Class information for:
Level 1: YERSINIA//TYPE III SECRETION//MICROBIAL PATHOGENESIS UNIT

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
4452 1782 48.5 85%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
368 3       THROMBOTIC THROMBOCYTOPENIC PURPURA//HEMOLYTIC UREMIC SYNDROME//SHIGA TOXIN 33921
1382 2             YERSINIA PESTIS//YERSINIA ENTEROCOLITICA//SHIGELLA 8154
4452 1                   YERSINIA//TYPE III SECRETION//MICROBIAL PATHOGENESIS UNIT 1782

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 YERSINIA authKW 386447 5% 25% 90
2 TYPE III SECRETION authKW 327702 4% 26% 75
3 MICROBIAL PATHOGENESIS UNIT address 202769 2% 36% 33
4 YOPS authKW 190696 1% 70% 16
5 YOPM authKW 126163 1% 82% 9
6 TYPE III SECRETION SYSTEM authKW 124422 3% 15% 47
7 INJECTISOME authKW 122378 1% 71% 10
8 INVASIN authKW 116134 1% 34% 20
9 SIPD authKW 104942 0% 88% 7
10 YOPE authKW 104942 0% 88% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 26918 51% 0% 910
2 Infectious Diseases 6767 19% 0% 335
3 Immunology 6557 30% 0% 532
4 Biochemistry & Molecular Biology 2227 32% 0% 566
5 Virology 549 5% 0% 84
6 Cell Biology 430 10% 0% 176
7 Parasitiology 371 3% 0% 55
8 Biophysics 106 4% 0% 70
9 Biochemical Research Methods 66 3% 0% 54
10 Medicine, Research & Experimental 46 3% 0% 56

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MICROBIAL PATHOGENESIS UNIT 202769 2% 36% 33
2 MED COUNTERMEASU 68511 1% 25% 16
3 MAX VON PETTENKOFER HYG MED MICROBIOL 56225 2% 11% 30
4 BACTERIOL MOL 51687 1% 23% 13
5 UCMR 50780 1% 23% 13
6 ABT MOL INFEKT BIOL 45687 0% 67% 4
7 UMEA MICROBIAL 43339 1% 14% 18
8 CHRISTIAN DE DUVE CELLULAR PATHOL 35110 1% 11% 19
9 JR GRP 6 34267 0% 100% 2
10 KU INC 34267 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INFECTION AND IMMUNITY 41635 14% 1% 254
2 MOLECULAR MICROBIOLOGY 27780 8% 1% 139
3 CELLULAR MICROBIOLOGY 12281 2% 2% 41
4 JOURNAL OF BACTERIOLOGY 10725 8% 0% 145
5 INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY 6388 1% 2% 23
6 MICROBIAL PATHOGENESIS 5680 2% 1% 31
7 PLOS PATHOGENS 5445 2% 1% 42
8 ZHURNAL MIKROBIOLOGII EPIDEMIOLOGII I IMMUNOBIOLOGII 3960 2% 1% 27
9 FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 3096 1% 2% 12
10 CURRENT OPINION IN MICROBIOLOGY 3006 1% 1% 18

