Class information for:
Level 1: METABOLITE ANNOTATION//SCRIPPS METABOL MASS SPE OMETRY//ST S DEV BIOL

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
13921 805 39.1 80%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
157 3       JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//BIOCHEMICAL RESEARCH METHODS//INTERNATIONAL JOURNAL OF MASS SPECTROMETRY 61558
1485 2             METABOLOMICS//METABONOMICS//METABOLIC PROFILING 7631
13921 1                   METABOLITE ANNOTATION//SCRIPPS METABOL MASS SPE OMETRY//ST S DEV BIOL 805

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 METABOLITE ANNOTATION authKW 303446 1% 100% 8
2 SCRIPPS METABOL MASS SPE OMETRY address 254970 1% 61% 11
3 ST S DEV BIOL address 164232 3% 18% 24
4 METABOLOMICS authKW 153815 19% 3% 150
5 CLIN BIOMARKERS address 142949 2% 27% 14
6 FRAGMENTATION TREES authKW 113792 0% 100% 3
7 KNAPSACK FAMILY authKW 113792 0% 100% 3
8 RELATIVE ISOTOPIC ABUNDANCE authKW 113792 0% 100% 3
9 SPECIES METABOLITE RELATIONSHIP authKW 113792 0% 100% 3
10 COMPOUND IDENTIFICATION authKW 87769 1% 26% 9

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemical Research Methods 8021 33% 0% 269
2 Chemistry, Analytical 7998 43% 0% 344
3 Mathematical & Computational Biology 4178 13% 0% 108
4 Spectroscopy 1431 12% 0% 97
5 Biotechnology & Applied Microbiology 968 16% 0% 127
6 Plant Sciences 292 10% 0% 79
7 Endocrinology & Metabolism 180 7% 0% 56
8 Chemistry, Medicinal 127 4% 0% 36
9 Computer Science, Interdisciplinary Applications 42 3% 0% 21
10 Biochemistry & Molecular Biology 23 9% 0% 76

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SCRIPPS METABOL MASS SPE OMETRY 254970 1% 61% 11
2 ST S DEV BIOL 164232 3% 18% 24
3 CLIN BIOMARKERS 142949 2% 27% 14
4 METABOLOME INFORMAT UNIT 75861 0% 100% 2
5 SCRIPPS METABOL 68273 0% 60% 3
6 PROF L WILLMITZER 56893 0% 50% 3
7 CHAIR BIOINFORMAT 54619 1% 13% 11
8 CHIM BIOL ORGAN STRUCT 50573 0% 67% 2
9 OURCES INTEGRAT BIOL 50573 0% 67% 2
10 GRONINGEN BIOINFORMAT 43198 2% 8% 14

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 METABOLOMICS 108400 7% 5% 53
2 ANALYTICAL CHEMISTRY 18722 17% 0% 133
3 BIOINFORMATICS 11518 7% 1% 57
4 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 6834 4% 1% 29
5 BMC BIOINFORMATICS 4814 4% 0% 31
6 RAPID COMMUNICATIONS IN MASS SPECTROMETRY 4587 4% 0% 33
7 PLANT BIOTECHNOLOGY 3559 1% 1% 8
8 JOURNAL OF CHEMINFORMATICS 2639 1% 1% 5
9 NATURAL PRODUCT REPORTS 2164 1% 1% 9
10 LC GC NORTH AMERICA 1825 1% 1% 8

