Class information for:
Level 1: B CELL EPITOPE PREDICTION//PREDETERMINED SPECIFICITY//SYNTHETIC ANTIGENIC SITE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
13376 841 32.9 58%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
494 3       AVIAN DISEASES//AVIAN PATHOLOGY//NEWCASTLE DISEASE VIRUS 22905
1525 2             ADJUVANT//ISCOM//VACCINE 7477
13376 1                   B CELL EPITOPE PREDICTION//PREDETERMINED SPECIFICITY//SYNTHETIC ANTIGENIC SITE 841

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 B CELL EPITOPE PREDICTION authKW 197668 1% 78% 7
2 PREDETERMINED SPECIFICITY authKW 181535 1% 100% 5
3 SYNTHETIC ANTIGENIC SITE authKW 181535 1% 100% 5
4 BIOL MOLEC CELLULAIRE IMMUNOCHIM address 72614 0% 100% 2
5 EQUIPE MODELISAT SIMULAT ACIDES NUCL address 72614 0% 100% 2
6 PEPTIDE PROTEIN CROSS REACTIVITY authKW 72614 0% 100% 2
7 EPITOPE PREDICTION authKW 64085 2% 13% 14
8 STRUCTURAL ENERGETICS authKW 40842 0% 38% 3
9 ABCPRED authKW 36307 0% 100% 1
10 ACTIVE SITE BINDING SITE EPITOPE MAPPING authKW 36307 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Immunology 4090 34% 0% 286
2 Biochemistry & Molecular Biology 2429 45% 0% 382
3 Biochemical Research Methods 1526 15% 0% 125
4 Mathematical & Computational Biology 770 6% 0% 49
5 Biotechnology & Applied Microbiology 460 11% 0% 94
6 Biophysics 248 7% 0% 61
7 Virology 221 4% 0% 37
8 Biology 175 5% 0% 40
9 Computer Science, Interdisciplinary Applications 39 2% 0% 21
10 Medicine, Research & Experimental 33 4% 0% 30