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 YERSINIA 386447 5% 25% 90 Search YERSINIA Search YERSINIA
2 TYPE III SECRETION 327702 4% 26% 75 Search TYPE+III+SECRETION Search TYPE+III+SECRETION
3 YOPS 190696 1% 70% 16 Search YOPS Search YOPS
4 YOPM 126163 1% 82% 9 Search YOPM Search YOPM
5 TYPE III SECRETION SYSTEM 124422 3% 15% 47 Search TYPE+III+SECRETION+SYSTEM Search TYPE+III+SECRETION+SYSTEM
6 INJECTISOME 122378 1% 71% 10 Search INJECTISOME Search INJECTISOME
7 INVASIN 116134 1% 34% 20 Search INVASIN Search INVASIN
8 SIPD 104942 0% 88% 7 Search SIPD Search SIPD
9 YOPE 104942 0% 88% 7 Search YOPE Search YOPE
10 YERSINIA ENTEROCOLITICA 103620 3% 10% 59 Search YERSINIA+ENTEROCOLITICA Search YERSINIA+ENTEROCOLITICA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 BUTTNER, D , (2012) PROTEIN EXPORT ACCORDING TO SCHEDULE: ARCHITECTURE, ASSEMBLY, AND REGULATION OF TYPE III SECRETION SYSTEMS FROM PLANT- AND ANIMAL-PATHOGENIC BACTERIA.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 76. ISSUE 2. P. 262-310 278 45% 116
2 DEWOODY, RS , MERRITT, PM , MARKETON, MM , (2013) REGULATION OF THE YERSINIA TYPE III SECRETION SYSTEM: TRAFFIC CONTROL.FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. VOL. 3. ISSUE . P. - 123 85% 26
3 GALAN, JE , LARA-TEJERO, M , MARLOVITS, TC , WAGNER, S , (2014) BACTERIAL TYPE III SECRETION SYSTEMS: SPECIALIZED NANOMACHINES FOR PROTEIN DELIVERY INTO TARGET CELLS.ANNUAL REVIEW OF MICROBIOLOGY, VOL 68. VOL. 68. ISSUE . P. 415 -438 102 71% 71
4 CORNELIS, GR , BOLAND, A , BOYD, AP , GEUIJEN, C , IRIARTE, M , NEYT, C , SORY, MP , STAINIER, I , (1998) THE VIRULENCE PLASMID OF YERSINIA, AN ANTIHOST GENOME.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 62. ISSUE 4. P. 1315 -+ 195 53% 538
5 BURKINSHAW, BJ , STRYNADKA, NCJ , (2014) ASSEMBLY AND STRUCTURE OF THE T3SS.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1649 -1663 131 63% 26
6 CORNELIS, GR , (2006) THE TYPE III SECRETION INJECTISOME.NATURE REVIEWS MICROBIOLOGY. VOL. 4. ISSUE 11. P. 811-825 94 67% 576
7 CORNELIS, GR , (2002) THE YERSINIA YSC-YOP 'TYPE III' WEAPONRY.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 3. ISSUE 10. P. 742-752 99 89% 277
8 DIEPOLD, A , WAGNER, S , (2014) ASSEMBLY OF THE BACTERIAL TYPE III SECRETION MACHINERY.FEMS MICROBIOLOGY REVIEWS. VOL. 38. ISSUE 4. P. 802 -822 127 58% 22
9 CHATTERJEE, S , CHAUDHURY, S , MCSHAN, AC , KAUR, K , DE GUZMAN, RN , (2013) STRUCTURE AND BIOPHYSICS OF TYPE III SECRETION IN BACTERIA.BIOCHEMISTRY. VOL. 52. ISSUE 15. P. 2508 -2517 91 75% 32
10 GHOSH, P , (2004) PROCESS OF PROTEIN TRANSPORT BY THE TYPE III SECRETION SYSTEM.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 68. ISSUE 4. P. 771-+ 135 54% 254

Classes with closest relation at Level 1


Rank Class id link
1 4107 YERSINIA PESTIS//PLAGUE//PNEUMONIC PLAGUE
2 4010 YERSINIA ENTEROCOLITICA//YERSINIA PSEUDOTUBERCULOSIS//YERSINIOSIS
3 8282 BACTERIAL FLAGELLUM//DYNAM NANOMACHINE PROJECT//FLAGELLAR MOTOR
4 7701 UNITE PATHOGENIE MICROBIENNE MOL//SHIGELLA//SHIGELLA FLEXNERI
5 1627 SALMONELLA//SALMONELLA CONTAINING VACUOLE//D BIOL
6 10314 EXOU//EXOS//EXOENZYME S
7 3976 MOLECULAR PLANT-MICROBE INTERACTIONS//HARPIN//XANTHOMONAS
8 1884 ENTEROPATHOGENIC ESCHERICHIA COLI//EPEC//ENTEROAGGREGATIVE ESCHERICHIA COLI
9 12199 TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY
10 23096 CNF1//U452//ESCHERICHIA COLI K1

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