889 13% 0% 146
4 Biophysics 654 10% 0% 110
5 Cell Biology 468 12% 0% 139
6 Biotechnology & Applied Microbiology 237 8% 0% 86
7 Biochemical Research Methods 199 5% 0% 61
8 Biology 67 3% 0% 33
9 Mathematical & Computational Biology 18 1% 0% 12
10 Chemistry, Organic 3 3% 0% 29

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOL MCA 188058 2% 31% 23
2 DPT BIOTECNOL CELLULARI EMATOL 53334 0% 100% 2
3 ACIDES NUCLE BIOPHOTON FRE3207 26667 0% 100% 1
4 AG SPRINZL 26667 0% 100% 1
5 ANTENNE ICSN 26667 0% 100% 1
6 BIOMED ENGN INTERDEPARTAMENTAL PROGRAM 26667 0% 100% 1
7 BIOTECTN 26667 0% 100% 1
8 BOT VIROL GRP 26667 0% 100% 1
9 CNRS D1302 26667 0% 100% 1
10 DEP BIOTECNOL CELLULARI EMATOL 26667 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GENE 7882 7% 0% 76
2 DNA-A JOURNAL OF MOLECULAR & CELLULAR BIOLOGY 6168 1% 2% 10
3 BIOORGANICHESKAYA KHIMIYA 5494 2% 1% 26
4 NUCLEIC ACIDS RESEARCH 5017 8% 0% 87
5 JOURNAL OF MOLECULAR BIOLOGY 3911 5% 0% 59
6 MOLECULAR MICROBIOLOGY 3718 4% 0% 41
7 BIOCHIMIE 3704 3% 0% 29
8 JOURNAL OF BACTERIOLOGY 3212 6% 0% 64
9 EMBO JOURNAL 1267 3% 0% 29
10 RNA 1253 1% 0% 11

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SHINE DALGARNO SEQUENCE 266139 2% 43% 23 Search SHINE+DALGARNO+SEQUENCE Search SHINE+DALGARNO+SEQUENCE
2 LEADERLESS MRNA 261327 1% 70% 14 Search LEADERLESS+MRNA Search LEADERLESS+MRNA
3 TRANSLATION INITIATION 254296 7% 11% 83 Search TRANSLATION+INITIATION Search TRANSLATION+INITIATION
4 IF2 249990 1% 63% 15 Search IF2 Search IF2
5 RIBOSOMAL PROTEIN S1 180217 1% 48% 14 Search RIBOSOMAL+PROTEIN+S1 Search RIBOSOMAL+PROTEIN+S1
6 FMET TRNA 170665 1% 80% 8 Search FMET+TRNA Search FMET+TRNA
7 SD SEQUENCE 170665 1% 80% 8 Search SD+SEQUENCE Search SD+SEQUENCE
8 INITIATOR TRNA 132401 1% 41% 12 Search INITIATOR+TRNA Search INITIATOR+TRNA
9 FMET TRNA BINDING 106667 0% 100% 4 Search FMET+TRNA+BINDING Search FMET+TRNA+BINDING
10 INITIATION FACTOR 2 100384 1% 47% 8 Search INITIATION+FACTOR+2 Search INITIATION+FACTOR+2

