Class information for:
Level 1: EF HAND PROTEIN//EF HAND//ONCOMODULIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
16146 670 38.6 61%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
662 3       ANNEXIN//S100A4//S100A9 10529
1750 2             S100A4//S100A9//S100A8 6490
16146 1                   EF HAND PROTEIN//EF HAND//ONCOMODULIN 670

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EF HAND PROTEIN authKW 246316 3% 27% 20
2 EF HAND authKW 182827 6% 10% 39
3 ONCOMODULIN authKW 167089 2% 33% 11
4 SYNTHETIC PEPTIDE ANALOGUE authKW 136722 0% 100% 3
5 CHEM PHYS CHEM 2 address 113930 1% 50% 5
6 PARVALBUMIN authKW 110293 9% 4% 60
7 MG2 LIGATION authKW 91148 0% 100% 2
8 SARCOPLASMIC CALCIUM BINDING PROTEIN authKW 86342 1% 32% 6
9 CA2 BINDING PROTEIN authKW 82884 3% 8% 22
10 CALCIUM BINDING PROTEIN authKW 74717 8% 3% 53

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 6058 76% 0% 510
2 Biophysics 1713 19% 0% 127
3 Biochemical Research Methods 164 6% 0% 41
4 Cell Biology 130 9% 0% 61
5 Spectroscopy 21 2% 0% 15
6 Chemistry, Inorganic & Nuclear 18 3% 0% 20
7 Zoology 10 2% 0% 15
8 Biology 7 2% 0% 11
9 Physiology 4 2% 0% 13
10 Chemistry, Physical 2 5% 0% 32

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHEM PHYS CHEM 2 113930 1% 50% 5
2 HOP CANTONAL DERMATOL CLIN 60764 0% 67% 2
3 MED BIOCHEM BIOPHYS JOHNSON FDN 60764 0% 67% 2
4 ANAL SYNTH SPECIAT ORGANOMET 45574 0% 100% 1
5 BIOCHEM 30 QUAI ERNESTANSERMET 45574 0% 100% 1
6 BIOCHEM BIOPHYS BIOPHYS 45574 0% 100% 1
7 BIOCHIM MUSCULAIRE 45574 0% 100% 1
8 BIOL MOL MB9 45574 0% 100% 1
9 BIOL SCI MONTREAL RD 45574 0% 100% 1
10 CHEM B6 MUSCLE BIOCHEM 45574 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 10718 17% 0% 112
2 PROTEIN SCIENCE 3813 3% 0% 23
3 PROTEIN ENGINEERING 1999 1% 0% 10
4 EUROPEAN JOURNAL OF BIOCHEMISTRY 1903 4% 0% 29
5 CANADIAN JOURNAL OF BIOCHEMISTRY AND CELL BIOLOGY 1468 1% 1% 4
6 JOURNAL OF BIOCHEMISTRY 1063 2% 0% 16
7 BIOSPECTROSCOPY 903 0% 1% 2
8 BIOPHYSICAL CHEMISTRY 856 1% 0% 9
9 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 846 2% 0% 11
10 FEBS LETTERS 840 4% 0% 28

