Class information for:
Level 1: SORTASE//SORTASE A//SRTA

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
18334 556 44.5 89%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
605 3       TOURETTE SYNDROME//NECROTIZING FASCIITIS//STREPTOCOCCUS PYOGENES 14320
3413 2             STREPTOCOCCUS SUIS//SORTASE//SORTASE A 1591
18334 1                   SORTASE//SORTASE A//SRTA 556

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SORTASE authKW 2442389 12% 68% 65
2 SORTASE A authKW 2056852 10% 71% 53
3 SRTA authKW 319522 1% 73% 8
4 BACKBONE PROTEIN authKW 274593 1% 100% 5
5 SORTASE MEDIATED LIGATION authKW 219674 1% 100% 4
6 LPXTG authKW 152547 1% 56% 5
7 COMM MICROBIOL address 141609 3% 18% 14
8 ISOPEPTIDE BONDS authKW 124809 1% 45% 5
9 LPXTG MOTIF authKW 123559 1% 38% 6
10 BACTERIAL PILUS authKW 109837 0% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 2336 28% 0% 154
2 Biochemistry & Molecular Biology 1979 50% 0% 277
3 Biochemical Research Methods 448 10% 0% 57
4 Biophysics 225 8% 0% 46
5 Infectious Diseases 182 6% 0% 34
6 Chemistry, Medicinal 172 6% 0% 33
7 Chemistry, Multidisciplinary 122 12% 0% 69
8 Biotechnology & Applied Microbiology 110 7% 0% 41
9 Immunology 74 7% 0% 41
10 Chemistry, Organic 68 7% 0% 37

