Class information for:
Level 1: HFQ//SRNA//RYHB

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
7121 1403 56.4 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
371 2             RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY 17271
7121 1                   HFQ//SRNA//RYHB 1403

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 HFQ authKW 2509058 10% 82% 140
2 SRNA authKW 1164673 6% 60% 89
3 RYHB authKW 411151 2% 82% 23
4 RNA BIOL GRP address 381924 3% 47% 37
5 RIBOREGULATION authKW 341573 1% 83% 19
6 SMALL RNA authKW 336760 7% 15% 102
7 SRNAS authKW 278556 1% 80% 16
8 DSRA authKW 251812 1% 64% 18
9 CSRA authKW 242218 1% 70% 16
10 SMALL REGULATORY RNA authKW 207368 1% 53% 18

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 15657 44% 0% 619
2 Biochemistry & Molecular Biology 6077 54% 0% 763
3 Genetics & Heredity 747 11% 0% 152
4 Biotechnology & Applied Microbiology 546 10% 0% 136
5 Cell Biology 230 9% 0% 120
6 Mathematical & Computational Biology 150 2% 0% 31
7 Biochemical Research Methods 121 4% 0% 57
8 Developmental Biology 117 2% 0% 31
9 Biophysics 96 4% 0% 58
10 Infectious Diseases 25 2% 0% 29

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA BIOL GRP 381924 3% 47% 37
2 MOL INFECT BIOL 177171 4% 15% 56
3 INFECT DIS ZINF 132323 1% 41% 15
4 AG BAKTERIENGENET 82453 1% 32% 12
5 UP EA2311 78341 0% 60% 6
6 GRP ECOL GENET RIZOSFERA 71084 0% 47% 7
7 MICROBIOL IMMUNOBIOL GENET 66146 1% 20% 15
8 FRE 3132 65288 0% 100% 3
9 ZENTRUM INFEKT FOR ZINF 65288 0% 100% 3
10 CELL MOL DEV BIOL BIOPHYS PROGRAM 58031 0% 67% 4

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA BIOLOGY 103256 5% 7% 66
2 MOLECULAR MICROBIOLOGY 24164 8% 1% 115
3 CURRENT OPINION IN MICROBIOLOGY 17145 3% 2% 38
4 RNA 9299 2% 1% 33
5 JOURNAL OF BACTERIOLOGY 8875 8% 0% 117
6 NUCLEIC ACIDS RESEARCH 8633 9% 0% 126
7 BMC GENOMICS 4747 3% 0% 46
8 FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 3938 1% 2% 12
9 FUTURE MICROBIOLOGY 2165 1% 1% 10
10 BMC MICROBIOLOGY 2025 1% 1% 17

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 HFQ 2509058 10% 82% 140 Search HFQ Search HFQ
2 SRNA 1164673 6% 60% 89 Search SRNA Search SRNA
3 RYHB 411151 2% 82% 23 Search RYHB Search RYHB
4 RIBOREGULATION 341573 1% 83% 19 Search RIBOREGULATION Search RIBOREGULATION
5 SMALL RNA 336760 7% 15% 102 Search SMALL+RNA Search SMALL+RNA
6 SRNAS 278556 1% 80% 16 Search SRNAS Search SRNAS
7 DSRA 251812 1% 64% 18 Search DSRA Search DSRA
8 CSRA 242218 1% 70% 16 Search CSRA Search CSRA
9 SMALL REGULATORY RNA 207368 1% 53% 18 Search SMALL+REGULATORY+RNA Search SMALL+REGULATORY+RNA
10 6S RNA 195858 1% 75% 12 Search 6S+RNA Search 6S+RNA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 WAGNER, EGH , ROMBY, P , (2015) SMALL RNAS IN BACTERIA AND ARCHAEA: WHO THEY ARE, WHAT THEY DO, AND HOW THEY DO IT.ADVANCES IN GENETICS, VOL 90. VOL. 90. ISSUE . P. 133 -208 254 67% 35
2 VOGEL, J , LUISI, BF , (2011) HFQ AND ITS CONSTELLATION OF RNA.NATURE REVIEWS MICROBIOLOGY. VOL. 9. ISSUE 8. P. 578 -589 115 79% 317
3 PAPENFORT, K , VANDERPOOL, CK , (2015) TARGET ACTIVATION BY REGULATORY RNAS IN BACTERIA.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 3. P. 362 -378 144 73% 22
4 SOBRERO, P , VALVERDE, C , (2012) THE BACTERIAL PROTEIN HFQ: MUCH MORE THAN A MERE RNA-BINDING FACTOR.CRITICAL REVIEWS IN MICROBIOLOGY. VOL. 38. ISSUE 4. P. 276-299 153 78% 44
5 STORZ, G , VOGEL, J , WASSARMAN, KM , (2011) REGULATION BY SMALL RNAS IN BACTERIA: EXPANDING FRONTIERS.MOLECULAR CELL. VOL. 43. ISSUE 6. P. 880-891 88 83% 350
6 UPDEGROVE, TB , SHABALINA, SA , STORZ, G , (2015) HOW DO BASE-PAIRING SMALL RNAS EVOLVE?.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 3. P. 379 -391 98 92% 15
7 GOTTESMAN, S , STORZ, G , (2011) BACTERIAL SMALL RNA REGULATORS: VERSATILE ROLES AND RAPIDLY EVOLVING VARIATIONS.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 3. ISSUE 12. P. - 108 72% 84
8 HOLMQVIST, E , WRIGHT, PR , LI, L , BISCHLER, T , BARQUIST, L , REINHARDT, R , BACKOFEN, R , VOGEL, J , (2016) GLOBAL RNA RECOGNITION PATTERNS OF POST-TRANSCRIPTIONAL REGULATORS HFQ AND CSRA REVEALED BY UV CROSSLINKING IN VIVO.EMBO JOURNAL. VOL. 35. ISSUE 9. P. 991 -1011 91 72% 5
9 WATERS, LS , STORZ, G , (2009) REGULATORY RNAS IN BACTERIA.CELL. VOL. 136. ISSUE 4. P. 615-628 74 64% 667
10 FELICIANO, JR , GRILO, AM , GUERREIRO, SI , SOUSA, SA , LEITAO, JH , (2016) HFQ: A MULTIFACETED RNA CHAPERONE INVOLVED IN VIRULENCE.FUTURE MICROBIOLOGY. VOL. 11. ISSUE 1. P. 137 -151 98 74% 2

Classes with closest relation at Level 1


Rank Class id link
1 6760 RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME
2 13486 RPOS//CURLI//UVI31
3 12082 RIBOSWITCH//CANC UK NUCLE ACID STRUCT GRP//RNA SWITCH
4 10566 TOXIN ANTITOXIN SYSTEM//TOXIN ANTITOXIN//POST SEGREGATIONAL KILLING
5 2673 RNA SECONDARY STRUCTURE//RNA SECONDARY STRUCTURE PREDICTION//PSEUDOKNOT
6 6304 C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP
7 15103 HTRA1//HTRA//HTRA2
8 7584 FERRIC UPTAKE REGULATOR//FUR//NIKR
9 29317 AOGEN//BRADYTROPHIC PHENOCOPY//CONTROL OF TRANSGENE EXPRESSION
10 18779 TMRNA//TRANS TRANSLATION//SMPB

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