Class information for:
Level 1: PHOTOTROPIN//CHLOROPLAST MOVEMENT//LOV DOMAIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
7757 1331 44.3 79%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
7 3       PLANT SCIENCES//PLANT PHYSIOLOGY//ARABIDOPSIS 149859
2289 2             PHYTOCHROME//PHOTOTROPIN//PHOTOMORPHOGENESIS 4572
7757 1                   PHOTOTROPIN//CHLOROPLAST MOVEMENT//LOV DOMAIN 1331

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHOTOTROPIN authKW 1924933 8% 78% 108
2 CHLOROPLAST MOVEMENT authKW 1208633 5% 75% 70
3 LOV DOMAIN authKW 785466 3% 80% 43
4 BLUF authKW 504680 2% 100% 22
5 PHOTOTROPISM authKW 406734 5% 30% 60
6 BLUF DOMAIN authKW 367040 1% 100% 16
7 BLUE LIGHT authKW 358779 8% 15% 103
8 BIOL EXPT BIOPHYS address 337074 2% 64% 23
9 BIOL REGULAT PHOTOBIOL address 331245 1% 76% 19
10 LASER BIOSCI address 208544 1% 91% 10

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Plant Sciences 10529 39% 0% 523
2 Biochemistry & Molecular Biology 2457 37% 0% 498
3 Biophysics 1578 13% 0% 177
4 Cell Biology 879 15% 0% 197
5 Chemistry, Physical 322 13% 0% 177
6 Physics, Atomic, Molecular & Chemical 197 6% 0% 81
7 Biochemical Research Methods 114 4% 0% 54
8 Microbiology 6 2% 0% 33
9 Biotechnology & Applied Microbiology 4 2% 0% 32
10 Microscopy 4 0% 0% 4

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOL EXPT BIOPHYS 337074 2% 64% 23
2 BIOL REGULAT PHOTOBIOL 331245 1% 76% 19
3 LASER BIOSCI 208544 1% 91% 10
4 LASER BIOCHEM 185812 1% 90% 9
5 EXPT ANGEW PHYS 2 141074 2% 27% 23
6 CHEM PHYS BIOPHYS CHEM 52431 0% 57% 4
7 FREIBURG BIOSYST ANAL ZBSA 52431 0% 57% 4
8 LASER S FAST REACT 45880 0% 100% 2
9 ZBSA BIOSYST ANAL 45880 0% 100% 2
10 UNIT PROC COMBINED CIRCUIT 44952 1% 28% 7

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PLANT AND CELL PHYSIOLOGY 15738 5% 1% 69
2 JOURNAL OF PLANT RESEARCH 11685 2% 2% 29
3 PHOTOCHEMISTRY AND PHOTOBIOLOGY 10141 5% 1% 61
4 PLANTA 9027 4% 1% 59
5 ACS SYNTHETIC BIOLOGY 6935 1% 2% 13
6 PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 6124 2% 1% 27
7 PLANT PHYSIOLOGY 5882 6% 0% 74
8 PLANT CELL AND ENVIRONMENT 3051 2% 1% 26
9 BIOCHEMISTRY 2322 6% 0% 75
10 PLANT CELL 1826 2% 0% 22