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 COMM MICROBIOL 141609 3% 18% 14
2 COMP AIDED DRUG DESIGN MOL MODELING 79074 1% 24% 6
3 ABT PEPTIDCHEMIE BIOCHEM 54919 0% 100% 1
4 ADV PROTEIN S 54919 0% 100% 1
5 BIOL STRUCT JEAN PIERIE EBELUMR 5075 54919 0% 100% 1
6 BIOL STRUCT JEAN PIERRE EBELBACTERIAL PATHO 54919 0% 100% 1
7 CEACNRSUJFPSB 54919 0% 100% 1
8 CELLULAR MICROBIOL BIOINFORMAT 54919 0% 100% 1
9 CENTYREX 54919 0% 100% 1
10 CHEM ORGAN BIOORGAN CHEM OCIII 54919 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR MICROBIOLOGY 3095 5% 0% 26
2 TRENDS IN MICROBIOLOGY 1947 1% 0% 8
3 JOURNAL OF BACTERIOLOGY 1656 6% 0% 32
4 BIOCONJUGATE CHEMISTRY 1569 2% 0% 12
5 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 870 1% 0% 7
6 NATURE PROTOCOLS 863 1% 0% 6
7 INFECTION AND IMMUNITY 798 4% 0% 20
8 CURRENT CONTENTS/PHYSICAL CHEMICAL & EARTH SCIENCES 736 0% 1% 2
9 CURRENT CONTENTS/ENGINEERING TECHNOLOGY & APPLIED SCIENCES 731 0% 1% 2
10 ANTIBIOTIQUES 644 0% 1% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SORTASE 2442389 12% 68% 65 Search SORTASE Search SORTASE
2 SORTASE A 2056852 10% 71% 53 Search SORTASE+A Search SORTASE+A
3 SRTA 319522 1% 73% 8 Search SRTA Search SRTA
4 BACKBONE PROTEIN 274593 1% 100% 5 Search BACKBONE+PROTEIN Search BACKBONE+PROTEIN
5 SORTASE MEDIATED LIGATION 219674 1% 100% 4 Search SORTASE+MEDIATED+LIGATION Search SORTASE+MEDIATED+LIGATION
6 LPXTG 152547 1% 56% 5 Search LPXTG Search LPXTG
7 ISOPEPTIDE BONDS 124809 1% 45% 5 Search ISOPEPTIDE+BONDS Search ISOPEPTIDE+BONDS
8 LPXTG MOTIF 123559 1% 38% 6 Search LPXTG+MOTIF Search LPXTG+MOTIF
9 BACTERIAL PILUS 109837 0% 100% 2 Search BACTERIAL+PILUS Search BACTERIAL+PILUS
10 CNA B DOMAIN 109837 0% 100% 2 Search CNA+B+DOMAIN Search CNA+B+DOMAIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BRADSHAW, WJ , DAVIES, AH , CHAMBERS, CJ , ROBERTS, AK , SHONE, CC , ACHARYA, KR , (2015) MOLECULAR FEATURES OF THE SORTASE ENZYME FAMILY.FEBS JOURNAL. VOL. 282. ISSUE 11. P. 2097 -2114 87 85% 11
2 SPIRIG, T , WEINER, EM , CLUBB, RT , (2011) SORTASE ENZYMES IN GRAM-POSITIVE BACTERIA.MOLECULAR MICROBIOLOGY. VOL. 82. ISSUE 5. P. 1044-1059 85 88% 68
3 POPP, MWL , PLOEGH, HL , (2011) MAKING AND BREAKING PEPTIDE BONDS: PROTEIN ENGINEERING USING SORTASE.ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. VOL. 50. ISSUE 22. P. 5024 -5032 79 87% 83
4 RITZEFELD, M , (2014) SORTAGGING: A ROBUST AND EFFICIENT CHEMOENZYMATIC LIGATION STRATEGY.CHEMISTRY-A EUROPEAN JOURNAL. VOL. 20. ISSUE 28. P. 8516 -8529 93 77% 12
5 CLANCY, KW , MELVIN, JA , MCCAFFERTY, DG , (2010) SORTASE TRANSPEPTIDASES: INSIGHTS INTO MECHANISM, SUBSTRATE SPECIFICITY, AND INHIBITION.BIOPOLYMERS. VOL. 94. ISSUE 4. P. 385-396 70 82% 61
6 HENDRICKX, APA , BUDZIK, JM , OH, SY , SCHNEEWIND, O , (2011) ARCHITECTS AT THE BACTERIAL SURFACE - SORTASES AND THE ASSEMBLY OF PILI WITH ISOPEPTIDE BONDS.NATURE REVIEWS MICROBIOLOGY. VOL. 9. ISSUE 3. P. 166 -176 68 57% 96
7 GUO, YC , CAI, SH , GU, GF , GUO, ZW , LONG, ZZ , (2015) RECENT PROGRESS IN THE DEVELOPMENT OF SORTASE A INHIBITORS AS NOVEL ANTI-BACTERIAL VIRULENCE AGENTS.RSC ADVANCES. VOL. 5. ISSUE 62. P. 49880 -49889 51 82% 3
8 ANTOS, JM , TRUTTMANN, MC , PLOEGH, HL , (2016) RECENT ADVANCES IN SORTASE-CATALYZED LIGATION METHODOLOGY.CURRENT OPINION IN STRUCTURAL BIOLOGY. VOL. 38. ISSUE . P. 111 -118 44 77% 2
9 SCHNEEWIND, O , MISSIAKAS, D , (2014) SEC-SECRETION AND SORTASE-MEDIATED ANCHORING OF PROTEINS IN GRAM-POSITIVE BACTERIA.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1687 -1697 72 46% 24
10 MARESSO, AW , SCHNEEWIND, O , (2008) SORTASE AS A TARGET OF ANTI-INFECTIVE THERAPY.PHARMACOLOGICAL REVIEWS. VOL. 60. ISSUE 1. P. 128-141 65 58% 102

Classes with closest relation at Level 1


Rank Class id link
1 5377 COAGGREGATION//STREPTOCOCCUS GORDONII//ANTIGEN I II
2 37689 LIRIOPE PLATYPHYLLA//NCI H716//WELLBEING PROD
3 4763 MOYNE PREVENT MED//STAPHYLOCOCCUS AUREUS//CLUMPING FACTOR A
4 19599 MOL BIOSENSOR IMAGING//FLUOROGEN ACTIVATING PROTEIN//FLUOROGEN
5 4317 STREPTOCOCCUS PNEUMONIAE//PNEUMOLYSIN//PSPA
6 714 STREPTOCOCCUS PYOGENES//GROUP A STREPTOCOCCUS//MOL TRANSLAT HUMAN INFECT DIS
7 13454 VERDOHEME//HEME DEGRADATION//UNITE MEMBRANES BACTERIENNES
8 28802 LOLB//LOLA//LOL SYSTEM
9 11407 STREPTOCOCCUS SUIS//STREPTOCOCCUS SUIS SEROTYPE 2//GRP RECH MALAD INFECT PORC
10 11925 INTEIN//PROTEIN SPLICING//HOMING ENDONUCLEASE

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