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 GUALERZI, CO , PON, CL , (2015) INITIATION OF MRNA TRANSLATION IN BACTERIA: STRUCTURAL AND DYNAMIC ASPECTS.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 72. ISSUE 22. P. 4341 -4367 132 79% 6
2 LAURSEN, BS , SORENSEN, HP , MORTENSEN, KK , SPERLING-PETERSEN, HU , (2005) INITIATION OF PROTEIN SYNTHESIS IN BACTERIA.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 69. ISSUE 1. P. 101-+ 133 58% 255
3 MILON, P , RODNINA, MV , (2012) KINETIC CONTROL OF TRANSLATION INITIATION IN BACTERIA.CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. VOL. 47. ISSUE 4. P. 334-348 95 78% 30
4 GUALERZI, CO , FABBRETTI, A , BRANDI, L , MILON, P , PON, CL , (2010) ROLE OF THE INITIATION FACTORS IN MRNA START SITE SELECTION AND FMET-TRNA RECRUITMENT BY BACTERIAL RIBOSOMES.ISRAEL JOURNAL OF CHEMISTRY. VOL. 50. ISSUE 1. P. 80 -94 90 87% 4
5 GOYAL, A , BELARDINELLI, R , MARACCI, C , MILON, P , RODNINA, MV , (2015) DIRECTIONAL TRANSITION FROM INITIATION TO ELONGATION IN BACTERIAL TRANSLATION.NUCLEIC ACIDS RESEARCH. VOL. 43. ISSUE 22. P. - 49 72% 0
6 GUALERZI, CO , BRANDI, L , CASERTA, E , GAROFALO, C , LAMMI, M , LA TEANA, A , PETRELLI, D , SPURIO, R , TOMSIC, J , PON, CL , (2001) INITIATION FACTORS IN THE EARLY EVENTS OF MRNA TRANSLATION IN BACTERIA.COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY. VOL. 66. ISSUE . P. 363-376 54 74% 61
7 CABAN, K , GONZALEZ, RL , (2015) THE EMERGING ROLE OF RECTIFIED THERMAL FLUCTUATIONS IN INITIATOR AA-TRNA- AND START CODON SELECTION DURING TRANSLATION INITIATION.BIOCHIMIE. VOL. 114. ISSUE . P. 30 -38 46 63% 2
8 MACDOUGALL, DD , GONZALEZ, RL , (2015) TRANSLATION INITIATION FACTOR 3 REGULATES SWITCHING BETWEEN DIFFERENT MODES OF RIBOSOMAL SUBUNIT JOINING.JOURNAL OF MOLECULAR BIOLOGY. VOL. 427. ISSUE 9. P. 1801 -1818 38 67% 8
9 SIMONETTI, A , MARZI, S , JENNER, L , MYASNIKOV, A , ROMBY, P , YUSUPOVA, G , KLAHOLZ, BP , YUSUPOV, M , (2009) A STRUCTURAL VIEW OF TRANSLATION INITIATION IN BACTERIA.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 66. ISSUE 3. P. 423 -436 52 53% 61
10 BONI, IV , (2006) DIVERSE MOLECULAR MECHANISMS FOR TRANSLATION INITIATION - IN PROKARYOTES.MOLECULAR BIOLOGY. VOL. 40. ISSUE 4. P. 658-668 45 75% 8

Classes with closest relation at Level 1


Rank Class id link
1 23884 RIBOSOMAL PROTEIN L1//RPMG//L1 CONFORMATIONS
2 360 RIBOSOME//PEPTIDYL TRANSFERASE//AG RIBOSOMEN
3 31018 BACTERIOPHAGE T5//22 KD ZEIN MESSENGER RNAS//CHEMICOENZYMATIC SYNTHESIS
4 17163 Q BETA REPLICASE//RNA PHAGE//RNA BACTERIOPHAGES
5 37395 GLYCEROL CELL MEMBRANE LIPID PERMEABILITY GLYCEROL KINASE GLPF MUTANT//TETRACYCLINE ETHANOL OSMOLARITY ESCHERICHIA COLI TRANSPORT PASSIVE DIFFUSION//POLYPEPTIDE ELONGATION
6 13764 ELONGATION FACTOR TU//KIRROMYCIN//ELONGATION FACTOR TS
7 6760 RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME
8 6259 GENE REGULAT DEV//EIF3//EIF2
9 18779 TMRNA//TRANS TRANSLATION//SMPB
10 23535 PEPTIDE DEFORMYLASE//PEPTIDE DEFORMYLASE INHIBITORS//DEFORMYLASE

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