Class information for:
Level 1: MSAP//RDDM//RNA DIRECTED DNA METHYLATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
4373 1796 53.5 89%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
7 3       PLANT SCIENCES//PLANT PHYSIOLOGY//ARABIDOPSIS 149859
135 2             PLANT SCIENCES//ARABIDOPSIS//PLANT CELL 23819
4373 1                   MSAP//RDDM//RNA DIRECTED DNA METHYLATION 1796

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MSAP authKW 943649 4% 76% 73
2 RDDM authKW 418888 2% 79% 31
3 RNA DIRECTED DNA METHYLATION authKW 405941 2% 60% 40
4 DNA METHYLATION authKW 383791 26% 5% 467
5 GREGOR MENDEL MOL PLANT BIOL address 243751 2% 34% 42
6 EPIALLELE authKW 214185 1% 60% 21
7 DDM1 authKW 207232 1% 76% 16
8 TRANSCRIPTIONAL GENE SILENCING authKW 204666 2% 35% 34
9 CYTOSINE METHYLATION authKW 179507 2% 27% 39
10 EPIGENETIC VARIATION authKW 169981 1% 50% 20

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Plant Sciences 18319 44% 0% 797
2 Genetics & Heredity 11385 33% 0% 601
3 Biochemistry & Molecular Biology 3757 39% 0% 709
4 Cell Biology 3440 24% 0% 423
5 Evolutionary Biology 611 4% 0% 76
6 Horticulture 394 3% 0% 48
7 Biotechnology & Applied Microbiology 337 7% 0% 130
8 Developmental Biology 247 3% 0% 49
9 Agronomy 111 3% 0% 49
10 Biology 106 3% 0% 52

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GREGOR MENDEL MOL PLANT BIOL 243751 2% 34% 42
2 SHANGHAI PLANT ST S BIOL 105351 2% 20% 31
3 INTEGRATED GENET 79911 2% 17% 27
4 LIFE SCI CORE CURRICULUM 76498 0% 75% 6
5 MOL EPIGENET MOE 70161 1% 24% 17
6 MOL CELL DEV BIOL 67289 5% 5% 86
7 PLANT EPIGENET UNIT 60712 0% 71% 5
8 DPTO BOS 43834 0% 37% 7
9 UMR232 38249 0% 75% 3
10 PLANT MOL EPIGENET 38243 0% 38% 6

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CURRENT OPINION IN PLANT BIOLOGY 23202 3% 3% 49
2 PLOS GENETICS 11483 4% 1% 64
3 PLANT JOURNAL 7565 3% 1% 57
4 PLANT CELL 6776 3% 1% 49
5 MOLECULAR PLANT 6356 1% 2% 19
6 NATURE PLANTS 6310 0% 5% 8
7 FRONTIERS IN PLANT SCIENCE 4156 2% 1% 35
8 GENETICS 4094 3% 0% 56
9 PLANT MOLECULAR BIOLOGY 3054 2% 1% 35
10 PLANT CELL REPORTS 2616 2% 1% 29