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 EF HAND PROTEIN 246316 3% 27% 20 Search EF+HAND+PROTEIN Search EF+HAND+PROTEIN
2 EF HAND 182827 6% 10% 39 Search EF+HAND Search EF+HAND
3 ONCOMODULIN 167089 2% 33% 11 Search ONCOMODULIN Search ONCOMODULIN
4 SYNTHETIC PEPTIDE ANALOGUE 136722 0% 100% 3 Search SYNTHETIC+PEPTIDE+ANALOGUE Search SYNTHETIC+PEPTIDE+ANALOGUE
5 PARVALBUMIN 110293 9% 4% 60 Search PARVALBUMIN Search PARVALBUMIN
6 MG2 LIGATION 91148 0% 100% 2 Search MG2+LIGATION Search MG2+LIGATION
7 SARCOPLASMIC CALCIUM BINDING PROTEIN 86342 1% 32% 6 Search SARCOPLASMIC+CALCIUM+BINDING+PROTEIN Search SARCOPLASMIC+CALCIUM+BINDING+PROTEIN
8 CA2 BINDING PROTEIN 82884 3% 8% 22 Search CA2+BINDING+PROTEIN Search CA2+BINDING+PROTEIN
9 CALCIUM BINDING PROTEIN 74717 8% 3% 53 Search CALCIUM+BINDING+PROTEIN Search CALCIUM+BINDING+PROTEIN
10 COORDINATION TYPE 68358 0% 50% 3 Search COORDINATION+TYPE Search COORDINATION+TYPE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 GIFFORD, JL , WALSH, MP , VOGEL, HJ , (2007) STRUCTURES AND METAL-ION-BINDING PROPERTIES OF THE CA2+-BINDING HELIX-LOOP-HELIX EF-HAND MOTIFS.BIOCHEMICAL JOURNAL. VOL. 405. ISSUE . P. 199-221 60 36% 337
2 HENZL, MT , AGAH, S , (2006) DIVALENT ION-BINDING PROPERTIES OF THE TWO AVIAN BETA-PARVALBUMINS.PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. VOL. 62. ISSUE 1. P. 270-278 32 89% 13
3 HENZL, MT , AGAH, S , LARSON, JD , (2004) RAT ALPHA- AND BETA-PARVALBUMINS: COMPARISON OF THEIR PENTACARBOXYLATE AND SITE-INTERCONVERSION VARIANTS.BIOCHEMISTRY. VOL. 43. ISSUE 29. P. 9307-9319 29 91% 9
4 HENZL, MT , HAPAK, RC , LIKOS, JJ , (1998) INTERCONVERSION OF THE LIGAND ARRAYS IN THE CD AND EF SITES OF ONCOMODULIN, INFLUENCE ON CA2+-BINDING AFFINITY.BIOCHEMISTRY. VOL. 37. ISSUE 25. P. 9101 -9111 36 84% 16
5 JULENIUS, K , ROBBLEE, J , THULIN, E , FINN, BE , FAIRMAN, R , LINSE, S , (2002) COUPLING OF LIGAND BINDING AND DIMERIZATION OF HELIX-LOOP-HELIX PEPTIDES: SPECTROSCOPIC AND SEDIMENTATION ANALYSES OF CALBINDIN D-9K EF-HANDS.PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. VOL. 47. ISSUE 3. P. 323 -333 31 84% 18
6 PAULS, TL , COX, JA , BERCHTOLD, MW , (1996) THE CA2+-BINDING PROTEINS PARVALBUMIN AND ONCOMODULIN AND THEIR GENES: NEW STRUCTURAL AND FUNCTIONAL FINDINGS.BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION. VOL. 1306. ISSUE 1. P. 39-54 57 45% 100
7 REVETT, SP , KING, G , SHABANOWITZ, J , HUNT, DF , HARTMAN, KL , LAUE, TM , NELSON, DJ , (1997) CHARACTERIZATION OF A HELIX-LOOP-HELIX (EF HAND) MOTIF OF SILVER HAKE PARVALBUMIN ISOFORM B.PROTEIN SCIENCE. VOL. 6. ISSUE 11. P. 2397-2408 38 73% 11
8 TAN, AM , MARKUS, LA , HENZL, MT , (2010) DISPARATE IMPACT OF THE S33V MUTATION ON CONFORMATIONAL STABILITY IN RAT BETA-PARVALBUMIN (ONCOMODULIN) AND CHICKEN PARVALBUMIN 3.JOURNAL OF PHYSICAL CHEMISTRY B. VOL. 114. ISSUE 49. P. 16171-16183 25 74% 0
9 HENZL, MT , DAVIS, ME , TAN, AM , (2008) LEUCINE 85 IS AN IMPORTANT DETERMINANT OF DIVALENT ION AFFINITY IN RAT BETA-PARVALBUMIN (ONCOMODULIN).BIOCHEMISTRY. VOL. 47. ISSUE 51. P. 13635-13646 20 91% 9
10 HENZL, MT , AGAH, S , LARSON, JD , (2004) ASSOCIATION OF THE AB AND CD-EF DOMAINS FROM RAT ALPHA- AND BETA-PARVALBUMIN.BIOCHEMISTRY. VOL. 43. ISSUE 34. P. 10906-10917 24 83% 15

Classes with closest relation at Level 1


Rank Class id link
1 1576 CALMODULIN//DIPHENYLALKYLAMINES//PHOSPHOCALMODULIN
2 8452 CALCIUM BINDING PROTEIN//CALBINDIN D28K//CALRETININ
3 26991 DRUG DESIGN BIOTECHNOL//METAL BINDING RESIDUES//METAL CATIONS M2
4 30366 CALMODULIN LIKE PROTEIN//ACRAB MULTIDRUG PUMP//AEQUORIN RECONSTITUTION
5 1190 TROPONIN C//TROPOMYOSIN//TROPONIN
6 13835 FISH ALLERGY//TROPOMYOSIN//FISH ALLERGENS
7 13019 UNIT REGULATORY MOL BIOL//NCS 1//RECOVERIN
8 3263 S100A4//S100P//S100A6
9 17450 CENTRIN//CALTRACTIN//SPASMONEME
10 25252 ISOTHERMAL TITRATION CALORIMETRY//ITC//CALORIMETRIC ENTHALPY

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