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 METABOLITE ANNOTATION 303446 1% 100% 8 Search METABOLITE+ANNOTATION Search METABOLITE+ANNOTATION
2 METABOLOMICS 153815 19% 3% 150 Search METABOLOMICS Search METABOLOMICS
3 FRAGMENTATION TREES 113792 0% 100% 3 Search FRAGMENTATION+TREES Search FRAGMENTATION+TREES
4 KNAPSACK FAMILY 113792 0% 100% 3 Search KNAPSACK+FAMILY Search KNAPSACK+FAMILY
5 RELATIVE ISOTOPIC ABUNDANCE 113792 0% 100% 3 Search RELATIVE+ISOTOPIC+ABUNDANCE Search RELATIVE+ISOTOPIC+ABUNDANCE
6 SPECIES METABOLITE RELATIONSHIP 113792 0% 100% 3 Search SPECIES+METABOLITE+RELATIONSHIP Search SPECIES+METABOLITE+RELATIONSHIP
7 COMPOUND IDENTIFICATION 87769 1% 26% 9 Search COMPOUND+IDENTIFICATION Search COMPOUND+IDENTIFICATION
8 AUTOMATIC CHROMATOGRAPHIC PEAK DETECTION 75861 0% 100% 2 Search AUTOMATIC+CHROMATOGRAPHIC+PEAK+DETECTION Search AUTOMATIC+CHROMATOGRAPHIC+PEAK+DETECTION
9 COMBINED PROFILING 75861 0% 100% 2 Search COMBINED+PROFILING Search COMBINED+PROFILING
10 COMPARATIVE METABOLOME ANALYSIS 75861 0% 100% 2 Search COMPARATIVE+METABOLOME+ANALYSIS Search COMPARATIVE+METABOLOME+ANALYSIS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 SCHEUBERT, K , HUFSKY, F , BOCKER, S , (2013) COMPUTATIONAL MASS SPECTROMETRY FOR SMALL MOLECULES.JOURNAL OF CHEMINFORMATICS. VOL. 5. ISSUE . P. - 103 50% 28
2 MISRA, BB , VAN DER HOOFT, JJJ , (2016) UPDATES IN METABOLOMICS TOOLS AND RESOURCES: 2014-2015.ELECTROPHORESIS. VOL. 37. ISSUE 1. P. 86 -110 61 40% 12
3 VINAIXA, M , SCHYMANSKI, EL , NEUMANN, S , NAVARRO, M , SALEK, RM , YANES, O , (2016) MASS SPECTRAL DATABASES FOR LC/MS- AND GC/MS-BASED METABOLOMICS: STATE OF THE FIELD AND FUTURE PROSPECTS.TRAC-TRENDS IN ANALYTICAL CHEMISTRY. VOL. 78. ISSUE . P. 23 -35 40 52% 12
4 UPPAL, K , WALKER, DI , LIU, K , LI, SZ , GO, YM , JONES, DP , (2016) COMPUTATIONAL METABOLOMICS: A FRAMEWORK FOR THE MILLION METABOLOME.CHEMICAL RESEARCH IN TOXICOLOGY. VOL. 29. ISSUE 12. P. 1956 -1975 63 48% 0
5 YI, LZ , DONG, NP , YUN, YH , DENG, BC , REN, DB , LIU, S , LIANG, YZ , (2016) CHEMOMETRIC METHODS IN DATA PROCESSING OF MASS SPECTROMETRY-BASED METABOLOMICS: A REVIEW.ANALYTICA CHIMICA ACTA. VOL. 914. ISSUE . P. 17 -34 67 34% 4
6 RATHAHAO-PARIS, E , ALVES, S , JUNOT, C , TABET, JC , (2016) HIGH RESOLUTION MASS SPECTROMETRY FOR STRUCTURAL IDENTIFICATION OF METABOLITES IN METABOLOMICS.METABOLOMICS. VOL. 12. ISSUE 1. P. - 50 43% 4
7 HUFSKY, F , SCHEUBERT, K , BOCKER, S , (2014) COMPUTATIONAL MASS SPECTROMETRY FOR SMALL-MOLECULE FRAGMENTATION.TRAC-TRENDS IN ANALYTICAL CHEMISTRY. VOL. 53. ISSUE . P. 41-48 31 70% 23
8 DUHRKOP, K , SHEN, HB , MEUSEL, M , ROUSU, J , BOCKER, S , (2015) SEARCHING MOLECULAR STRUCTURE DATABASES WITH TANDEM MASS SPECTRA USING CSI:FINGERID.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 112. ISSUE 41. P. 12580 -12585 28 65% 20
9 VANIYA, A , FIEHN, O , (2015) USING FRAGMENTATION TREES AND MASS SPECTRAL TREES FOR IDENTIFYING UNKNOWN COMPOUNDS IN METABOLOMICS.TRAC-TRENDS IN ANALYTICAL CHEMISTRY. VOL. 69. ISSUE . P. 52 -61 34 51% 22
10 DUNN, WB , ERBAN, A , WEBER, RJM , CREEK, DJ , BROWN, M , BREITLING, R , HANKEMEIER, T , GOODACRE, R , NEUMANN, S , KOPKA, J , ET AL (2013) MASS APPEAL: METABOLITE IDENTIFICATION IN MASS SPECTROMETRY-FOCUSED UNTARGETED METABOLOMICS.METABOLOMICS. VOL. 9. ISSUE 1. P. S44-S66 46 38% 46

Classes with closest relation at Level 1


Rank Class id link
1 333 METABONOMICS//METABOLOMICS//METABOLIC PROFILING
2 19696 VETERINARY DRUGS//PESTICIDES WATER//MULTICLASS ANALYSIS
3 14322 METABOLOMICS//SECT METABOL//SECT METABOLOM
4 10338 METABOLIC FLUX ANALYSIS//METAB ENGN SYST BIOL//RAPID SAMPLING
5 12542 REACTIVE METABOLITES//METABOLITE IDENTIFICATION//PHARMACOKINET DYNAM METAB
6 1508 PEPTIDE IDENTIFICATION//JOURNAL OF PROTEOME RESEARCH//PROTEIN IDENTIFICATION
7 35632 CICECO CHEM//MAT BISSAYA BARRETO//PRENATAL DISORDERS
8 13903 SYSTEMATIC TOXICOLOGICAL ANALYSIS//GENERAL UNKNOWN SCREENING//TANDEM MASS SPECTRAL LIBRARY
9 35109 FUZZY RULE BUILDING EXPERT SYSTEM//INTELLIGENT CHEM RUMENTAT//ANOVA PCA
10 5812 JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES//COMPUTER ASSISTED STRUCTURE ELUCIDATION//ANALYTICA CHIMICA ACTA-COMPUTER TECHNIQUES AND OPTIMIZATION

Go to start page