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PHOTOTROPIN 1924933 8% 78% 108 Search PHOTOTROPIN Search PHOTOTROPIN
2 CHLOROPLAST MOVEMENT 1208633 5% 75% 70 Search CHLOROPLAST+MOVEMENT Search CHLOROPLAST+MOVEMENT
3 LOV DOMAIN 785466 3% 80% 43 Search LOV+DOMAIN Search LOV+DOMAIN
4 BLUF 504680 2% 100% 22 Search BLUF Search BLUF
5 PHOTOTROPISM 406734 5% 30% 60 Search PHOTOTROPISM Search PHOTOTROPISM
6 BLUF DOMAIN 367040 1% 100% 16 Search BLUF+DOMAIN Search BLUF+DOMAIN
7 BLUE LIGHT 358779 8% 15% 103 Search BLUE+LIGHT Search BLUE+LIGHT
8 LOV 198507 1% 58% 15 Search LOV Search LOV
9 LIGHT OXYGEN VOLTAGE 183520 1% 100% 8 Search LIGHT+OXYGEN+VOLTAGE Search LIGHT+OXYGEN+VOLTAGE
10 PHOTO CYCLE 146813 1% 80% 8 Search PHOTO+CYCLE Search PHOTO+CYCLE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 LOSI, A , GARTNER, W , (2011) OLD CHROMOPHORES, NEW PHOTOACTIVATION PARADIGMS, TRENDY APPLICATIONS: FLAVINS IN BLUE LIGHT-SENSING PHOTORECEPTORS.PHOTOCHEMISTRY AND PHOTOBIOLOGY. VOL. 87. ISSUE 3. P. 491 -510 158 73% 60
2 WADA, M , (2016) CHLOROPLAST AND NUCLEAR PHOTORELOCATION MOVEMENTS.PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES. VOL. 92. ISSUE 9. P. 387 -411 103 82% 0
3 KONG, SG , WADA, M , (2014) RECENT ADVANCES IN UNDERSTANDING THE MOLECULAR MECHANISM OF CHLOROPLAST PHOTORELOCATION MOVEMENT.BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS. VOL. 1837. ISSUE 4. P. 522-530 86 87% 15
4 CHRISTIE, JM , GAWTHORNE, J , YOUNG, G , FRASER, NJ , ROE, AJ , (2012) LOV TO BLUF: FLAVOPROTEIN CONTRIBUTIONS TO THE OPTOGENETIC TOOLKIT.MOLECULAR PLANT. VOL. 5. ISSUE 3. P. 533-544 100 76% 35
5 KONG, SG , WADA, M , (2016) MOLECULAR BASIS OF CHLOROPLAST PHOTORELOCATION MOVEMENT.JOURNAL OF PLANT RESEARCH. VOL. 129. ISSUE 2. P. 159 -166 72 96% 2
6 BANAS, AK , AGGARWAL, C , LABUZ, J , SZTATELMAN, O , GABRYS, H , (2012) BLUE LIGHT SIGNALLING IN CHLOROPLAST MOVEMENTS.JOURNAL OF EXPERIMENTAL BOTANY. VOL. 63. ISSUE 4. P. 1559 -1574 91 86% 21
7 CHRISTIE, JM , (2007) PHOTOTROPIN BLUE-LIGHT RECEPTORS.ANNUAL REVIEW OF PLANT BIOLOGY. VOL. 58. ISSUE . P. 21 -45 94 66% 298
8 HERROU, J , CROSSON, S , (2011) FUNCTION, STRUCTURE AND MECHANISM OF BACTERIAL PHOTOSENSORY LOV PROTEINS.NATURE REVIEWS MICROBIOLOGY. VOL. 9. ISSUE 10. P. 713 -723 81 69% 71
9 CONRAD, KS , MANAHAN, CC , CRANE, BR , (2014) PHOTOCHEMISTRY OF FLAVOPROTEIN LIGHT SENSORS.NATURE CHEMICAL BIOLOGY. VOL. 10. ISSUE 10. P. 801 -809 74 69% 30
10 KOMATSU, A , TERAI, M , ISHIZAKI, K , SUETSUGU, N , TSUBOI, H , NISHIHAMA, R , YAMATO, KT , WADA, M , KOHCHI, T , (2014) PHOTOTROPIN ENCODED BY A SINGLE-COPY GENE MEDIATES CHLOROPLAST PHOTORELOCATION MOVEMENTS IN THE LIVERWORT MARCHANTIA POLYMORPHA.PLANT PHYSIOLOGY. VOL. 166. ISSUE 1. P. 411 -U598 69 84% 6

Classes with closest relation at Level 1


Rank Class id link
1 1238 PHYTOCHROME//PHOTOMORPHOGENESIS//PHYTOCHROME A
2 32370 LEPIDIMOIDE//RAPHANUSANIN//BRUINSMA HASEGAWA THEORY
3 12931 PHOTOLYASE//DNA PHOTOLYASE//PHOTOCATALYSE BIOHYDROGENE
4 20149 PHOTOACTIVE YELLOW PROTEIN//PHOTOACTIVE YELLOW PROTEIN PYP//XANTHOPSINS
5 26002 LIGHT GRADIENTS//LEAF OPTICS//BIFACIAL LEAVES
6 13612 FLAVODOXIN//ALLOXAZINE//UNITAT QUIM ORGAN
7 18214 TRISPORIC ACID//PHYCOMYCES//PHYCOMYCES BLAKESLEEANUS
8 22210 PROTEIN KNOCKDOWN//PROTACS//CHEMICAL INDUCERS OF DIMERIZATION
9 4386 GRAVITROPISM//HYDROTROPISM//STATOCYTE
10 17297 FERN GAMETOPHYTE//CERATOPTERIS//GAMETOPHYTE

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