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOL MOLEC CELLULAIRE IMMUNOCHIM 72614 0% 100% 2
2 EQUIPE MODELISAT SIMULAT ACIDES NUCL 72614 0% 100% 2
3 BIOCHEM 1 BAYLOR PLAZA 36307 0% 100% 1
4 BIOCHEM SCI GRP 36307 0% 100% 1
5 CHEM SCI SCI ENGN 36307 0% 100% 1
6 CONSEJO INVEST CIENTIF TECN UNSAM CONICET 36307 0% 100% 1
7 DPTO QUIM ANALIT CIENCIAS BIOQUIM FARMACEUT 36307 0% 100% 1
8 EM NURSING UNIT 36307 0% 100% 1
9 FEDERATIF RECH FR53 36307 0% 100% 1
10 GENT DIAG CHINESE PLA 36307 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR IMMUNOLOGY 30591 9% 1% 77
2 JOURNAL OF IMMUNOGENETICS 18938 2% 3% 16
3 JOURNAL OF PROTEIN CHEMISTRY 11727 3% 1% 22
4 IMMUNOLOGICAL COMMUNICATIONS 10693 1% 4% 8
5 JOURNAL OF IMMUNOLOGICAL METHODS 7241 5% 0% 44
6 JOURNAL OF MOLECULAR RECOGNITION 2961 1% 1% 10
7 BMC BIOINFORMATICS 1903 2% 0% 20
8 BIOORGANICHESKAYA KHIMIYA 1584 1% 0% 12
9 IMMUNOLOGICAL INVESTIGATIONS 1570 1% 1% 8
10 PEPTIDE RESEARCH 1479 0% 1% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 B CELL EPITOPE PREDICTION 197668 1% 78% 7 Search B+CELL+EPITOPE+PREDICTION Search B+CELL+EPITOPE+PREDICTION
2 PREDETERMINED SPECIFICITY 181535 1% 100% 5 Search PREDETERMINED+SPECIFICITY Search PREDETERMINED+SPECIFICITY
3 SYNTHETIC ANTIGENIC SITE 181535 1% 100% 5 Search SYNTHETIC+ANTIGENIC+SITE Search SYNTHETIC+ANTIGENIC+SITE
4 PEPTIDE PROTEIN CROSS REACTIVITY 72614 0% 100% 2 Search PEPTIDE+PROTEIN+CROSS+REACTIVITY Search PEPTIDE+PROTEIN+CROSS+REACTIVITY
5 EPITOPE PREDICTION 64085 2% 13% 14 Search EPITOPE+PREDICTION Search EPITOPE+PREDICTION
6 STRUCTURAL ENERGETICS 40842 0% 38% 3 Search STRUCTURAL+ENERGETICS Search STRUCTURAL+ENERGETICS
7 ABCPRED 36307 0% 100% 1 Search ABCPRED Search ABCPRED
8 ACTIVE SITE BINDING SITE EPITOPE MAPPING 36307 0% 100% 1 Search ACTIVE+SITE+BINDING+SITE+EPITOPE+MAPPING Search ACTIVE+SITE+BINDING+SITE+EPITOPE+MAPPING
9 ADAPTIVE AFFINITY MATURATION 36307 0% 100% 1 Search ADAPTIVE+AFFINITY+MATURATION Search ADAPTIVE+AFFINITY+MATURATION
10 ALPHA ALPHA DISUBSTITUTED RESIDUES 36307 0% 100% 1 Search ALPHA+ALPHA+DISUBSTITUTED+RESIDUES Search ALPHA+ALPHA+DISUBSTITUTED+RESIDUES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 JU, HX , LIU, ZB , NING, Q , ZHANG, J , ZHAO, XW , HUANG, YX , MA, ZQ , LI, YX , SUN, PP , (2013) BIOINFORMATICS RESOURCES AND TOOLS FOR CONFORMATIONAL B-CELL EPITOPE PREDICTION.COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE. VOL. . ISSUE . P. - 38 68% 0
2 POTOCNAKOVA, L , BHIDE, M , PULZOVA, LB , (2016) AN INTRODUCTION TO B-CELL EPITOPE MAPPING AND IN SILICO EPITOPE PREDICTION.JOURNAL OF IMMUNOLOGY RESEARCH. VOL. . ISSUE . P. - 43 53% 0
3 ZHANG, CH , SUN, BJ , TANG, WN , SUN, PP , MA, ZQ , (2016) PREDICTION OF CONFORMATIONAL B-CELL EPITOPE BINDING WITH INDIVIDUAL ANTIBODIES USING PHAGE DISPLAY PEPTIDES.INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE. VOL. 9. ISSUE 2. P. 2748 -2757 24 77% 0
4 ZHENG, W , RUAN, JS , HU, G , WANG, K , HANLON, M , GAO, JZ , (2015) ANALYSIS OF CONFORMATIONAL B-CELL EPITOPES IN THE ANTIBODY-ANTIGEN COMPLEX USING THE DEPTH FUNCTION AND THE CONVEX HULL.PLOS ONE. VOL. 10. ISSUE 8. P. - 31 60% 0
5 SUN, PP , QI, JL , ZHAO, YZ , HUANG, YX , YANG, GF , MA, ZQ , LI, YX , (2016) A NOVEL CONFORMATIONAL B-CELL EPITOPE PREDICTION METHOD BASED ON MIMOTOPE AND PATCH ANALYSIS.JOURNAL OF THEORETICAL BIOLOGY. VOL. 394. ISSUE . P. 102 -108 22 81% 0
6 ZHENG, W , ZHANG, C , HANLON, M , RUAN, JS , GAO, JZ , (2014) AN ENSEMBLE METHOD FOR PREDICTION OF CONFORMATIONAL B-CELL EPITOPES FROM ANTIGEN SEQUENCES.COMPUTATIONAL BIOLOGY AND CHEMISTRY. VOL. 49. ISSUE . P. 51 -58 25 69% 4
7 ATASSI, MZ , (1984) ANTIGENIC STRUCTURES OF PROTEINS - THEIR DETERMINATION HAS REVEALED IMPORTANT ASPECTS OF IMMUNE RECOGNITION AND GENERATED STRATEGIES FOR SYNTHETIC MIMICKING OF PROTEIN-BINDING SITES.EUROPEAN JOURNAL OF BIOCHEMISTRY. VOL. 145. ISSUE 1. P. 1-20 45 85% 192
8 DALKAS, GA , TEHEUX, F , KWASIGROCH, JM , ROOMAN, M , (2014) CATION-PI, AMINO-PI, PI-PI, AND H-BOND INTERACTIONS STABILIZE ANTIGEN-ANTIBODY INTERFACES.PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. VOL. 82. ISSUE 9. P. 1734 -1746 30 50% 6
9 SELA-CULANG, I , OFRAN, Y , PETERS, B , (2015) ANTIBODY SPECIFIC EPITOPE PREDICTION - EMERGENCE OF A NEW PARADIGM.CURRENT OPINION IN VIROLOGY. VOL. 11. ISSUE . P. 98 -102 23 62% 4
10 YAO, B , ZHENG, DD , LIANG, SD , ZHANG, C , (2013) CONFORMATIONAL B-CELL EPITOPE PREDICTION ON ANTIGEN PROTEIN STRUCTURES: A REVIEW OF CURRENT ALGORITHMS AND COMPARISON WITH COMMON BINDING SITE PREDICTION METHODS.PLOS ONE. VOL. 8. ISSUE 4. P. - 19 73% 23

Classes with closest relation at Level 1


Rank Class id link
1 8251 CANONICAL STRUCTURES//ANTIBODY MODELING//HUMANIZATION
2 33873 MASS SPECTROMETRIC EPITOPE MAPPING//RA33 AUTOANTIGEN//PEPTIDE CHIP ANALYSIS
3 22255 GRP PEPTIDE CHEM//PEPTIDE PROT CHEM//PHYSICOCHEM UNIT
4 10486 IMMUNOINFORMATICS//EPITOPE PREDICTION//COMPUTATIONAL VACCINOLOGY
5 24071 CONSENSUS EPITOPE//ENHANCING MONOCLONAL ANTIBODIES//GH CONCENTRATION
6 37470 SEQUENCE UNIQUENESS//BIOCHEM MOL BIOL ERNESTO QUAGLIARIELLO//SIMILARITY LEVEL
7 24974 PS TAG//1 FLUORO 2 NITRO 4 AZIDOBENZENE//AFFINITY PEPTIDE TAG
8 26280 RIBOFLAVIN CARRIER PROTEIN//RIBOFLAVIN BINDING PROTEIN//CHICKEN RIBOFLAVIN CARRIER PROTEIN
9 30894 VALENCE TOPOLOGICAL CHARGE TRANSFER INDEX//UNIV CIENCIA MOL//ELLIPTICAL DEFORMATION
10 34945 HGP 30//MATRIX PROTEIN P17//HIV 1 MATRIX PROTEIN P17

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