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MSAP 943649 4% 76% 73 Search MSAP Search MSAP
2 RDDM 418888 2% 79% 31 Search RDDM Search RDDM
3 RNA DIRECTED DNA METHYLATION 405941 2% 60% 40 Search RNA+DIRECTED+DNA+METHYLATION Search RNA+DIRECTED+DNA+METHYLATION
4 DNA METHYLATION 383791 26% 5% 467 Search DNA+METHYLATION Search DNA+METHYLATION
5 EPIALLELE 214185 1% 60% 21 Search EPIALLELE Search EPIALLELE
6 DDM1 207232 1% 76% 16 Search DDM1 Search DDM1
7 TRANSCRIPTIONAL GENE SILENCING 204666 2% 35% 34 Search TRANSCRIPTIONAL+GENE+SILENCING Search TRANSCRIPTIONAL+GENE+SILENCING
8 CYTOSINE METHYLATION 179507 2% 27% 39 Search CYTOSINE+METHYLATION Search CYTOSINE+METHYLATION
9 EPIGENETIC VARIATION 169981 1% 50% 20 Search EPIGENETIC+VARIATION Search EPIGENETIC+VARIATION
10 METHYLATION SENSITIVE AMPLIFIED POLYMORPHISM MSAP 154545 1% 91% 10 Search METHYLATION+SENSITIVE+AMPLIFIED+POLYMORPHISM+MSAP Search METHYLATION+SENSITIVE+AMPLIFIED+POLYMORPHISM+MSAP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 MATZKE, MA , MOSHER, RA , (2014) RNA-DIRECTED DNA METHYLATION: AN EPIGENETIC PATHWAY OF INCREASING COMPLEXITY.NATURE REVIEWS GENETICS. VOL. 15. ISSUE 6. P. 394 -408 111 74% 185
2 QUADRANA, L , COLOT, V , (2016) PLANT TRANSGENERATIONAL EPIGENETICS.ANNUAL REVIEW OF GENETICS, VOL 50. VOL. 50. ISSUE . P. 467 -491 127 85% 0
3 KUMAR, S , KUMARI, R , SHARMA, V , SHARMA, V , (2013) ROLES, AND ESTABLISHMENT, MAINTENANCE AND ERASING OF THE EPIGENETIC CYTOSINE METHYLATION MARKS IN PLANTS.JOURNAL OF GENETICS. VOL. 92. ISSUE 3. P. 629 -666 178 63% 2
4 MATZKE, MA , KANNO, T , MATZKE, AJM , (2015) RNA-DIRECTED DNA METHYLATION: THE EVOLUTION OF A COMPLEX EPIGENETIC PATHWAY IN FLOWERING PLANTS.ANNUAL REVIEW OF PLANT BIOLOGY, VOL 66. VOL. 66. ISSUE . P. 243 -267 85 62% 34
5 WENDTE, JM , PIKAARD, CS , (2017) THE RNAS OF RNA-DIRECTED DNA METHYLATION.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1860. ISSUE 1. P. 140 -148 87 84% 0
6 ZHOU, M , LAW, JA , (2015) RNA POL IV AND V IN GENE SILENCING: REBEL POLYMERASES EVOLVING AWAY FROM POL II'S RULES.CURRENT OPINION IN PLANT BIOLOGY. VOL. 27. ISSUE . P. 154 -164 85 84% 2
7 EICHTEN, SR , SCHMITZ, RJ , SPRINGER, NM , (2014) EPIGENETICS: BEYOND CHROMATIN MODIFICATIONS AND COMPLEX GENETIC REGULATION.PLANT PHYSIOLOGY. VOL. 165. ISSUE 3. P. 933 -947 113 58% 14
8 RIGAL, M , BECKER, C , PELISSIER, T , POGORELCNIK, R , DEVOS, J , IKEDA, Y , WEIGEL, D , MATHIEU, O , (2016) EPIGENOME CONFRONTATION TRIGGERS IMMEDIATE REPROGRAMMING OF DNA METHYLATION AND TRANSPOSON SILENCING IN ARABIDOPSIS THALIANA F1 EPIHYBRIDS.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 113. ISSUE 14. P. E2083 -E2092 57 89% 5
9 HAUSER, MT , AUFSATZ, W , JONAK, C , LUSCHNIG, C , (2011) TRANSGENERATIONAL EPIGENETIC INHERITANCE IN PLANTS.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1809. ISSUE 8. P. 459 -468 110 53% 86
10 VIDALIS, A , ZIVKOVIC, D , WARDENAAR, R , ROQUIS, D , TELLIER, A , JOHANNES, F , (2016) METHYLOME EVOLUTION IN PLANTS.GENOME BIOLOGY. VOL. 17. ISSUE . P. - 89 75% 0

Classes with closest relation at Level 1


Rank Class id link
1 7396 FLOWERING LOCUS C//FLC//VERNALIZATION
2 15162 ENDOSPERM//TRANSFER CELLS//WALL INGROWTHS
3 5265 RNA SILENCING//POST TRANSCRIPTIONAL GENE SILENCING//VIRUS INDUCED GENE SILENCING
4 6470 RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS
5 18199 TRANSGENERATIONAL//METASTABLE EPIALLELE//TRANSGENERATIONAL INHERITANCE
6 1855 MIR156//MICRORNA//MIRNA
7 1631 5 HYDROXYMETHYLCYTOSINE//DNA METHYLATION//5HMC
8 6967 POLYPLOIDY//ALLOPOLYPLOIDY//AUTOPOLYPLOIDY
9 7239 TRANSPOSON TAGGING//AC DS//GENE TAGGING
10 4391 DE NOVO METHYLATION//MYF 3//DNA METHYLATION

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